UHGV-0002838 (vOTU-020681)

Viral Genome: UHGV-0002838

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0002838
vOTU ID	vOTU-020681
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_B_8_2155__NODE_947_length_43142_cov_5.170858_1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	81.96 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9813
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	54.01
Jumbo phage	No

Genome content
Genome length (bp)	37,119
GC content	43.53%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	92%
Average CDS length (bps)	599.79
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 81.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0002838_1	phrog_9589	51.5	0.000000000000027	endolysin	lysis
UniRef90	UHGV-0002838_1	UniRef90_UPI001D05F489	516.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0002838_1	411459.RUMOBE_01085	306.0	0	N/A	N/A
Pfam	UHGV-0002838_1	PF05257	N/A	N/A	CHAP domain	CHAP
structural_annotation	UHGV-0002838_1	PF08230,PF19087	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_2	phrog_6616	569.9	0	tail protein	tail
UniRef90	UHGV-0002838_2	UniRef90_A0A395X7B3	906.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0002838_2	33035.JPJF01000043_gene1002	262.0	0	N/A	N/A
structural_annotation	UHGV-0002838_2	PF05113,PF18432,NF033848,NF011735,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002838_3	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_4	phrog_1535	491.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0002838_4	UniRef90_A0A1C5PIN9	487.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0002838_4	476272.RUMHYD_01785	479.0	0	phage tail tape measure protein	N/A
COG	UHGV-0002838_4	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002838_4	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_5	phrog_706	123.9	1.3e-36	N/A	unknown function
UniRef90	UHGV-0002838_5	UniRef90_UPI001BAD00AD	198.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0002838_5	411459.RUMOBE_01383	323.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0002838_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0002838_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_6	phrog_11299	70.1	3.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0002838_6	33035.JPJF01000106_gene3125	59.7	0.00000000226	N/A	N/A
structural_annotation	UHGV-0002838_6	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_7	phrog_3099	140.4	9.99967e-42	N/A	unknown function
eggNOG-mapper	UHGV-0002838_7	411902.CLOBOL_00129	171.0	0	N/A	N/A
structural_annotation	UHGV-0002838_7	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_8	phrog_3266	90.4	1.4e-26	tail completion	connector
eggNOG-mapper	UHGV-0002838_8	476272.RUMHYD_01781	136.0	1.33e-38	N/A	N/A
structural_annotation	UHGV-0002838_8	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_9	phrog_3366	105.6	3.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0002838_9	476272.RUMHYD_01779	134.0	4.59e-38	N/A	N/A
structural_annotation	UHGV-0002838_9	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_10	phrog_8680	236.3	0	N/A	unknown function
UniRef90	UHGV-0002838_10	UniRef90_UPI001C0F342A	425.0	0	N/A	N/A
eggNOG-mapper	UHGV-0002838_10	411470.RUMGNA_02208	272.0	0	N/A	N/A
Pfam	UHGV-0002838_10	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0002838_10	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_11	phrog_9479	145.8	2.00386e-43	N/A	unknown function
structural_annotation	UHGV-0002838_11	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_12	phrog_1129	73.6	1.9e-21	holin	lysis
UniRef90	UHGV-0002838_12	UniRef90_UPI001C0EA78A	171.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0002838_12	411461.DORFOR_00721	114.0	2.51e-32	N/A	N/A
Pfam	UHGV-0002838_12	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0002838_12	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_13	phrog_355	53.4	0.0000000000000045	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002838_13	UniRef90_A0A415G5B2	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0002838_13	397290.C810_05229	181.0	0	N/A	N/A
structural_annotation	UHGV-0002838_13	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_14	phrog_918	129.0	1.1e-38	N/A	unknown function
UniRef90	UHGV-0002838_14	UniRef90_UPI0004D82A84	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-0002838_14	357809.Cphy_2966	154.0	0	N/A	N/A
Pfam	UHGV-0002838_14	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0002838_14	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_16	phrog_541	89.7	1.6e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0002838_16	476272.RUMHYD_01778	104.0	2.55e-26	N/A	N/A
PHROG	UHGV-0002838_17	phrog_247	233.8	0	major head protein	head and packaging
UniRef90	UHGV-0002838_17	UniRef90_UPI001BA5448B	288.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0002838_17	33035.JPJF01000106_gene3132	551.0	0	N/A	N/A
structural_annotation	UHGV-0002838_17	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_18	phrog_194	63.4	3e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-0002838_18	UniRef90_UPI001C0EBA51	121.0	4.18e-29	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0002838_18	476272.RUMHYD_01775	175.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0002838_18	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
UniRef90	UHGV-0002838_19	UniRef90_UPI001C0EBD45	189.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0002838_19	476272.RUMHYD_01766	120.0	3.06e-34	N/A	N/A
PHROG	UHGV-0002838_20	phrog_581	249.1	0	minor head protein	head and packaging
UniRef90	UHGV-0002838_20	UniRef90_UPI001C0EDE82	739.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0002838_20	476272.RUMHYD_01761	172.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0002838_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0002838_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002838_20	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_21	phrog_556	76.5	2.4e-22	minor head protein	head and packaging
UniRef90	UHGV-0002838_21	UniRef90_UPI001C0ECC47	212.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0002838_21	665956.HMPREF1032_03062	95.1	6.94e-23	Minor capsid protein	N/A
Pfam	UHGV-0002838_21	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0002838_21	PF11114	N/A	N/A	N/A	N/A
KOfam	UHGV-0002838_22	K03651	46.3	0.00000000000059	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
PHROG	UHGV-0002838_22	phrog_7158	131.9	2.9e-39	N/A	unknown function
UniRef90	UHGV-0002838_22	UniRef90_UPI000F0AFADB	120.0	8.55e-26	metallophosphoesterase	N/A
eggNOG-mapper	UHGV-0002838_22	1501230.ET33_05810	81.6	0.0000000000000892	Calcineurin-like phosphoesterase	N/A
Pfam	UHGV-0002838_22	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
structural_annotation	UHGV-0002838_22	PF12850,PF10014,MF_00905,NF008359,COG5555	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_23	phrog_215	45.0	0.0000000000017	structural protein with Ig domain	head and packaging
UniRef90	UHGV-0002838_23	UniRef90_UPI001C0E93C5	104.0	1.56e-21	Ig-like domain-containing protein	N/A
Pfam	UHGV-0002838_23	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0002838_23	COG4085	N/A	N/A	DNA/RNA endonuclease YhcR, contains UshA esterase domain	N/A
PHROG	UHGV-0002838_24	phrog_533	275.9	0	portal protein	head and packaging
UniRef90	UHGV-0002838_24	UniRef90_A0A1C6CDM8	656.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0002838_24	33035.JPJF01000106_gene3135	516.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0002838_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0002838_26	K06909	333.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0002838_26	phrog_3717	161.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0002838_26	UniRef90_A0A395X9V4	813.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0002838_26	33035.JPJF01000106_gene3136	402.0	0	Terminase small subunit	N/A
Pfam	UHGV-0002838_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0002838_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0002838_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0002838_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0002838_27	K07474	103.7	3.5e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0002838_27	phrog_51	115.7	3.9e-34	terminase small subunit	head and packaging
UniRef90	UHGV-0002838_27	UniRef90_A0A416ZL36	161.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0002838_27	476272.RUMHYD_01754	141.0	1.43997e-41	Terminase small subunit	N/A
Pfam	UHGV-0002838_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0002838_27	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0002838_27	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_28	phrog_33130	112.0	1.8e-33	N/A	unknown function
structural_annotation	UHGV-0002838_28	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0002838_29	K22300	49.1	0.00000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0002838_29	phrog_8	48.0	0.0000000000003	transcriptional regulator	transcription regulation
UniRef90	UHGV-0002838_29	UniRef90_A0A414EGC7	98.6	8.31e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0002838_29	883081.HMPREF9698_00677	49.7	0.0000017	sequence-specific DNA binding	N/A
Pfam	UHGV-0002838_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0002838_29	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0002838_29	PF01381,NF041575,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002838_30	397288.C806_00098	57.4	0.0000000228	N/A	N/A
PHROG	UHGV-0002838_33	phrog_8684	92.3	2.1e-27	N/A	unknown function
UniRef90	UHGV-0002838_33	UniRef90_G5HEN9	147.0	5.38099e-43	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0002838_33	742733.HMPREF9469_00912	147.0	8.96831e-44	YopX protein	N/A
Pfam	UHGV-0002838_33	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0002838_33	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0002838_33	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002838_34	397290.C810_01505	132.0	6.25e-39	N/A	N/A
PHROG	UHGV-0002838_35	phrog_20593	53.3	0.0000000000000036	N/A	unknown function
PHROG	UHGV-0002838_39	phrog_15198	45.7	0.00000000000075	N/A	unknown function
UniRef90	UHGV-0002838_39	UniRef90_K1T9Q6	149.0	7.00649e-45	N/A	N/A
Pfam	UHGV-0002838_39	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0002838_41	phrog_4601	42.9	0.0000000000062	N/A	unknown function
structural_annotation	UHGV-0002838_41	PF17888	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_43	phrog_463	195.6	0	anti-repressor	transcription regulation
UniRef90	UHGV-0002838_43	UniRef90_A0A3A6GZT3	329.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-0002838_43	411490.ANACAC_00813	254.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0002838_43	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0002838_43	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0002838_43	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0002838_43	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002838_45	UniRef90_UPI000E47F582	139.0	8.36996e-42	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0002838_45	97139.C824_02817	85.5	4.18e-21	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0002838_45	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0002838_45	PF13560,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_46	phrog_4601	40.3	0.00000000003	N/A	unknown function
PHROG	UHGV-0002838_47	phrog_17690	140.5	4.90034e-42	N/A	unknown function
eggNOG-mapper	UHGV-0002838_47	476272.RUMHYD_03925	206.0	0	N/A	N/A
KOfam	UHGV-0002838_49	K02315	136.4	2.69999e-40	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0002838_49	phrog_50	133.3	2.2e-39	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002838_49	UniRef90_UPI001D06D025	514.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0002838_49	397291.C804_01604	245.0	0	Bacterial dnaA protein	N/A
Pfam	UHGV-0002838_49	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0002838_49	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0002838_49	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_50	phrog_10469	105.3	6.5e-32	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002838_50	UniRef90_A0A174WT25	262.0	0	Replication initiator A domain-containing protein	N/A
eggNOG-mapper	UHGV-0002838_50	97138.C820_00775	174.0	0	DnaD domain protein	N/A
COG	UHGV-0002838_50	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0002838_50	PF10771,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_51	phrog_244	67.2	3.5e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0002838_51	33035.JPJF01000122_gene2460	167.0	0	N/A	N/A
structural_annotation	UHGV-0002838_51	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0002838_52	K07455	284.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0002838_52	phrog_148	279.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002838_52	UniRef90_A0A415L5D0	499.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0002838_52	658088.HMPREF0987_00529	365.0	0	RecT family	N/A
Pfam	UHGV-0002838_52	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0002838_52	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0002838_52	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0002838_52	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0002838_53	phrog_434	337.1	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002838_53	UniRef90_A0A415L5E5	572.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0002838_53	97139.C824_05807	364.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0002838_53	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0002838_53	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0002838_53	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0002838_53	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002838_56	UniRef90_UPI0015705952	125.0	3.97e-36	toxin HipA	N/A
eggNOG-mapper	UHGV-0002838_56	478749.BRYFOR_05417	63.5	0.00000000000241	N/A	N/A