UHGV-0003687 (vOTU-042509)

Viral Genome: UHGV-0003687

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0003687
vOTU ID	vOTU-042509
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_D_12_1182__NODE_1796_length_52341_cov_18.124751_1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9783
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.24
Jumbo phage	No

Genome content
Genome length (bp)	38,938
GC content	48.83%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	95%
Average CDS length (bps)	649.95
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0003687_1	K11062	111.5	8.2e-33	entD; probable enterotoxin D	N/A
PHROG	UHGV-0003687_1	phrog_3088	154.0	1.4013e-45	amidase	lysis
UniRef90	UHGV-0003687_1	UniRef90_A0A7G9G8L8	306.0	0	Amidase	N/A
eggNOG-mapper	UHGV-0003687_1	397288.C806_00054	263.0	0	Ami_2	N/A
Pfam	UHGV-0003687_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0003687_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0003687_1	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0003687_1	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_2	phrog_355	59.8	4.5e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003687_2	UniRef90_UPI0018A09237	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-0003687_2	397290.C810_05229	160.0	0	N/A	N/A
Pfam	UHGV-0003687_2	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0003687_2	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_3	phrog_199	77.3	1.8e-22	holin	lysis
UniRef90	UHGV-0003687_3	UniRef90_A0A3R6Q4W7	194.0	0	Holin	N/A
eggNOG-mapper	UHGV-0003687_3	411461.DORFOR_01186	183.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0003687_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0003687_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0003687_3	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0003687_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0003687_4	1235798.C817_04596	107.0	8.83e-22	the current gene model (or a revised gene model) may contain a frame shift	N/A
COG	UHGV-0003687_4	COG4675	N/A	N/A	Phage tail collar domain	N/A
UniRef90	UHGV-0003687_5	UniRef90_R7KBG5	53.1	0.00000337	Conserved domain protein	N/A
PHROG	UHGV-0003687_6	phrog_372	229.9	0	tail protein	tail
UniRef90	UHGV-0003687_6	UniRef90_A0A1C5RHT6	218.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-0003687_6	1235796.C815_00905	162.0	6.29e-39	N/A	N/A
Pfam	UHGV-0003687_6	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0003687_6	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_7	phrog_16267	192.3	0	N/A	unknown function
UniRef90	UHGV-0003687_7	UniRef90_UPI001C10B551	308.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0003687_7	1294142.CINTURNW_1706	323.0	0	Phage minor structural protein	N/A
COG	UHGV-0003687_7	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0003687_7	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_8	phrog_1401	62.2	8.9e-18	N/A	unknown function
UniRef90	UHGV-0003687_8	UniRef90_UPI000A16CD19	65.1	0.0000000000607	N/A	N/A
eggNOG-mapper	UHGV-0003687_8	1294142.CINTURNW_1041	82.8	1.34e-18	N/A	N/A
structural_annotation	UHGV-0003687_8	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_9	phrog_1194	64.8	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0003687_9	33035.JPJF01000093_gene2242	159.0	0	N/A	N/A
structural_annotation	UHGV-0003687_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_10	phrog_1535	330.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0003687_10	UniRef90_A0A1C6JZ05	611.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0003687_10	33035.JPJF01000093_gene2243	742.0	0	phage tail tape measure protein	N/A
COG	UHGV-0003687_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0003687_10	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_11	phrog_8355	112.4	1.2e-33	N/A	unknown function
UniRef90	UHGV-0003687_11	UniRef90_UPI001F1300CC	161.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0003687_11	742740.HMPREF9474_03513	106.0	2.21e-28	N/A	N/A
Pfam	UHGV-0003687_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0003687_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_12	phrog_8300	105.1	4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0003687_12	33035.JPJF01000093_gene2245	123.0	1.61e-35	N/A	N/A
structural_annotation	UHGV-0003687_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_13	phrog_820	116.0	2e-34	major tail protein	tail
eggNOG-mapper	UHGV-0003687_13	33035.JPJF01000093_gene2246	221.0	0	N/A	N/A
structural_annotation	UHGV-0003687_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_14	phrog_2595	72.1	7.1e-21	head-tail connector protein	connector
UniRef90	UHGV-0003687_14	UniRef90_UPI00164BAA81	205.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0003687_14	1282664.H354_06686	103.0	1.37e-26	N/A	N/A
Pfam	UHGV-0003687_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0003687_14	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_15	phrog_556	51.7	0.000000000000015	minor head protein	head and packaging
eggNOG-mapper	UHGV-0003687_15	742740.HMPREF9474_03509	140.0	4.66997e-41	N/A	N/A
PHROG	UHGV-0003687_16	phrog_8710	128.1	3.1e-38	N/A	unknown function
eggNOG-mapper	UHGV-0003687_16	742740.HMPREF9474_03508	142.0	1.00053e-42	N/A	N/A
structural_annotation	UHGV-0003687_16	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_17	phrog_541	89.8	2.5e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0003687_17	33035.JPJF01000093_gene2250	163.0	0	N/A	N/A
PHROG	UHGV-0003687_18	phrog_422	272.4	0	major head protein	head and packaging
UniRef90	UHGV-0003687_18	UniRef90_A0A1Y4R5U9	548.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0003687_18	663278.Ethha_1589	384.0	0	N/A	N/A
structural_annotation	UHGV-0003687_18	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_19	phrog_2303	152.2	2.8026e-45	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0003687_19	1304866.K413DRAFT_0806	190.0	0	N/A	N/A
PHROG	UHGV-0003687_21	phrog_3675	104.5	5e-31	N/A	unknown function
UniRef90	UHGV-0003687_21	UniRef90_A0A3E2UCU7	195.0	0	Dihydrolipoyl dehydrogenase	N/A
eggNOG-mapper	UHGV-0003687_21	1035196.HMPREF9998_01953	125.0	3.23e-36	YjcQ protein	N/A
Pfam	UHGV-0003687_21	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0003687_21	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_23	phrog_581	238.1	0	minor head protein	head and packaging
UniRef90	UHGV-0003687_23	UniRef90_UPI000E43C4DB	678.0	0	ADP-ribosyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-0003687_23	33035.JPJF01000093_gene2255	653.0	0	N/A	N/A
Pfam	UHGV-0003687_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0003687_23	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0003687_23	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0003687_23	PF06152,PF03496,MF_04139,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_24	phrog_25639	138.5	9.90017e-42	N/A	unknown function
eggNOG-mapper	UHGV-0003687_24	742740.HMPREF9474_03502	102.0	8.02e-28	N/A	N/A
PHROG	UHGV-0003687_25	phrog_533	254.4	0	portal protein	head and packaging
UniRef90	UHGV-0003687_25	UniRef90_UPI001F14233C	694.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0003687_25	1282664.H354_06626	530.0	0	N/A	N/A
structural_annotation	UHGV-0003687_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0003687_26	K06909	100.8	1.7e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0003687_26	phrog_10250	40.0	0.0000000000026	N/A	unknown function
UniRef90	UHGV-0003687_26	UniRef90_UPI00164A3891	869.0	0	terminase	N/A
eggNOG-mapper	UHGV-0003687_26	394503.Ccel_3297	667.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0003687_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0003687_26	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_27	phrog_309	180.1	0	terminase small subunit	head and packaging
UniRef90	UHGV-0003687_27	UniRef90_UPI00164CAAF8	225.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0003687_27	1567014.A0A0A7RTX1_9VIRU	179.0	0	N/A	N/A
Pfam	UHGV-0003687_27	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
structural_annotation	UHGV-0003687_27	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_28	phrog_36	63.1	4.6e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0003687_28	UniRef90_UPI0008309BB3	86.3	8.6e-19	MarR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0003687_28	411460.RUMTOR_02080	61.6	0.000000000405	N/A	N/A
Pfam	UHGV-0003687_28	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0003687_28	PF04545,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0003687_29	428127.EUBDOL_01238	92.0	2.26e-22	N/A	N/A
eggNOG-mapper	UHGV-0003687_30	397290.C810_01492	53.1	0.000000574	N/A	N/A
UniRef90	UHGV-0003687_31	UniRef90_A0A413YTI5	116.0	3.35e-31	YopX domain-containing protein	N/A
structural_annotation	UHGV-0003687_31	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_32	phrog_21026	51.5	0.000000000000015	N/A	unknown function
UniRef90	UHGV-0003687_33	UniRef90_UPI001C009709	158.0	0	N/A	N/A
Pfam	UHGV-0003687_33	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0003687_33	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003687_34	PF12693	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_35	phrog_38560	47.1	0.00000000000035	N/A	unknown function
eggNOG-mapper	UHGV-0003687_35	610130.Closa_0723	72.0	5.87e-16	N/A	N/A
PHROG	UHGV-0003687_37	phrog_15077	111.2	1.7e-32	N/A	unknown function
UniRef90	UHGV-0003687_37	UniRef90_A5ZPN2	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-0003687_37	97139.C824_05986	360.0	0	N/A	N/A
structural_annotation	UHGV-0003687_37	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_38	phrog_8470	331.8	0	N/A	unknown function
UniRef90	UHGV-0003687_38	UniRef90_UPI001D086F83	963.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0003687_38	1235792.C808_03081	900.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0003687_38	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0003687_38	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0003687_39	1235792.C808_00065	233.0	0	N/A	N/A
PHROG	UHGV-0003687_40	phrog_7566	113.0	1.1e-33	N/A	unknown function
eggNOG-mapper	UHGV-0003687_40	411459.RUMOBE_00948	106.0	2.51e-28	N/A	N/A
PHROG	UHGV-0003687_41	phrog_355	79.4	4.2e-23	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003687_41	UniRef90_A0A6L5T7G2	99.8	1.62e-24	N/A	N/A
eggNOG-mapper	UHGV-0003687_41	521000.PROVRETT_06001	68.6	0.0000000000000851	N/A	N/A
Pfam	UHGV-0003687_41	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0003687_41	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0003687_41	PF14359,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_42	phrog_3584	154.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003687_42	UniRef90_UPI001D0EB55A	178.0	0	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0003687_42	483218.BACPEC_01173	211.0	0	N/A	N/A
structural_annotation	UHGV-0003687_42	PF21578,NF033538	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_47	phrog_14088	66.9	1.6e-19	N/A	unknown function
UniRef90	UHGV-0003687_47	UniRef90_UPI001D07CB3C	99.8	3.68e-26	carboxypeptidase	N/A
eggNOG-mapper	UHGV-0003687_47	1232453.BAIF02000057_gene1127	85.9	1.69e-21	N/A	N/A
PHROG	UHGV-0003687_48	phrog_3292	48.7	0.00000000000012	N/A	unknown function
UniRef90	UHGV-0003687_48	UniRef90_UPI00117793DB	111.0	7.97e-31	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0003687_48	1408823.AXUS01000024_gene2707	85.1	3.17e-21	KTSC domain	N/A
Pfam	UHGV-0003687_48	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-0003687_48	COG4249	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003687_48	PF13619	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0003687_49	931276.Cspa_c26580	47.0	0.00000245	N/A	N/A
UniRef90	UHGV-0003687_53	UniRef90_A0A3R6YXK3	55.8	0.00000000254	Toxin-antitoxin system HicB family antitoxin	N/A
Pfam	UHGV-0003687_53	PF05534	N/A	N/A	HicB family	HicB
UniRef90	UHGV-0003687_54	UniRef90_UPI00156EC6B6	104.0	3.74e-27	helix-turn-helix domain-containing protein	N/A
KOfam	UHGV-0003687_55	K22300	57.5	2.8e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0003687_55	phrog_8	74.7	1.5e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0003687_55	UniRef90_A0A352SIQ2	108.0	3.48e-27	Repressor LexA	N/A
eggNOG-mapper	UHGV-0003687_55	632245.CLP_2722	89.7	3.32e-21	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0003687_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0003687_55	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0003687_55	PF12844,MF_02017,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0003687_56	phrog_2158	195.2	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0003687_56	UniRef90_A0A1E3AYC4	384.0	0	Abi-like protein	N/A
eggNOG-mapper	UHGV-0003687_56	411490.ANACAC_00817	263.0	0	Abi-like protein	N/A
PADLOC	UHGV-0003687_56	AbiD	122.7	6.4e-36	AbiD	Abi
Pfam	UHGV-0003687_56	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0003687_56	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-0003687_56	PF07751,COG4823	N/A	N/A	N/A	N/A
KOfam	UHGV-0003687_57	K06400	271.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0003687_57	phrog_95	297.4	0	integrase	integration and excision
UniRef90	UHGV-0003687_57	UniRef90_A0A1M5DAF5	530.0	0	Site-specific DNA recombinase	N/A
eggNOG-mapper	UHGV-0003687_57	1235790.C805_00590	580.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0003687_57	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0003687_57	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0003687_57	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0003687_57	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0003687_57	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A