UHGV-0004463 (vOTU-160990)

Viral Genome: UHGV-0004463

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0004463
vOTU ID	vOTU-160990
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_G_7_2399__NODE_3048_length_26282_cov_10.204274_1
Associated BioSample	SAMEA4766273
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.31 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.59
Jumbo phage	No

Genome content
Genome length (bp)	19,591
GC content	46.53%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	25
CDS density	96%
Average CDS length (bps)	753.84
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0004463_1	phrog_18108	106.6	2.5e-31	N/A	unknown function
UniRef90	UHGV-0004463_1	UniRef90_UPI0004BFFB0D	106.0	6.82e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0004463_1	457405.FSDG_00799	122.0	9.06e-33	N/A	N/A
structural_annotation	UHGV-0004463_1	PF07443	N/A	N/A	N/A	N/A
KOfam	UHGV-0004463_3	K07727	55.4	0.0000000000000017	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0004463_3	UniRef90_A0A1C6DCH6	229.0	0	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-0004463_3	394503.Ccel_3173	77.0	3.62e-17	N/A	N/A
Pfam	UHGV-0004463_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
KOfam	UHGV-0004463_4	K07273	213.0	0	acm; lysozyme	N/A
PHROG	UHGV-0004463_4	phrog_291	184.6	0	endolysin	lysis
UniRef90	UHGV-0004463_4	UniRef90_A0A1C6IMI8	479.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0004463_4	246199.CUS_5914	300.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0004463_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0004463_4	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0004463_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0004463_4	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_5	phrog_1863	56.8	3.5e-17	N/A	unknown function
UniRef90	UHGV-0004463_5	UniRef90_UPI001F223E8B	68.2	0.000000000000329	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0004463_5	1226322.HMPREF1545_04027	72.0	0.00000000000000163	N/A	N/A
PHROG	UHGV-0004463_6	phrog_13256	81.3	6.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0004463_6	1160721.RBI_II00522	95.1	3.1e-25	N/A	N/A
PHROG	UHGV-0004463_7	phrog_134	55.9	5.9e-16	N/A	unknown function
UniRef90	UHGV-0004463_7	UniRef90_A0A374ERE4	98.6	3.02e-26	XkdX family protein	N/A
eggNOG-mapper	UHGV-0004463_7	478749.BRYFOR_07560	47.0	0.00000122	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0004463_7	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0004463_7	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-0004463_7	PF09693,TIGR01669	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0004463_9	1410617.JHXH01000006_gene232	85.9	0.00000000000000704	N/A	N/A
structural_annotation	UHGV-0004463_9	PF20942	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_11	phrog_9680	50.5	0.000000000000001	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0004463_11	1160721.RBI_II00526	580.0	0	N/A	N/A
structural_annotation	UHGV-0004463_11	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_12	phrog_1194	88.7	5.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0004463_12	1160721.RBI_II00527	204.0	0	N/A	N/A
structural_annotation	UHGV-0004463_12	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_13	phrog_1535	306.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0004463_13	UniRef90_R6TDK7	1257.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0004463_13	1226322.HMPREF1545_00059	402.0	0	tape measure	N/A
COG	UHGV-0004463_13	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0004463_13	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_14	phrog_11299	179.1	0	N/A	unknown function
UniRef90	UHGV-0004463_14	UniRef90_A0A2N0ULW2	206.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0004463_14	1449050.JNLE01000003_gene3882	196.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0004463_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
PHROG	UHGV-0004463_15	phrog_3099	150.7	7.00649e-45	N/A	unknown function
eggNOG-mapper	UHGV-0004463_15	1160721.RBI_II00532	208.0	0	N/A	N/A
structural_annotation	UHGV-0004463_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_16	phrog_3266	123.4	1.1e-36	tail completion	connector
eggNOG-mapper	UHGV-0004463_16	411902.CLOBOL_00130	112.0	1.08e-29	N/A	N/A
structural_annotation	UHGV-0004463_16	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_17	phrog_556	123.7	6.7e-37	minor head protein	head and packaging
UniRef90	UHGV-0004463_17	UniRef90_A0A1M7NJ72	127.0	8.5e-35	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0004463_17	1449050.JNLE01000003_gene3886	110.0	7.92e-29	N/A	N/A
Pfam	UHGV-0004463_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0004463_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_18	phrog_3366	71.3	1.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0004463_18	1449050.JNLE01000003_gene3887	84.3	1.93e-19	N/A	N/A
Pfam	UHGV-0004463_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0004463_18	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_19	phrog_541	95.3	5.1e-28	head-tail adaptor	connector
UniRef90	UHGV-0004463_19	UniRef90_A0A371AQT0	102.0	7.06e-26	N/A	N/A
eggNOG-mapper	UHGV-0004463_19	1304866.K413DRAFT_3039	92.4	1.62e-22	N/A	N/A
PHROG	UHGV-0004463_20	phrog_544	344.3	0	major head protein	head and packaging
UniRef90	UHGV-0004463_20	UniRef90_R6T873	641.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-0004463_20	936580.HMPREF1516_0718	323.0	0	N/A	N/A
NCBIFam	UHGV-0004463_20	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0004463_20	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_21	phrog_194	100.9	1.6e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0004463_21	UniRef90_R6U550	373.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0004463_21	742765.HMPREF9457_02126	153.0	1.68156e-44	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0004463_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0004463_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_23	phrog_581	335.1	0	minor head protein	head and packaging
UniRef90	UHGV-0004463_23	UniRef90_UPI00189CAB20	1194.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0004463_23	658655.HMPREF0988_02563	407.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0004463_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0004463_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0004463_23	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0004463_24	phrog_533	348.1	0	portal protein	head and packaging
UniRef90	UHGV-0004463_24	UniRef90_R6TDI6	882.0	0	Phage portal protein SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0004463_24	1304866.K413DRAFT_3035	440.0	0	N/A	N/A
structural_annotation	UHGV-0004463_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0004463_25	K06909	421.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0004463_25	phrog_18557	161.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0004463_25	UniRef90_A0A1C6IMR2	892.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0004463_25	411461.DORFOR_01162	666.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0004463_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0004463_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0004463_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0004463_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0004463_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A