Viral Genome: UHGV-0004517


Overview
UHGV ID UHGV-0004517
vOTU ID vOTU-145904
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_MoBio_hadza-A-D_L_11_1531__NODE_518_length_69915_cov_6.585183_1
Associated BioSample SAMEA4765822
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 75.26 (Medium-quality)
Trimmed provirus No
CheckV viral markers 31
CheckV host markers 1
Recoded stop codon No
Viral Content
geNomad score 0.9755
Virus hallmark genes (geNomad) 17
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 76.19
Jumbo phage No

Genome content
Genome length (bp) 40,214
GC content 43.88%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 62
CDS density 91%
Average CDS length (bps) 593.03
Total tRNA genes 0
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 75.26)
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