UHGV-0004811 (vOTU-075725)

Viral Genome: UHGV-0004811

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0004811
vOTU ID	vOTU-075725
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_A_8_1817__NODE_535_length_66803_cov_7.716048_1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	98.79 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9614
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	31.08
Jumbo phage	No

Genome content
Genome length (bp)	36,295
GC content	28.00%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	59
CDS density	95%
Average CDS length (bps)	586.48
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0004811_2	K14059	166.8	0	int; integrase	N/A
PHROG	UHGV-0004811_2	phrog_1	153.3	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-0004811_2	UniRef90_R5A639	282.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0004811_2	1294265.JCM21738_1882	105.0	1.52e-22	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0004811_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0004811_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0004811_2	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0004811_3	PF18813	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4	PBECR4
structural_annotation	UHGV-0004811_3	PF18813	N/A	N/A	N/A	N/A
UniRef90	UHGV-0004811_5	UniRef90_A0A6H3LKI1	75.1	0.0000000000000058	XRE family transcriptional regulator	N/A
Pfam	UHGV-0004811_5	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0004811_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_6	phrog_4583	40.5	0.000000000038	transcriptional repressor	transcription regulation
UniRef90	UHGV-0004811_6	UniRef90_A0A7X2NKL4	63.2	0.0000000000104	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0004811_6	1347392.CCEZ01000005_gene1206	51.6	0.0000000605	N/A	N/A
Pfam	UHGV-0004811_6	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0004811_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_9	phrog_989	46.4	0.00000000000039	N/A	unknown function
eggNOG-mapper	UHGV-0004811_9	469596.HMPREF9488_01471	51.6	0.0000000619	N/A	N/A
PHROG	UHGV-0004811_11	phrog_8489	212.9	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0004811_11	UniRef90_UPI00123C5B2A	169.0	0	DNA replication protein	N/A
eggNOG-mapper	UHGV-0004811_11	762550.LEGAS_1609	177.0	0	DnaD domain protein	N/A
COG	UHGV-0004811_11	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0004811_11	PF06926	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_13	phrog_674	101.4	8.2e-30	N/A	unknown function
UniRef90	UHGV-0004811_13	UniRef90_UPI000553F60F	74.7	0.00000000000888	N/A	N/A
eggNOG-mapper	UHGV-0004811_13	1408437.JNJN01000039_gene373	74.7	0.00000000000149	N/A	N/A
Pfam	UHGV-0004811_13	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0004811_13	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-0004811_14	K07455	208.9	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0004811_14	phrog_148	218.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0004811_14	UniRef90_R6E1Z6	338.0	0	Recombinase phage RecT family	N/A
eggNOG-mapper	UHGV-0004811_14	1095750.HMPREF9970_1675	330.0	0	RecT family	N/A
Pfam	UHGV-0004811_14	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0004811_14	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0004811_14	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0004811_14	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0004811_15	K06167	46.7	0.00000000000024	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0004811_15	phrog_392	129.9	2.3e-38	metal-dependent hydrolase	other
UniRef90	UHGV-0004811_15	UniRef90_A0A353JB44	259.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0004811_15	665956.HMPREF1032_03101	170.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0004811_15	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0004811_15	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0004811_15	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
UniRef90	UHGV-0004811_18	UniRef90_UPI000C7BF263	80.5	4.58e-16	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0004811_18	1507.HMPREF0262_00432	90.1	1.78e-20	N/A	N/A
PHROG	UHGV-0004811_24	phrog_4392	41.1	0.000000000022	N/A	unknown function
PHROG	UHGV-0004811_27	phrog_625	76.3	2.4e-22	N/A	unknown function
UniRef90	UHGV-0004811_27	UniRef90_A0A413YU40	117.0	7.21e-32	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0004811_27	397290.C810_01502	111.0	1.67e-30	N/A	N/A
structural_annotation	UHGV-0004811_27	PF12961,NF002008,COG2028	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0004811_29	PF20384,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_30	phrog_7445	43.9	0.0000000000018	N/A	unknown function
UniRef90	UHGV-0004811_30	UniRef90_A0A318KCJ7	61.6	0.000000000876	PcfK-like protein	N/A
eggNOG-mapper	UHGV-0004811_30	1232449.BAHV02000018_gene1541	60.1	0.000000000915	PcfK-like protein	N/A
Pfam	UHGV-0004811_30	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0004811_30	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_31	phrog_8470	128.4	1.7e-40	N/A	unknown function
UniRef90	UHGV-0004811_31	UniRef90_UPI001D12E223	73.6	0.000000000161	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0004811_31	1582152.A0A0A8WIR3_9CAUD	71.2	0.000000000149	PcfJ-like protein	N/A
Pfam	UHGV-0004811_31	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0004811_31	PF14284	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0004811_33	PF15456	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_35	phrog_309	165.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-0004811_35	UniRef90_UPI000AC737F1	167.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0004811_35	649747.HMPREF0083_05320	152.0	5.60519e-45	transposase activity	N/A
Pfam	UHGV-0004811_35	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0004811_35	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0004811_35	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0004811_36	K06909	218.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0004811_36	phrog_10250	117.4	9.4e-35	N/A	unknown function
UniRef90	UHGV-0004811_36	UniRef90_A0A3B8SL24	689.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0004811_36	428127.EUBDOL_01229	549.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0004811_36	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0004811_36	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0004811_36	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0004811_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0004811_36	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_37	phrog_533	282.5	0	portal protein	head and packaging
UniRef90	UHGV-0004811_37	UniRef90_R6Y8H1	492.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0004811_37	545697.HMPREF0216_02845	307.0	0	N/A	N/A
structural_annotation	UHGV-0004811_37	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_38	phrog_581	218.9	0	minor head protein	head and packaging
UniRef90	UHGV-0004811_38	UniRef90_UPI001F068465	192.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0004811_38	552396.HMPREF0863_00280	120.0	3.52e-26	Phage minor capsid protein 2	N/A
Pfam	UHGV-0004811_38	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0004811_38	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0004811_38	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_40	phrog_194	46.8	0.00000000000055	head scaffolding protein	head and packaging
UniRef90	UHGV-0004811_40	UniRef90_UPI00117868A2	110.0	2.65e-27	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0004811_40	545697.HMPREF0216_02848	91.3	1.9e-20	Phage minor structural protein GP20	N/A
Pfam	UHGV-0004811_40	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0004811_40	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_41	phrog_422	219.9	0	major head protein	head and packaging
UniRef90	UHGV-0004811_41	UniRef90_W0U896	281.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0004811_41	1160721.RBI_II00538	281.0	0	N/A	N/A
structural_annotation	UHGV-0004811_41	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_43	phrog_541	68.1	1.3e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0004811_43	536233.CLO_0887	56.2	0.0000000243	N/A	N/A
PHROG	UHGV-0004811_44	phrog_3366	50.2	0.000000000000045	N/A	unknown function
structural_annotation	UHGV-0004811_44	PF20536	N/A	N/A	N/A	N/A
UniRef90	UHGV-0004811_45	UniRef90_UPI00067E9657	65.1	0.000000000144	minor capsid protein	N/A
eggNOG-mapper	UHGV-0004811_45	1235790.C805_00048	57.0	0.0000000471	N/A	N/A
structural_annotation	UHGV-0004811_45	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_46	phrog_3266	65.7	6e-19	tail completion	connector
eggNOG-mapper	UHGV-0004811_46	903814.ELI_3203	59.7	0.0000000034	N/A	N/A
structural_annotation	UHGV-0004811_46	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_47	phrog_3099	76.8	3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0004811_47	1449050.JNLE01000003_gene3884	77.4	0.00000000000000166	N/A	N/A
structural_annotation	UHGV-0004811_47	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0004811_48	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_49	phrog_706	142.5	2.40042e-42	N/A	unknown function
UniRef90	UHGV-0004811_49	UniRef90_UPI000B35C11D	142.0	1.82e-39	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0004811_49	476272.RUMHYD_01784	103.0	3.74e-25	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0004811_49	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0004811_49	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0004811_50	phrog_1535	109.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0004811_50	1120746.CCNL01000014_gene2105	78.6	0.00000000000356	tape measure	N/A
COG	UHGV-0004811_50	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0004811_51	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0004811_52	NF033848,COG4926	N/A	N/A	N/A	N/A
Pfam	UHGV-0004811_53	PF00404	N/A	N/A	Dockerin type I domain	Dockerin_1
PHROG	UHGV-0004811_54	phrog_17134	44.1	0.0000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0004811_55	476272.RUMHYD_00002	59.7	0.00000373	N/A	N/A
PHROG	UHGV-0004811_57	phrog_937	42.4	0.000000000012	hemolysin	other
PHROG	UHGV-0004811_58	phrog_774	64.1	2.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0004811_58	397290.C810_05225	73.9	4.25e-16	N/A	N/A
PHROG	UHGV-0004811_59	phrog_918	120.4	5.3e-36	N/A	unknown function
UniRef90	UHGV-0004811_59	UniRef90_UPI001D020797	131.0	3.09e-38	N/A	N/A
eggNOG-mapper	UHGV-0004811_59	1140001.I571_01827	129.0	3.09e-38	N/A	N/A
Pfam	UHGV-0004811_59	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0004811_59	PF19791	N/A	N/A	N/A	N/A