Viral Genome: UHGV-0005230


Genome Information

Overview
UHGV ID UHGV-0005230
vOTU ID vOTU-026650
Representative Genome? No
Source Hadza
Original genome ID Hadza_MoBio_hadza-E-H_F_2_2205__NODE_2_length_477070_cov_12.544251_1
Associated BioSample SAMEA4766191
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 77.6 (Medium-quality)
Trimmed provirus No
CheckV viral markers 16
CheckV host markers 0
Recoded stop codon No
Viral Content
geNomad score 0.9718
Virus hallmark genes (geNomad) 9
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 39.93
Jumbo phage No

Genome content
Genome length (bp) 31,422
GC content 58.30%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 50
CDS density 94%
Average CDS length (bps) 588.54
Total tRNA genes 0
Suppressor tRNA genes 0
x
This website uses cookies to improve user experience. By using this service you consent to all cookies in accordance with our privacy policy. OK