UHGV-0006943 (vOTU-095195)

Viral Genome: UHGV-0006943

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0006943
vOTU ID	vOTU-095195
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_N_21_1514__NODE_365_length_61653_cov_6.936501_1
Associated BioSample	SAMEA4765806
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.19 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.978
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	45.78
Jumbo phage	No

Genome content
Genome length (bp)	32,870
GC content	40.78%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	94%
Average CDS length (bps)	617.16
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 84.19)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0006943_1	UniRef90_UPI0006B474CD	83.2	2.16e-19	N/A	N/A
eggNOG-mapper	UHGV-0006943_1	1229751.R9QLK3_9CAUD	76.3	1.65e-17	N/A	N/A
Pfam	UHGV-0006943_1	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0006943_1	PF05339,MF_00535,NF002773,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_3	phrog_750	78.7	5.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0006943_3	742723.HMPREF9477_00931	92.0	7.4e-23	N/A	N/A
structural_annotation	UHGV-0006943_3	PF13835,NF040858	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_12	phrog_408	62.7	5.6e-18	N/A	unknown function
PHROG	UHGV-0006943_13	phrog_69	338.6	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006943_13	UniRef90_A0A412L7W2	674.0	0	N/A	N/A
eggNOG-mapper	UHGV-0006943_13	1151292.QEW_2472	353.0	0	N/A	N/A
Pfam	UHGV-0006943_13	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0006943_13	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0006943_13	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_14	phrog_112	214.9	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006943_14	UniRef90_A0A412UNI7	291.0	0	N/A	N/A
eggNOG-mapper	UHGV-0006943_14	1540257.JQMW01000004_gene440	235.0	0	N/A	N/A
Pfam	UHGV-0006943_14	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0006943_14	PF10991,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-0006943_15	K02334	904.6	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0006943_15	phrog_17	414.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006943_15	UniRef90_A0A412UNJ8	1201.0	0	POLAc domain-containing protein	N/A
eggNOG-mapper	UHGV-0006943_15	1274524.BSONL12_06038	771.0	0	DNA polymerase A domain	N/A
Pfam	UHGV-0006943_15	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0006943_15	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0006943_15	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_16	phrog_256	1071.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006943_16	UniRef90_UPI001D06E26F	833.0	0	virulence-associated E family protein	N/A
eggNOG-mapper	UHGV-0006943_16	536232.CLM_2670	814.0	0	virulence-associated E family protein	N/A
Pfam	UHGV-0006943_16	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0006943_16	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0006943_16	PF05272,MF_04000,NF005477,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_17	phrog_93	75.1	9.8e-22	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006943_17	UniRef90_A0A412UNG8	145.0	1.24716e-43	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0006943_17	879305.HMPREF9290_0155	95.5	1.49e-24	VRR_NUC	N/A
Pfam	UHGV-0006943_17	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0006943_17	PF08774,MF_00130,NF002584	N/A	N/A	N/A	N/A
KOfam	UHGV-0006943_18	K14440	126.2	6.3e-38	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0006943_18	phrog_62	415.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006943_18	UniRef90_A0A412L7W0	852.0	0	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-0006943_18	97138.C820_00220	616.0	0	snf2 family	N/A
PADLOC	UHGV-0006943_18	ZorD1_00007	83.6	9.3e-25	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0006943_18	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0006943_18	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0006943_18	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0006943_18	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006943_19	PF09889	N/A	N/A	N/A	N/A
Pfam	UHGV-0006943_21	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0006943_21	PF14354,TIGR03655	N/A	N/A	N/A	N/A
KOfam	UHGV-0006943_23	K18830	56.5	7.4e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0006943_23	phrog_8	65.8	9.7e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0006943_23	UniRef90_A0A374N9T4	107.0	2.09e-29	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0006943_23	1444306.JFZC01000047_gene389	76.3	7.31e-17	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-0006943_23	retron_type_VI_hth_cluster2_1	42.8	0.000000000015	N/A	Retron
Pfam	UHGV-0006943_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0006943_23	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0006943_23	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_25	phrog_2245	93.1	2.8e-27	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0006943_25	UniRef90_A0A846K3D1	58.5	0.0000000044	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0006943_25	1519439.JPJG01000059_gene1914	62.0	0.0000000000614	N/A	N/A
structural_annotation	UHGV-0006943_26	PF14282,COG5570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0006943_27	1540257.JQMW01000004_gene433	50.4	0.00000365	N/A	N/A
structural_annotation	UHGV-0006943_27	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_28	phrog_3634	121.7	7.3e-36	N/A	unknown function
eggNOG-mapper	UHGV-0006943_28	411459.RUMOBE_00941	194.0	0	COG NOG22561 non supervised orthologous group	N/A
COG	UHGV-0006943_28	COG0457	N/A	N/A	Tetratricopeptide (TPR) repeat	N/A
structural_annotation	UHGV-0006943_28	PF10137,MF_03036,TIGR03646,COG4271	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_29	phrog_309	149.3	8.40779e-45	terminase small subunit	head and packaging
UniRef90	UHGV-0006943_29	UniRef90_UPI001A9BCC34	220.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0006943_29	693746.OBV_18020	142.0	2.12997e-41	transposase activity	N/A
Pfam	UHGV-0006943_29	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-0006943_29	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0006943_29	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0006943_30	K06909	77.0	2.5e-22	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0006943_30	phrog_2	85.5	9.4e-25	terminase large subunit	head and packaging
UniRef90	UHGV-0006943_30	UniRef90_UPI00189AB5B3	861.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0006943_30	1304866.K413DRAFT_3034	605.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0006943_30	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0006943_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0006943_30	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_31	phrog_533	320.7	0	portal protein	head and packaging
UniRef90	UHGV-0006943_31	UniRef90_UPI00189C53D6	806.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0006943_31	1304866.K413DRAFT_3035	472.0	0	N/A	N/A
structural_annotation	UHGV-0006943_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_32	phrog_581	303.4	0	minor head protein	head and packaging
UniRef90	UHGV-0006943_32	UniRef90_UPI001897AC3D	1164.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0006943_32	658655.HMPREF0988_02563	347.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0006943_32	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0006943_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006943_32	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_36	phrog_194	99.0	5.8e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0006943_36	UniRef90_UPI0018995066	342.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0006943_36	742765.HMPREF9457_02126	163.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0006943_36	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0006943_36	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_37	phrog_422	237.1	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0006943_37	693746.OBV_18090	386.0	0	N/A	N/A
structural_annotation	UHGV-0006943_37	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_38	phrog_541	78.1	1e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-0006943_38	1449050.JNLE01000003_gene3888	79.7	1.32e-17	N/A	N/A
PHROG	UHGV-0006943_39	phrog_3366	64.6	1.3e-18	N/A	unknown function
Pfam	UHGV-0006943_39	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0006943_39	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_40	phrog_556	118.7	1.6e-35	minor head protein	head and packaging
UniRef90	UHGV-0006943_40	UniRef90_UPI00189BC4F9	336.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0006943_40	1449050.JNLE01000003_gene3886	147.0	4.33001e-43	N/A	N/A
Pfam	UHGV-0006943_40	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0006943_40	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_41	phrog_3266	94.9	6.3e-28	tail completion	connector
eggNOG-mapper	UHGV-0006943_41	1449050.JNLE01000003_gene3885	139.0	2.15e-40	N/A	N/A
structural_annotation	UHGV-0006943_41	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_42	phrog_3099	144.1	6.7963e-43	N/A	unknown function
eggNOG-mapper	UHGV-0006943_42	1160721.RBI_II00532	208.0	0	N/A	N/A
structural_annotation	UHGV-0006943_42	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_43	phrog_11299	115.2	4.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-0006943_43	1449050.JNLE01000003_gene3883	67.8	0.00000000000213	N/A	N/A
structural_annotation	UHGV-0006943_43	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_44	phrog_706	145.3	3.40516e-43	N/A	unknown function
UniRef90	UHGV-0006943_44	UniRef90_UPI001B3C82AE	259.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0006943_44	1160721.RBI_II00530	202.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0006943_44	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0006943_44	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_45	phrog_1535	303.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0006943_45	33035.JPJF01000093_gene2243	326.0	0	phage tail tape measure protein	N/A
COG	UHGV-0006943_45	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0006943_45	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_46	phrog_1194	61.2	1.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-0006943_46	397290.C810_05238	97.1	6.37e-24	N/A	N/A
Pfam	UHGV-0006943_46	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0006943_46	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0006943_47	phrog_18190	74.0	1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0006943_47	483218.BACPEC_01143	72.4	0.0000000000963	N/A	N/A
structural_annotation	UHGV-0006943_47	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006943_48	PF01664	N/A	N/A	N/A	N/A
KOfam	UHGV-0006943_50	K01447	117.1	2.2e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0006943_50	phrog_833	173.0	0	endolysin	lysis
UniRef90	UHGV-0006943_50	UniRef90_R6MSP5	398.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0006943_50	1519439.JPJG01000060_gene1899	117.0	2.39e-30	Ami_2	N/A
Pfam	UHGV-0006943_50	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0006943_50	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0006943_50	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A