Viral Genome: UHGV-0007088


Overview
UHGV ID UHGV-0007088
vOTU ID vOTU-158553
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_MoBio_hadza-I-L_D_12_1182__NODE_290_length_159740_cov_24.257405_1
Associated BioSample SAMEA4765641
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 85.72 (Medium-quality)
Trimmed provirus No
CheckV viral markers 18
CheckV host markers 1
Recoded stop codon No
Viral Content
geNomad score 0.9687
Virus hallmark genes (geNomad) 13
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 20.91
Jumbo phage No

Genome content
Genome length (bp) 39,670
GC content 45.22%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 50
CDS density 93%
Average CDS length (bps) 733.92
Total tRNA genes 0
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 85.72)
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