UHGV-0007597 (vOTU-089795)

Viral Genome: UHGV-0007597

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0007597
vOTU ID	vOTU-089795
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_K_24_1920__NODE_3230_length_39767_cov_5.587705_1
Associated BioSample	SAMEA4766100
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	85.13 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9783
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.24
Jumbo phage	No

Genome content
Genome length (bp)	34,016
GC content	43.79%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	93%
Average CDS length (bps)	630.48
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 85.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0007597_1	phrog_29047	104.2	1.1e-30	N/A	unknown function
UniRef90	UHGV-0007597_1	UniRef90_F9VIT4	103.0	1.71e-26	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0007597_1	97138.C820_00745	122.0	1.29e-35	N/A	N/A
Pfam	UHGV-0007597_1	PF10387	N/A	N/A	N/A	DUF2442
COG	UHGV-0007597_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0007597_1	PF10387	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_2	phrog_14333	121.6	2.8e-36	N/A	unknown function
UniRef90	UHGV-0007597_2	UniRef90_A0A7G5NVQ6	129.0	1.46e-37	N/A	N/A
eggNOG-mapper	UHGV-0007597_2	525282.HMPREF0391_11080	161.0	0	N/A	N/A
Pfam	UHGV-0007597_2	PF13711	N/A	N/A	N/A	DUF4160
structural_annotation	UHGV-0007597_2	PF13711	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_3	phrog_4611	54.0	0.0000000000000011	minor head protein	head and packaging
eggNOG-mapper	UHGV-0007597_3	1179226.AJXO01000005_gene1853	73.9	0.0000000000467	Phage minor capsid protein 2	N/A
Pfam	UHGV-0007597_3	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
Pfam	UHGV-0007597_3	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
PHROG	UHGV-0007597_4	phrog_87	91.8	5.4e-27	metallo-protease	other
UniRef90	UHGV-0007597_4	UniRef90_A0A350VV99	199.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0007597_4	556261.HMPREF0240_01267	153.0	1.4013e-45	Zn peptidase	N/A
Pfam	UHGV-0007597_4	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0007597_4	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0007597_4	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-0007597_5	K22300	46.9	0.00000000000056	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0007597_5	phrog_2967	58.3	1.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0007597_5	UniRef90_A0A3A9CUU7	135.0	7.68e-38	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0007597_5	1120998.AUFC01000030_gene2204	118.0	7.46e-32	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0007597_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0007597_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0007597_5	PF13560,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_6	phrog_3	41.0	0.000000000077	transcriptional repressor	transcription regulation
UniRef90	UHGV-0007597_6	UniRef90_A0A3A9CUH5	94.0	7.46e-24	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0007597_6	536233.CLO_0858	80.9	1.72e-19	Helix-turn-helix	N/A
Pfam	UHGV-0007597_6	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0007597_6	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0007597_13	877424.ATWC01000016_gene168	55.1	0.0000000181	N/A	N/A
Pfam	UHGV-0007597_13	PF20323	N/A	N/A	N/A	DUF6618
structural_annotation	UHGV-0007597_13	PF20323	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_14	phrog_3584	270.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007597_14	UniRef90_A0A4P8IFK4	237.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007597_14	411459.RUMOBE_01756	350.0	0	COG NOG14934 non supervised orthologous group	N/A
structural_annotation	UHGV-0007597_14	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_15	phrog_824	150.7	4.2039e-45	N/A	unknown function
UniRef90	UHGV-0007597_15	UniRef90_A0A2N0K9N3	201.0	0	Nuclease	N/A
eggNOG-mapper	UHGV-0007597_15	742741.HMPREF9475_00407	206.0	0	VRR_NUC	N/A
Pfam	UHGV-0007597_15	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-0007597_17	K03496	172.7	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0007597_17	phrog_164	151.1	7.00649e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007597_17	UniRef90_A0A3R6XV13	373.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0007597_17	411459.RUMOBE_01750	355.0	0	CobQ CobB MinD ParA nucleotide binding domain protein	N/A
Pfam	UHGV-0007597_17	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0007597_17	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0007597_17	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0007597_18	K03497	64.2	1.3e-18	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0007597_18	phrog_15982	570.2	0	N/A	unknown function
UniRef90	UHGV-0007597_18	UniRef90_A0A7X5CGW3	450.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007597_18	742741.HMPREF9475_00414	454.0	0	N/A	N/A
Pfam	UHGV-0007597_18	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0007597_18	PF12961	N/A	N/A	N/A	DUF3850
COG	UHGV-0007597_18	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0007597_18	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
KOfam	UHGV-0007597_19	K03469	54.6	0.0000000000000023	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0007597_19	phrog_531	55.0	0.0000000000000015	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007597_19	UniRef90_A0A350VVB3	93.6	1.53e-21	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0007597_19	1537715.JQFJ01000002_gene300	58.5	0.00000000921	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0007597_19	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0007597_19	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0007597_19	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-0007597_20	K03111	58.0	2.3e-16	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0007597_20	phrog_26861	116.0	1.5e-34	N/A	unknown function
UniRef90	UHGV-0007597_20	UniRef90_R7MAT7	204.0	0	Single-strand binding protein/Primosomal replication protein n	N/A
eggNOG-mapper	UHGV-0007597_20	33035.JPJF01000003_gene1839	197.0	0	N/A	N/A
Pfam	UHGV-0007597_20	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0007597_20	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0007597_20	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0007597_20	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_21	phrog_17690	43.9	0.0000000000034	N/A	unknown function
structural_annotation	UHGV-0007597_22	PF18024,TIGR04381	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_24	phrog_15198	46.4	0.00000000000065	N/A	unknown function
UniRef90	UHGV-0007597_24	UniRef90_A0A1Q6KA59	116.0	1e-31	N/A	N/A
eggNOG-mapper	UHGV-0007597_24	478749.BRYFOR_07594	92.0	3.62e-21	N/A	N/A
Pfam	UHGV-0007597_24	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0007597_25	phrog_1384	99.6	2.8e-29	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0007597_25	411461.DORFOR_01154	262.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0007597_25	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0007597_27	1235793.C809_02213	223.0	0	N/A	N/A
PHROG	UHGV-0007597_28	phrog_10714	50.8	0.000000000000025	N/A	unknown function
PHROG	UHGV-0007597_29	phrog_20593	80.3	7.7e-24	N/A	unknown function
KOfam	UHGV-0007597_30	K03111	117.8	1.5e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0007597_30	phrog_44	119.0	4.6e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007597_30	UniRef90_A0A3C0J9F4	204.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0007597_30	511680.BUTYVIB_00906	200.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0007597_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0007597_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0007597_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0007597_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0007597_30	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_32	phrog_309	152.3	1.4013e-45	terminase small subunit	head and packaging
UniRef90	UHGV-0007597_32	UniRef90_A0A417T189	149.0	2.4803e-42	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0007597_32	411470.RUMGNA_02210	145.0	1.32002e-41	transposase activity	N/A
COG	UHGV-0007597_32	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0007597_32	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0007597_33	K06909	131.1	1.1e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0007597_33	phrog_2	161.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0007597_33	UniRef90_A0A350VVC2	838.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0007597_33	1120998.AUFC01000030_gene2231	384.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0007597_33	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0007597_33	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0007597_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0007597_33	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_34	phrog_533	209.2	0	portal protein	head and packaging
UniRef90	UHGV-0007597_34	UniRef90_UPI00164B7587	462.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0007597_34	645991.Sgly_0336	144.0	2.69e-35	N/A	N/A
structural_annotation	UHGV-0007597_34	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_35	phrog_581	217.5	0	minor head protein	head and packaging
UniRef90	UHGV-0007597_35	UniRef90_UPI00156DAD02	249.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0007597_35	1226322.HMPREF1545_00046	134.0	8.04e-31	Phage minor capsid protein 2	N/A
Pfam	UHGV-0007597_35	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0007597_35	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0007597_35	PF06152,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_37	phrog_194	81.5	1.3e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0007597_37	UniRef90_A0A173RNU4	178.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0007597_37	742765.HMPREF9457_02126	100.0	4.55e-24	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0007597_37	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0007597_37	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_38	phrog_212	266.2	0	major head protein	head and packaging
UniRef90	UHGV-0007597_38	UniRef90_A0A350VVC8	629.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0007597_38	318464.IO99_00580	369.0	0	N/A	N/A
structural_annotation	UHGV-0007597_38	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_39	phrog_541	64.8	1.3e-18	head-tail adaptor	connector
PHROG	UHGV-0007597_40	phrog_3366	78.4	9.6e-23	N/A	unknown function
Pfam	UHGV-0007597_40	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0007597_40	PF20536,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_41	phrog_556	67.0	2.4e-19	minor head protein	head and packaging
UniRef90	UHGV-0007597_41	UniRef90_UPI00067E9657	105.0	4.12e-26	minor capsid protein	N/A
eggNOG-mapper	UHGV-0007597_41	1235790.C805_00048	67.4	0.00000000000571	N/A	N/A
Pfam	UHGV-0007597_41	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0007597_41	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_42	phrog_3266	85.8	4e-25	tail completion	connector
UniRef90	UHGV-0007597_42	UniRef90_A0A416DT59	56.6	0.00000018	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0007597_42	999411.HMPREF1092_03317	62.4	0.000000000184	N/A	N/A
structural_annotation	UHGV-0007597_42	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_43	phrog_3099	142.1	2.90069e-42	N/A	unknown function
eggNOG-mapper	UHGV-0007597_43	1235790.C805_00082	137.0	5.18e-39	N/A	N/A
structural_annotation	UHGV-0007597_43	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_44	phrog_11299	44.4	0.0000000000027	N/A	unknown function
eggNOG-mapper	UHGV-0007597_44	1235790.C805_00083	70.9	0.000000000000114	N/A	N/A
structural_annotation	UHGV-0007597_44	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_45	phrog_706	122.4	3.4e-36	N/A	unknown function
UniRef90	UHGV-0007597_45	UniRef90_R5H1B0	139.0	4.57e-38	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0007597_45	1235790.C805_00084	120.0	9.07e-32	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0007597_45	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0007597_45	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_46	phrog_1535	125.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0007597_46	33035.JPJF01000043_gene1003	93.6	1.5e-16	phage tail tape measure protein	N/A
COG	UHGV-0007597_46	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_47	phrog_1194	64.9	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0007597_47	1235790.C805_00088	199.0	0	N/A	N/A
Pfam	UHGV-0007597_47	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0007597_47	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0007597_48	phrog_18190	255.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0007597_48	1235790.C805_00089	349.0	0	N/A	N/A
structural_annotation	UHGV-0007597_48	PF05113,PF13884,NF033848,COG3500	N/A	N/A	N/A	N/A