UHGV-0007902 (vOTU-083715)

Viral Genome: UHGV-0007902

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0007902
vOTU ID	vOTU-083715
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_A_2_1814__NODE_904_length_54148_cov_5.696917_1
Associated BioSample	SAMEA4766051
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.75 (High-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9786
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.82
Jumbo phage	No

Genome content
Genome length (bp)	36,747
GC content	42.47%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	56
CDS density	91%
Average CDS length (bps)	598.71
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.75)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0007902_1	K14059	154.3	1.4013e-45	int; integrase	N/A
PHROG	UHGV-0007902_1	phrog_1	151.7	5.60519e-45	integrase	integration and excision
UniRef90	UHGV-0007902_1	UniRef90_A0A417H3Q5	547.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0007902_1	1304866.K413DRAFT_1180	395.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0007902_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0007902_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0007902_1	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_2	phrog_8545	65.3	8.8e-19	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0007902_2	UniRef90_UPI001C0EAFDF	273.0	0	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-0007902_2	1304866.K413DRAFT_0836	185.0	0	tRNA_anti-like	N/A
Pfam	UHGV-0007902_2	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-0007902_2	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_3	phrog_87	78.6	6.2e-23	metallo-protease	other
UniRef90	UHGV-0007902_3	UniRef90_UPI001D07A9BA	241.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0007902_3	457412.RSAG_00798	251.0	0	Zn peptidase	N/A
COG	UHGV-0007902_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0007902_3	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_4	phrog_37898	122.2	1.7e-36	N/A	unknown function
UniRef90	UHGV-0007902_4	UniRef90_A0A416QWX7	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007902_4	877414.ATWA01000082_gene1189	100.0	1.56e-26	N/A	N/A
Pfam	UHGV-0007902_4	PF10387	N/A	N/A	N/A	DUF2442
structural_annotation	UHGV-0007902_4	PF10387	N/A	N/A	N/A	N/A
UniRef90	UHGV-0007902_5	UniRef90_A0A8E3SPD1	361.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007902_5	1038869.AXAN01000065_gene6115	84.0	2.2e-16	N/A	N/A
Pfam	UHGV-0007902_5	PF12686	N/A	N/A	N/A	DUF3800
structural_annotation	UHGV-0007902_5	TIGR00729,COG1039	N/A	N/A	N/A	N/A
KOfam	UHGV-0007902_6	K22299	60.7	3.5e-17	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0007902_6	phrog_8	86.3	4.8e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-0007902_6	UniRef90_UPI001D0969DE	265.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0007902_6	1121115.AXVN01000006_gene2173	107.0	7.63e-28	sequence-specific DNA binding	N/A
PADLOC	UHGV-0007902_6	retron_type_VI_hth_cluster2_1	49.5	0.000000000000055	N/A	Retron
Pfam	UHGV-0007902_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0007902_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0007902_6	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0007902_7	UniRef90_UPI001D072BB4	127.0	3.67e-37	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0007902_7	1111454.HMPREF1250_1029	75.5	2.02e-17	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0007902_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0007902_7	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0007902_10	PF17452	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_14	phrog_3584	151.6	5.60519e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007902_14	UniRef90_UPI001D0EB55A	341.0	0	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0007902_14	483218.BACPEC_01173	196.0	0	N/A	N/A
structural_annotation	UHGV-0007902_14	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0007902_15	K03469	62.2	1.1e-17	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0007902_15	phrog_531	54.3	0.0000000000000024	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007902_15	UniRef90_A0A6L8XU60	201.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0007902_15	411459.RUMOBE_00952	109.0	5.97e-29	RNase H	N/A
Pfam	UHGV-0007902_15	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0007902_15	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0007902_15	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0007902_16	1280698.AUJS01000007_gene1016	130.0	3.69e-36	N/A	N/A
PHROG	UHGV-0007902_17	phrog_4433	42.9	0.00000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0007902_17	411902.CLOBOL_05698	132.0	1.95e-36	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0007902_17	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0007902_17	PF12120,NF000318	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_18	phrog_8470	231.4	0	N/A	unknown function
UniRef90	UHGV-0007902_18	UniRef90_UPI001158FAD9	422.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0007902_18	411902.CLOBOL_05697	468.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0007902_18	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0007902_18	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_19	phrog_15077	82.4	9.2e-24	N/A	unknown function
UniRef90	UHGV-0007902_19	UniRef90_A0A3A6HZA9	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007902_19	1280698.AUJS01000007_gene1019	169.0	9.80909e-45	N/A	N/A
UniRef90	UHGV-0007902_20	UniRef90_A0A3R6QEJ7	150.0	3.50325e-44	N/A	N/A
eggNOG-mapper	UHGV-0007902_20	1256908.HMPREF0373_00667	99.0	5.85e-25	N/A	N/A
eggNOG-mapper	UHGV-0007902_22	1235798.C817_05493	92.8	1.04e-23	N/A	N/A
PHROG	UHGV-0007902_23	phrog_7566	99.8	1.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0007902_23	693746.OBV_24070	68.2	0.000000000000332	N/A	N/A
PHROG	UHGV-0007902_24	phrog_625	73.0	2.8e-21	N/A	unknown function
UniRef90	UHGV-0007902_24	UniRef90_A0A3E4M7G5	141.0	1.63994e-41	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0007902_24	397290.C810_01502	142.0	1.54003e-42	N/A	N/A
structural_annotation	UHGV-0007902_24	PF12961,NF002008,COG2028	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_27	phrog_6568	47.8	0.00000000000017	N/A	unknown function
PHROG	UHGV-0007902_28	phrog_36	65.5	1e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0007902_28	UniRef90_R6ZAS5	144.0	3.09995e-41	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-0007902_28	476272.RUMHYD_02841	186.0	0	N/A	N/A
structural_annotation	UHGV-0007902_28	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0007902_29	K07474	136.6	2.69999e-40	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0007902_29	phrog_51	134.2	8.1e-40	terminase small subunit	head and packaging
UniRef90	UHGV-0007902_29	UniRef90_A0A417CPY2	307.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0007902_29	742740.HMPREF9474_03499	213.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0007902_29	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0007902_29	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0007902_29	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0007902_30	K06909	96.9	2.7e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0007902_30	phrog_2	76.8	4.3e-22	terminase large subunit	head and packaging
UniRef90	UHGV-0007902_30	UniRef90_A0A417CQ07	875.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0007902_30	742740.HMPREF9474_03500	765.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0007902_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0007902_30	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_31	phrog_533	291.5	0	portal protein	head and packaging
UniRef90	UHGV-0007902_31	UniRef90_UPI000E434FCA	1024.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0007902_31	742740.HMPREF9474_03501	706.0	0	N/A	N/A
structural_annotation	UHGV-0007902_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_32	phrog_581	236.7	0	minor head protein	head and packaging
UniRef90	UHGV-0007902_32	UniRef90_A0A416Q253	616.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0007902_32	33035.JPJF01000093_gene2255	495.0	0	N/A	N/A
Pfam	UHGV-0007902_32	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0007902_32	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0007902_32	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_35	phrog_3675	94.5	6.4e-28	N/A	unknown function
UniRef90	UHGV-0007902_35	UniRef90_A0A416Q246	195.0	0	Dihydrolipoyl dehydrogenase	N/A
eggNOG-mapper	UHGV-0007902_35	585501.HMPREF6123_0838	135.0	3.8e-40	YjcQ protein	N/A
Pfam	UHGV-0007902_35	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0007902_35	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_36	phrog_355	57.3	2.8e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007902_36	UniRef90_UPI000E473058	192.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007902_36	397290.C810_05229	178.0	0	N/A	N/A
structural_annotation	UHGV-0007902_36	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_37	phrog_918	98.5	3.3e-29	N/A	unknown function
UniRef90	UHGV-0007902_37	UniRef90_UPI00156D5D02	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007902_37	537007.BLAHAN_05515	153.0	0	N/A	N/A
Pfam	UHGV-0007902_37	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0007902_37	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_38	phrog_478	118.8	2.5e-35	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0007902_38	UniRef90_R6R5K5	142.0	2.03006e-41	Protein 64 protein	N/A
eggNOG-mapper	UHGV-0007902_38	521003.COLINT_02327	139.0	7.95994e-41	N/A	N/A
PHROG	UHGV-0007902_40	phrog_2303	147.0	1.30321e-43	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0007902_40	33035.JPJF01000093_gene2253	179.0	0	N/A	N/A
PHROG	UHGV-0007902_41	phrog_422	348.5	0	major head protein	head and packaging
UniRef90	UHGV-0007902_41	UniRef90_UPI000E4423C7	546.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0007902_41	33035.JPJF01000093_gene2252	470.0	0	N/A	N/A
structural_annotation	UHGV-0007902_41	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_42	phrog_1378	72.2	5.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-0007902_42	195103.CPF_0957	58.5	0.000000000745	N/A	N/A
PHROG	UHGV-0007902_43	phrog_541	92.2	4.5e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0007902_43	742740.HMPREF9474_03507	179.0	0	N/A	N/A
PHROG	UHGV-0007902_44	phrog_8710	136.6	7.20001e-41	N/A	unknown function
eggNOG-mapper	UHGV-0007902_44	742740.HMPREF9474_03508	149.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-0007902_44	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_45	phrog_556	42.5	0.00000000000026	minor head protein	head and packaging
eggNOG-mapper	UHGV-0007902_45	742740.HMPREF9474_03509	151.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0007902_46	phrog_2595	88.8	5.1e-26	head-tail connector protein	connector
UniRef90	UHGV-0007902_46	UniRef90_UPI001C0EB705	213.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0007902_46	483218.BACPEC_01150	126.0	1.51e-35	N/A	N/A
Pfam	UHGV-0007902_46	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0007902_46	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_47	phrog_820	109.4	2.3e-32	major tail protein	tail
eggNOG-mapper	UHGV-0007902_47	33035.JPJF01000093_gene2246	184.0	0	N/A	N/A
structural_annotation	UHGV-0007902_47	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_48	phrog_8300	73.6	2.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0007902_48	33035.JPJF01000093_gene2245	71.6	0.00000000000000564	N/A	N/A
structural_annotation	UHGV-0007902_48	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_49	phrog_8355	102.2	1.9e-30	N/A	unknown function
UniRef90	UHGV-0007902_49	UniRef90_UPI000E5D9789	161.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0007902_49	33035.JPJF01000093_gene2244	84.3	1.95e-20	N/A	N/A
PHROG	UHGV-0007902_50	phrog_1535	261.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0007902_50	UniRef90_A0A1C5PIN9	1116.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0007902_50	33035.JPJF01000093_gene2243	486.0	0	phage tail tape measure protein	N/A
COG	UHGV-0007902_50	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0007902_50	PF11172	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_51	phrog_1194	72.0	7.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0007902_51	33035.JPJF01000093_gene2242	163.0	0	N/A	N/A
structural_annotation	UHGV-0007902_51	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_52	phrog_6616	726.3	0	tail protein	tail
UniRef90	UHGV-0007902_52	UniRef90_A0A415L5E9	985.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0007902_52	1121866.AUGK01000003_gene1439	267.0	0	Phage minor structural protein	N/A
COG	UHGV-0007902_52	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0007902_52	PF05113,PF18432,NF033848,NF011735,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0007902_53	phrog_7389	55.7	5.8e-16	tail fiber protein	tail
eggNOG-mapper	UHGV-0007902_53	445971.ANASTE_00730	70.1	0.00000000000994	nuclear chromosome segregation	N/A
COG	UHGV-0007902_53	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0007902_54	phrog_1863	63.1	6.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0007902_54	1226322.HMPREF1545_04027	69.3	0.0000000000000163	N/A	N/A
PHROG	UHGV-0007902_55	phrog_443	71.7	1.6e-20	holin	lysis
UniRef90	UHGV-0007902_55	UniRef90_UPI000E5CA950	120.0	5.28e-34	holin	N/A
eggNOG-mapper	UHGV-0007902_55	626523.GCWU000342_01012	86.7	2.37e-21	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0007902_55	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0007902_55	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0007902_56	K01447	95.1	9.9e-28	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0007902_56	phrog_3088	183.1	0	amidase	lysis
UniRef90	UHGV-0007902_56	UniRef90_A0A415L5D2	695.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0007902_56	411459.RUMOBE_00909	691.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0007902_56	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-0007902_56	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0007902_56	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0007902_56	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0007902_56	PF01832,NF008758,NF009354,COG5632,COG4193	N/A	N/A	N/A	N/A