UHGV-0009337 (vOTU-082381)

Viral Genome: UHGV-0009337

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0009337
vOTU ID	vOTU-082381
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_A_12_1819__NODE_14_length_358021_cov_24.660522_1_1
Associated BioSample	SAMEA4766056
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	98.22 (High-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9749
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.58
Jumbo phage	No

Genome content
Genome length (bp)	31,243
GC content	45.61%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	93%
Average CDS length (bps)	606.44
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0009337_1	UniRef90_UPI001C3EA605	77.4	1.74e-17	ribbon-helix-helix protein, CopG family	N/A
Pfam	UHGV-0009337_1	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0009337_1	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009337_4	UniRef90_R6IVQ5	65.1	0.0000000000187	SHOCT domain-containing protein	N/A
PHROG	UHGV-0009337_6	phrog_9066	43.1	0.0000000000032	endolysin	lysis
UniRef90	UHGV-0009337_6	UniRef90_R7ID00	159.0	1.35926e-43	SH3 domain protein	N/A
structural_annotation	UHGV-0009337_6	PF01551,PF08460,NF040883,COG0739,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_7	phrog_10091	115.3	3.6e-34	holin	lysis
UniRef90	UHGV-0009337_7	UniRef90_A0A7X2TMW7	132.0	1.72e-38	Phage holin	N/A
eggNOG-mapper	UHGV-0009337_7	1122147.AUEH01000019_gene965	119.0	1.17e-33	Bacteriophage holin	N/A
Pfam	UHGV-0009337_7	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0009337_7	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0009337_7	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009337_7	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_8	phrog_1863	71.9	4.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0009337_8	693746.OBV_18260	94.7	1.95e-24	N/A	N/A
eggNOG-mapper	UHGV-0009337_10	1232449.BAHV02000016_gene1815	67.8	0.00000000935	N/A	N/A
eggNOG-mapper	UHGV-0009337_11	1235802.C823_05264	67.8	0.00000000149	Phage minor structural protein	N/A
COG	UHGV-0009337_11	COG4926	N/A	N/A	Phage-related protein	N/A
COG	UHGV-0009337_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0009337_12	PF05709,PF11699,TIGR01633,NF009806,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0009337_13	K20283	43.3	0.00000000000039	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0009337_13	phrog_23464	197.0	0	N/A	unknown function
UniRef90	UHGV-0009337_13	UniRef90_A0A352DNT9	68.9	0.0000000496	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0009337_13	1378168.N510_03078	142.0	5.49e-32	Tail tape measure protein, TP901 family	N/A
COG	UHGV-0009337_13	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0009337_13	PF20155	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0009337_14	1219626.HMPREF1639_07460	62.4	0.00000000000868	N/A	N/A
structural_annotation	UHGV-0009337_15	PF17388	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_16	phrog_2175	58.9	9.2e-17	protein with Ig domain	other
eggNOG-mapper	UHGV-0009337_16	1219626.HMPREF1639_07450	195.0	0	N/A	N/A
structural_annotation	UHGV-0009337_16	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009337_17	PF05657,TIGR04412	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009337_18	UniRef90_UPI001B3C7D0F	61.6	0.00000000201	HK97 gp10 family phage protein	N/A
Pfam	UHGV-0009337_18	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0009337_18	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_19	phrog_1951	71.7	7.8e-21	head-tail adaptor	connector
UniRef90	UHGV-0009337_19	UniRef90_UPI001C0EC0BE	67.0	0.00000000000285	phage head closure protein	N/A
eggNOG-mapper	UHGV-0009337_19	573061.Clocel_2434	64.3	0.00000000000377	head-tail adaptor	N/A
COG	UHGV-0009337_19	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0009337_19	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_20	phrog_5223	81.4	6.7e-24	neck protein	connector
UniRef90	UHGV-0009337_20	UniRef90_UPI00157A3953	72.4	0.0000000000000128	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0009337_20	198094.BA_0470	73.6	6.46e-16	N/A	N/A
structural_annotation	UHGV-0009337_20	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_21	phrog_10	47.6	0.00000000000024	major head protein	head and packaging
UniRef90	UHGV-0009337_21	UniRef90_A0A1C5W5F9	374.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0009337_21	742740.HMPREF9474_04304	391.0	0	Phage capsid family	N/A
Pfam	UHGV-0009337_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0009337_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0009337_21	PF05065,PF09032,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0009337_22	K06904	99.2	5.2e-29	N/A	N/A
PHROG	UHGV-0009337_22	phrog_80	103.2	3.4e-30	head maturation protease	head and packaging
UniRef90	UHGV-0009337_22	UniRef90_A0A2V2GKJ3	195.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0009337_22	1321814.HMPREF9089_00929	185.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0009337_22	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0009337_22	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0009337_22	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0009337_22	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_23	phrog_12	87.2	1.6e-25	portal protein	head and packaging
UniRef90	UHGV-0009337_23	UniRef90_A0A2V2GK98	469.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0009337_23	411470.RUMGNA_02063	385.0	0	Phage portal protein	N/A
Pfam	UHGV-0009337_23	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0009337_23	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0009337_23	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_24	phrog_9	327.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0009337_24	UniRef90_A0A6N7W8T4	669.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0009337_24	411470.RUMGNA_02062	650.0	0	N/A	N/A
Pfam	UHGV-0009337_24	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0009337_24	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0009337_24	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0009337_24	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_25	phrog_1066	103.0	1.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-0009337_25	397290.C810_00417	109.0	1.5e-29	N/A	N/A
structural_annotation	UHGV-0009337_25	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_26	phrog_144	42.2	0.000000000013	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009337_26	UniRef90_A0A5C0SEJ8	82.8	1.74e-18	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0009337_26	1203606.HMPREF1526_01332	86.7	9.66e-21	HNH nucleases	N/A
COG	UHGV-0009337_26	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0009337_26	NF008448	N/A	N/A	N/A	N/A
Pfam	UHGV-0009337_28	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0009337_28	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0009337_30	phrog_824	132.3	1.9e-39	N/A	unknown function
UniRef90	UHGV-0009337_30	UniRef90_A0A3B8VJR3	139.0	3.04e-40	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0009337_30	97139.C824_00735	131.0	1.29e-37	VRR-NUC domain	N/A
Pfam	UHGV-0009337_30	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0009337_30	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_31	phrog_3584	121.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009337_31	UniRef90_R6RCC6	196.0	0	Gp31	N/A
eggNOG-mapper	UHGV-0009337_31	1414720.CBYM010000002_gene589	113.0	4.62e-27	N/A	N/A
structural_annotation	UHGV-0009337_31	PF21578,NF033538	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0009337_32	500632.CLONEX_00691	58.2	0.0000000532	Replication initiator protein A	N/A
KOfam	UHGV-0009337_34	K03111	90.6	2.8e-26	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0009337_34	phrog_44	103.5	2.6e-30	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009337_34	UniRef90_A0A350IHS4	105.0	2.73e-26	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0009337_34	1278306.KB906914_gene1072	101.0	1.52e-25	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0009337_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0009337_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0009337_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0009337_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0009337_34	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_37	phrog_954	212.7	0	DNA methyltransferase	other
UniRef90	UHGV-0009337_37	UniRef90_UPI00189C6FDE	233.0	0	methyltransferase	N/A
eggNOG-mapper	UHGV-0009337_37	445970.ALIPUT_02675	210.0	0	methyltransferase	N/A
PADLOC	UHGV-0009337_37	MTase_II_00074	225.2	0	Type II methyltransferase	RM
Pfam	UHGV-0009337_37	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0009337_37	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0009337_37	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_38	phrog_15609	250.1	0	N/A	unknown function
UniRef90	UHGV-0009337_38	UniRef90_UPI001C12751D	145.0	2.42e-37	N/A	N/A
eggNOG-mapper	UHGV-0009337_38	1123288.SOV_1c10530	142.0	3.83e-37	N/A	N/A
Pfam	UHGV-0009337_38	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0009337_38	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0009337_38	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_39	phrog_8470	251.0	0	N/A	unknown function
UniRef90	UHGV-0009337_39	UniRef90_UPI0002D9F0BD	270.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0009337_39	1007096.BAGW01000031_gene117	270.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0009337_39	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0009337_39	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_40	phrog_36399	105.4	3.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-0009337_40	1226322.HMPREF1545_00099	94.0	1.72e-23	N/A	N/A
UniRef90	UHGV-0009337_45	UniRef90_UPI00041C5CBE	79.3	4.7e-18	N/A	N/A
eggNOG-mapper	UHGV-0009337_45	626523.GCWU000342_01049	70.9	0.00000000000000164	N/A	N/A
Pfam	UHGV-0009337_45	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0009337_45	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0009337_45	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0009337_46	K22300	50.8	0.000000000000033	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0009337_46	phrog_8	55.3	0.0000000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0009337_46	UniRef90_A0A173TYA7	83.6	2.45e-17	Bifunctional HTH-domain containing protein/aminotransferase	N/A
eggNOG-mapper	UHGV-0009337_46	1262914.BN533_00809	79.0	7.75e-16	Peptidase S24-like	N/A
Pfam	UHGV-0009337_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0009337_46	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0009337_46	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0009337_47	phrog_87	77.4	1.3e-22	metallo-protease	other
UniRef90	UHGV-0009337_47	UniRef90_A0A6I3PUM5	115.0	4.63e-29	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0009337_47	445971.ANASTE_00176	83.6	2.25e-17	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0009337_47	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0009337_47	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0009337_47	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0009337_48	K06400	390.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0009337_48	phrog_95	390.2	0	integrase	integration and excision
UniRef90	UHGV-0009337_48	UniRef90_A0A3D5IA24	523.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0009337_48	445972.ANACOL_03320	401.0	0	N/A	N/A
Pfam	UHGV-0009337_48	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0009337_48	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0009337_48	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0009337_48	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0009337_48	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A