UHGV-0009551 (vOTU-042552)

Viral Genome: UHGV-0009551

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0009551
vOTU ID	vOTU-042552
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_E_2_1148__NODE_770_length_42409_cov_11.998276
Associated BioSample	SAMEA4765608
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9787
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.39
Jumbo phage	No

Genome content
Genome length (bp)	42,353
GC content	52.87%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	69
CDS density	90%
Average CDS length (bps)	554.87
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0009551_1	phrog_16490	52.5	2.9e-23	N/A	unknown function
eggNOG-mapper	UHGV-0009551_1	1408437.JNJN01000043_gene803	75.1	0.000000000000138	N/A	N/A
KOfam	UHGV-0009551_5	K23779	46.9	0.00000000000056	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
Pfam	UHGV-0009551_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0009551_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0009551_5	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009551_7	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_9	phrog_15303	113.0	1.4e-33	N/A	unknown function
Pfam	UHGV-0009551_9	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
PHROG	UHGV-0009551_10	phrog_1863	76.0	2.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0009551_10	718252.FP2_04900	146.0	4.2039e-45	N/A	N/A
KOfam	UHGV-0009551_11	K07273	170.5	0	acm; lysozyme	N/A
PHROG	UHGV-0009551_11	phrog_291	135.9	3.60001e-40	endolysin	lysis
UniRef90	UHGV-0009551_11	UniRef90_UPI001D0EE7D8	255.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0009551_11	748224.HMPREF9436_00154	240.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0009551_11	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0009551_11	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0009551_11	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_12	phrog_11541	45.0	0.00000000000048	N/A	unknown function
eggNOG-mapper	UHGV-0009551_12	761193.Runsl_0319	102.0	7.91e-20	N/A	N/A
PHROG	UHGV-0009551_14	phrog_1067	172.5	0	minor head protein	head and packaging
UniRef90	UHGV-0009551_14	UniRef90_A0A2A7AM44	711.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0009551_14	1123263.AUKY01000068_gene489	192.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0009551_14	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0009551_14	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0009551_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0009551_14	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_15	phrog_33	76.0	8.6e-22	distal tail protein Dit	tail
UniRef90	UHGV-0009551_15	UniRef90_A0A173Z1X4	143.0	1.38e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-0009551_15	1487921.DP68_11370	91.7	1.33e-19	tail component	N/A
NCBIFam	UHGV-0009551_15	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0009551_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0009551_15	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_16	phrog_9959	87.9	6.3e-26	tail length tape measure protein	tail
UniRef90	UHGV-0009551_16	UniRef90_A0A2A7ALS3	673.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0009551_16	596328.HMPREF0578_1241	168.0	7.26e-40	phage tail tape measure protein	N/A
Pfam	UHGV-0009551_16	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0009551_16	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0009551_16	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0009551_16	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_19	phrog_88	91.1	1.3e-26	major tail protein	tail
UniRef90	UHGV-0009551_19	UniRef90_G9YSC5	107.0	8.91e-26	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0009551_19	349161.Dred_2600	66.6	0.000000000149	N/A	N/A
NCBIFam	UHGV-0009551_19	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0009551_19	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_20	phrog_5	47.8	0.00000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-0009551_20	UniRef90_A0A1C6FG30	115.0	9.71e-30	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0009551_20	908340.HMPREF9406_2573	110.0	1.76e-28	N/A	N/A
structural_annotation	UHGV-0009551_20	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0009551_21	999413.HMPREF1094_02005	65.9	0.00000000000161	N/A	N/A
structural_annotation	UHGV-0009551_21	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_22	phrog_19734	91.3	9.2e-27	N/A	unknown function
UniRef90	UHGV-0009551_22	UniRef90_A0A0D8I708	79.7	1.33e-16	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0009551_22	349161.Dred_2602	73.9	0.00000000000000388	N/A	N/A
structural_annotation	UHGV-0009551_22	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_23	phrog_749	54.3	0.0000000000000021	N/A	unknown function
UniRef90	UHGV-0009551_23	UniRef90_UPI00099504CB	54.7	0.000000184	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0009551_23	349161.Dred_2603	86.3	1.32e-20	N/A	N/A
PHROG	UHGV-0009551_24	phrog_10	128.4	4.5e-38	major head protein	head and packaging
UniRef90	UHGV-0009551_24	UniRef90_A0A2A7B712	719.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0009551_24	1235792.C808_00086	444.0	0	Phage capsid family	N/A
Pfam	UHGV-0009551_24	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0009551_24	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0009551_24	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0009551_24	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0009551_24	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0009551_25	K01358	75.8	7.4e-22	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0009551_25	phrog_94	126.8	2.4e-37	head maturation protease	head and packaging
UniRef90	UHGV-0009551_25	UniRef90_UPI00111E41DA	130.0	8.86e-34	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0009551_25	1232452.BAIB02000007_gene1626	124.0	6.41e-32	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0009551_25	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0009551_25	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0009551_25	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_26	phrog_12	128.2	5.9e-38	portal protein	head and packaging
UniRef90	UHGV-0009551_26	UniRef90_A0A2A7B6S8	549.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0009551_26	349161.Dred_2606	262.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0009551_26	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0009551_26	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0009551_26	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0009551_26	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_27	phrog_9	239.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0009551_27	UniRef90_A0A2A7ALT4	1065.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0009551_27	610130.Closa_0741	638.0	0	Phage Terminase	N/A
Pfam	UHGV-0009551_27	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0009551_27	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0009551_27	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_28	phrog_13845	56.2	4.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0009551_28	1399942.U3PDR2_9CAUD	66.2	0.00000000000226	N/A	N/A
structural_annotation	UHGV-0009551_28	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_29	phrog_119	56.8	3.3e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009551_29	UniRef90_A0A2A7B6I3	234.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0009551_29	610130.Closa_0739	108.0	3.13e-29	HNH nucleases	N/A
Pfam	UHGV-0009551_29	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0009551_29	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0009551_32	phrog_3136	132.1	1.3e-39	N/A	unknown function
UniRef90	UHGV-0009551_32	UniRef90_A0A329TS47	132.0	2.03e-35	ASCH domain-containing protein	N/A
COG	UHGV-0009551_32	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0009551_32	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_35	phrog_7711	111.4	5.1e-33	N/A	unknown function
eggNOG-mapper	UHGV-0009551_35	1304866.K413DRAFT_1204	115.0	5.17e-31	N/A	N/A
structural_annotation	UHGV-0009551_38	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0009551_39	K03497	92.7	6.7e-27	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0009551_39	phrog_4715	119.6	2.5e-35	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009551_39	UniRef90_A0A2A7AMC5	300.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0009551_39	411471.SUBVAR_05842	180.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0009551_39	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0009551_39	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0009551_39	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0009551_41	K03496	206.8	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0009551_41	phrog_164	153.8	1.4013e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009551_41	UniRef90_A0A2A7B6H3	358.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0009551_41	411471.SUBVAR_05839	229.0	0	AAA domain	N/A
Pfam	UHGV-0009551_41	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0009551_41	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0009551_41	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_42	phrog_6969	50.8	0.000000000000022	N/A	unknown function
eggNOG-mapper	UHGV-0009551_42	1232446.BAIE02000002_gene816	72.0	0.00000000000558	N/A	N/A
Pfam	UHGV-0009551_42	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-0009551_42	PF04182,MF_01819,TIGR04176,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0009551_43	K03111	145.7	4.49817e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0009551_43	phrog_44	148.3	4.06377e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009551_43	UniRef90_A0A2A7ALU9	204.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0009551_43	748224.HMPREF9436_00638	214.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0009551_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0009551_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0009551_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0009551_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0009551_43	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_44	phrog_7566	86.7	1.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-0009551_44	411471.SUBVAR_05830	107.0	5.55e-29	N/A	N/A
PHROG	UHGV-0009551_46	phrog_72	46.0	0.00000000000093	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0009551_46	411471.SUBVAR_05829	137.0	2.08e-38	N/A	N/A
structural_annotation	UHGV-0009551_46	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_47	phrog_14970	45.3	0.0000000000016	N/A	unknown function
COG	UHGV-0009551_47	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0009551_47	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009551_49	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
KOfam	UHGV-0009551_54	K14060	110.7	6.9e-33	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0009551_54	phrog_125	149.4	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009551_54	UniRef90_A0A0D8IU11	254.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0009551_54	1297617.JPJD01000058_gene1031	247.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0009551_54	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0009551_54	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0009551_57	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009551_58	UniRef90_A0A2A7AM72	155.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0009551_58	1378168.N510_01712	76.6	0.0000000000000019	N/A	N/A
structural_annotation	UHGV-0009551_58	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009551_59	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0009551_62	394503.Ccel_2974	65.5	0.00000000223	N/A	N/A
structural_annotation	UHGV-0009551_62	PF06776,COG5342	N/A	N/A	N/A	N/A
PHROG	UHGV-0009551_65	phrog_1373	43.3	0.0000000000022	transcriptional regulator	transcription regulation
UniRef90	UHGV-0009551_65	UniRef90_A0A2A7AM70	183.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0009551_65	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0009551_65	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0009551_65	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0009551_66	K14059	180.1	0	int; integrase	N/A
PHROG	UHGV-0009551_66	phrog_1	163.0	0	integrase	integration and excision
UniRef90	UHGV-0009551_66	UniRef90_A0A367GI93	222.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0009551_66	1507.HMPREF0262_00307	160.0	4.9606e-43	Phage integrase family	N/A
Pfam	UHGV-0009551_66	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0009551_66	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0009551_66	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0009551_67	1408437.JNJN01000043_gene801	99.0	5.85e-23	N/A	N/A
eggNOG-mapper	UHGV-0009551_68	1408437.JNJN01000043_gene802	113.0	9.88e-31	N/A	N/A
PHROG	UHGV-0009551_69	phrog_16490	49.8	0.000000000000057	N/A	unknown function
eggNOG-mapper	UHGV-0009551_69	1226322.HMPREF1545_00076	80.1	1.56e-17	N/A	N/A