Viral Genome: UHGV-0009558


Overview
UHGV ID UHGV-0009558
vOTU ID vOTU-076125
Representative Genome? Yes
Source Hadza
Original genome ID Nepal_MoBio_Fiber-Hadza-Nepal_F_15_RAU1013YZ__NODE_1063_length_56990_cov_31.746121_1
Associated BioSample SAMEA4969174
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 94.34 (High-quality)
Trimmed provirus No
CheckV viral markers 20
CheckV host markers 1
Recoded stop codon No
Viral Content
geNomad score 0.9784
Virus hallmark genes (geNomad) 11
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 50.59
Jumbo phage No

Genome content
Genome length (bp) 52,989
GC content 32.84%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 91
CDS density 93%
Average CDS length (bps) 542.21
Total tRNA genes 1
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 94.34)
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