UHGV-0009706 (vOTU-095639)

Viral Genome: UHGV-0009706

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0009706
vOTU ID	vOTU-095639
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_B_7_1597__NODE_1171_length_26429_cov_4.524021
Associated BioSample	SAMEA4765882
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.85 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.78
Jumbo phage	No

Genome content
Genome length (bp)	26,429
GC content	39.87%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	40
CDS density	93%
Average CDS length (bps)	611.63
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0009706_1	phrog_6616	600.4	0	tail protein	tail
UniRef90	UHGV-0009706_1	UniRef90_A0A0J1FXD9	296.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0009706_1	1121866.AUGK01000003_gene1439	249.0	0	Phage minor structural protein	N/A
COG	UHGV-0009706_1	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0009706_1	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_2	phrog_1194	79.6	3.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0009706_2	33035.JPJF01000093_gene2242	157.0	0	N/A	N/A
structural_annotation	UHGV-0009706_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_3	phrog_1535	534.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0009706_3	UniRef90_A0A1C5PIN9	615.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0009706_3	33035.JPJF01000093_gene2243	477.0	0	phage tail tape measure protein	N/A
COG	UHGV-0009706_3	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0009706_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_4	phrog_8355	97.5	5.5e-29	N/A	unknown function
UniRef90	UHGV-0009706_4	UniRef90_UPI001C10E2B7	163.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0009706_4	483218.BACPEC_01147	86.3	3.03e-21	Bacteriophage Gp15 protein	N/A
structural_annotation	UHGV-0009706_4	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_5	phrog_8300	81.5	8.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0009706_5	483218.BACPEC_01148	67.0	0.000000000000443	N/A	N/A
structural_annotation	UHGV-0009706_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_6	phrog_820	101.6	6.3e-30	major tail protein	tail
eggNOG-mapper	UHGV-0009706_6	33035.JPJF01000093_gene2246	193.0	0	N/A	N/A
structural_annotation	UHGV-0009706_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_7	phrog_2595	86.9	1.9e-25	head-tail connector protein	connector
UniRef90	UHGV-0009706_7	UniRef90_UPI001C10E28D	236.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0009706_7	483218.BACPEC_01150	125.0	2.93e-35	N/A	N/A
Pfam	UHGV-0009706_7	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0009706_7	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_8	phrog_556	53.6	0.0000000000000038	minor head protein	head and packaging
eggNOG-mapper	UHGV-0009706_8	742740.HMPREF9474_03509	160.0	0	N/A	N/A
PHROG	UHGV-0009706_9	phrog_8710	131.7	2.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0009706_9	742740.HMPREF9474_03508	132.0	1.23e-38	N/A	N/A
structural_annotation	UHGV-0009706_9	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_10	phrog_541	95.5	4.1e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0009706_10	742740.HMPREF9474_03507	202.0	0	N/A	N/A
PHROG	UHGV-0009706_11	phrog_15682	68.1	1.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0009706_11	469618.FVAG_01311	73.2	9.01e-16	N/A	N/A
PHROG	UHGV-0009706_12	phrog_212	287.4	0	major head protein	head and packaging
UniRef90	UHGV-0009706_12	UniRef90_UPI001C11B7FF	613.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0009706_12	1151292.QEW_2433	500.0	0	N/A	N/A
structural_annotation	UHGV-0009706_12	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_13	phrog_194	159.3	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0009706_13	UniRef90_UPI001C10C492	336.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0009706_13	1262449.CP6013_3198	155.0	5.60519e-45	Phage minor structural protein GP20	N/A
Pfam	UHGV-0009706_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0009706_13	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_15	phrog_478	118.7	2.7e-35	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0009706_15	UniRef90_R6R5K5	145.0	2.5896e-42	Protein 64 protein	N/A
eggNOG-mapper	UHGV-0009706_15	1111121.HMPREF1247_0834	143.0	2.81941e-42	N/A	N/A
PHROG	UHGV-0009706_16	phrog_872	78.5	9.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0009706_16	397290.C810_05225	108.0	1.38e-28	N/A	N/A
dbAPIS	UHGV-0009706_16	APIS052	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009706_17	PF11344	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009706_18	UniRef90_UPI0009303339	679.0	0	putative zinc-binding metallopeptidase	N/A
eggNOG-mapper	UHGV-0009706_18	875454.BAEW01000002_gene479	102.0	3.69e-20	Phage Mu protein F like protein	N/A
COG	UHGV-0009706_18	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_19	phrog_59	138.8	1.90002e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009706_19	UniRef90_A0A7V6TM88	229.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0009706_19	1206110.L0P6F5_9CAUD	141.0	1.47e-39	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-0009706_19	HEase_00016	116.7	2.3e-34	homing endonuclease	RM
Pfam	UHGV-0009706_19	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0009706_19	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-0009706_19	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-0009706_19	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009706_21	UniRef90_UPI0011C722A7	60.5	0.0000000000677	ribbon-helix-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0009706_21	663952.SDD27957_09060	50.8	0.0000000666	N/A	N/A
structural_annotation	UHGV-0009706_21	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_22	phrog_581	205.5	0	minor head protein	head and packaging
UniRef90	UHGV-0009706_22	UniRef90_A0A416Q253	429.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0009706_22	33035.JPJF01000093_gene2255	379.0	0	N/A	N/A
Pfam	UHGV-0009706_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0009706_22	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0009706_22	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_23	phrog_25639	124.5	2.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0009706_23	742740.HMPREF9474_03502	99.4	1.67e-26	N/A	N/A
PHROG	UHGV-0009706_24	phrog_533	267.9	0	portal protein	head and packaging
UniRef90	UHGV-0009706_24	UniRef90_UPI001C0F908C	1000.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0009706_24	1122918.KB907248_gene4503	517.0	0	N/A	N/A
structural_annotation	UHGV-0009706_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0009706_25	K06909	65.7	7.9e-19	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0009706_25	phrog_2	55.9	0.000000000000001	terminase large subunit	head and packaging
UniRef90	UHGV-0009706_25	UniRef90_UPI001C114A0D	869.0	0	terminase	N/A
eggNOG-mapper	UHGV-0009706_25	1298920.KI911353_gene4856	583.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0009706_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0009706_25	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0009706_26	K07474	137.5	1.7e-40	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0009706_26	phrog_51	155.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-0009706_26	UniRef90_UPI001C110B24	280.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0009706_26	1298920.KI911353_gene4857	206.0	0	Terminase small subunit	N/A
Pfam	UHGV-0009706_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0009706_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0009706_26	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_27	phrog_36	54.4	0.0000000000000028	transcriptional regulator	transcription regulation
UniRef90	UHGV-0009706_27	UniRef90_R6ZAS5	129.0	1.98e-35	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-0009706_27	411490.ANACAC_00789	129.0	3.63e-36	N/A	N/A
structural_annotation	UHGV-0009706_27	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_28	phrog_6568	66.3	3.4e-19	N/A	unknown function
PHROG	UHGV-0009706_30	phrog_1455	72.2	3.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0009706_30	1033738.CAEP01000047_gene542	59.3	0.0000000000431	N/A	N/A
Pfam	UHGV-0009706_30	PF21793	N/A	N/A	N/A	DUF6877
structural_annotation	UHGV-0009706_30	PF21793	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_33	phrog_17690	49.4	0.000000000000067	N/A	unknown function
eggNOG-mapper	UHGV-0009706_33	665950.HMPREF1025_02546	67.4	0.000000000000202	N/A	N/A
PHROG	UHGV-0009706_34	phrog_2562	152.6	2.8026e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009706_34	UniRef90_A0A415UCS3	445.0	0	N/A	N/A
eggNOG-mapper	UHGV-0009706_34	537013.CLOSTMETH_01717	185.0	0	N/A	N/A
Pfam	UHGV-0009706_34	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0009706_34	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0009706_34	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-0009706_35	K01160	53.3	0.0000000000000071	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0009706_35	phrog_140	131.4	5e-39	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009706_35	UniRef90_A0A415UCR1	265.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0009706_35	857293.CAAU_0790	147.0	8.68805e-44	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0009706_35	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0009706_35	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0009706_35	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_36	phrog_1029	265.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0009706_36	411461.DORFOR_00016	241.0	0	N/A	N/A
structural_annotation	UHGV-0009706_36	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_37	phrog_997	141.2	3.99931e-42	replication terminator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0009706_37	411461.DORFOR_00017	145.0	5.85743e-43	N/A	N/A
PHROG	UHGV-0009706_38	phrog_2760	214.3	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009706_38	UniRef90_A0A415G8D8	441.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0009706_38	536233.CLO_0507	213.0	0	Phage recombination protein Bet	N/A
Pfam	UHGV-0009706_38	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0009706_38	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0009706_38	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0009706_38	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_39	phrog_674	160.4	0	N/A	unknown function
UniRef90	UHGV-0009706_39	UniRef90_UPI001ADDD22D	486.0	0	N/A	N/A
eggNOG-mapper	UHGV-0009706_39	742740.HMPREF9474_03487	210.0	0	N/A	N/A
Pfam	UHGV-0009706_39	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0009706_39	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0009706_40	phrog_434	170.5	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009706_40	UniRef90_A0A415G8D6	415.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0009706_40	1095750.HMPREF9970_1677	276.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0009706_40	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0009706_40	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0009706_40	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0009706_40	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A