UHGV-0010894 (vOTU-148325)

Viral Genome: UHGV-0010894

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0010894
vOTU ID	vOTU-148325
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_PheChl_Fiber-Hadza-Nepal_C_8_2273__NODE_4181_length_27735_cov_4.261082_1
Associated BioSample	SAMEA4766207
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.73 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9824
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.74
Jumbo phage	No

Genome content
Genome length (bp)	22,289
GC content	42.85%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	31
CDS density	95%
Average CDS length (bps)	681.87
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.73)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0010894_1	phrog_8680	93.8	1.3e-27	N/A	unknown function
UniRef90	UHGV-0010894_1	UniRef90_UPI0012905C33	99.4	3.49e-25	N/A	N/A
eggNOG-mapper	UHGV-0010894_1	1229517.AMFD01000023_gene1324	118.0	3.5e-32	N/A	N/A
Pfam	UHGV-0010894_1	PF14386	N/A	N/A	N/A	DUF4417
PHROG	UHGV-0010894_2	phrog_2579	53.2	0.0000000000000043	ParB C-terminal domain	DNA, RNA and nucleotide metabolism
KOfam	UHGV-0010894_4	K06909	429.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0010894_4	phrog_3717	186.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0010894_4	UniRef90_A0A1C7I418	602.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0010894_4	33035.JPJF01000106_gene3136	595.0	0	Terminase small subunit	N/A
Pfam	UHGV-0010894_4	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0010894_4	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0010894_4	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0010894_4	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0010894_4	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_5	phrog_533	288.1	0	portal protein	head and packaging
UniRef90	UHGV-0010894_5	UniRef90_A0A1C5MB20	547.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0010894_5	33035.JPJF01000106_gene3135	449.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0010894_5	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_6	phrog_374	221.2	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010894_6	UniRef90_A0A7W0C2S3	201.0	0	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0010894_6	742767.HMPREF9456_02044	207.0	0	N/A	N/A
structural_annotation	UHGV-0010894_6	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_7	phrog_556	59.9	3.2e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0010894_7	1235790.C805_00048	98.2	1.77e-23	N/A	N/A
Pfam	UHGV-0010894_7	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0010894_7	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_8	phrog_581	221.5	0	minor head protein	head and packaging
UniRef90	UHGV-0010894_8	UniRef90_A0A3D4T830	149.0	4.05e-36	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0010894_8	1235790.C805_00050	234.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0010894_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0010894_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010894_8	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_9	phrog_3754	97.5	3.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0010894_9	476272.RUMHYD_01764	139.0	4.77002e-41	N/A	N/A
UniRef90	UHGV-0010894_10	UniRef90_A0A395X7A4	104.0	3.96e-27	CTP synthase	N/A
eggNOG-mapper	UHGV-0010894_10	476272.RUMHYD_01766	98.2	1.75e-25	N/A	N/A
UniRef90	UHGV-0010894_11	UniRef90_A0A6N2TVE6	61.2	0.0000000000893	HTH_11 domain-containing protein	N/A
eggNOG-mapper	UHGV-0010894_11	1235790.C805_00057	61.6	0.00000000000694	N/A	N/A
structural_annotation	UHGV-0010894_11	PF13404,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_12	phrog_28328	47.0	0.0000000000003	N/A	unknown function
eggNOG-mapper	UHGV-0010894_12	428125.CLOLEP_01381	55.1	0.00000000962	N/A	N/A
PHROG	UHGV-0010894_13	phrog_21718	100.5	1.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-0010894_13	397290.C810_05210	97.8	1.04e-23	N/A	N/A
PHROG	UHGV-0010894_14	phrog_22984	78.6	6.4e-23	N/A	unknown function
PHROG	UHGV-0010894_15	phrog_16490	96.2	2.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0010894_15	476272.RUMHYD_01770	140.0	2e-38	N/A	N/A
PHROG	UHGV-0010894_17	phrog_28802	89.0	2.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-0010894_17	476272.RUMHYD_01772	95.5	1.05e-22	N/A	N/A
PHROG	UHGV-0010894_18	phrog_194	77.5	2.2e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-0010894_18	UniRef90_UPI001D14C9C8	130.0	1.29e-34	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0010894_18	693746.OBV_18080	106.0	4.67e-26	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0010894_18	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0010894_18	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_19	phrog_544	149.5	1.96182e-44	major head protein	head and packaging
UniRef90	UHGV-0010894_19	UniRef90_A0A810PZM2	317.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0010894_19	1347392.CCEZ01000005_gene1236	215.0	0	N/A	N/A
structural_annotation	UHGV-0010894_19	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_20	phrog_541	86.0	3.3e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0010894_20	397290.C810_05226	107.0	2.82e-27	N/A	N/A
PHROG	UHGV-0010894_21	phrog_1129	68.1	9e-20	holin	lysis
UniRef90	UHGV-0010894_21	UniRef90_A0A416MDZ9	136.0	2.72e-40	Enolase	N/A
eggNOG-mapper	UHGV-0010894_21	742740.HMPREF9474_03522	126.0	5.48e-37	N/A	N/A
Pfam	UHGV-0010894_21	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0010894_21	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_22	phrog_3366	95.9	3.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0010894_22	476272.RUMHYD_01779	141.0	4.36995e-41	N/A	N/A
structural_annotation	UHGV-0010894_22	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_23	phrog_3266	74.9	8.4e-22	tail completion	connector
eggNOG-mapper	UHGV-0010894_23	476272.RUMHYD_01781	170.0	0	N/A	N/A
structural_annotation	UHGV-0010894_23	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_24	phrog_3099	136.6	1.4e-40	N/A	unknown function
UniRef90	UHGV-0010894_24	UniRef90_A0A7M3SAI1	113.0	5.73e-28	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0010894_24	1160721.RBI_II00532	135.0	2.01e-38	N/A	N/A
structural_annotation	UHGV-0010894_24	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_25	phrog_11299	117.3	1.1e-34	N/A	unknown function
eggNOG-mapper	UHGV-0010894_25	411459.RUMOBE_01382	102.0	3.38e-26	N/A	N/A
structural_annotation	UHGV-0010894_25	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_26	phrog_706	117.2	1.1e-34	N/A	unknown function
UniRef90	UHGV-0010894_26	UniRef90_UPI001C0F2CC6	191.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0010894_26	411459.RUMOBE_01383	179.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0010894_26	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0010894_26	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_27	phrog_1535	151.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0010894_27	UniRef90_A0A810PX76	117.0	1.06e-23	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0010894_27	1298920.KI911353_gene2068	134.0	2.25e-29	domain protein	N/A
COG	UHGV-0010894_27	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_28	phrog_1194	63.1	4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0010894_28	483218.BACPEC_01144	96.7	6.57e-24	N/A	N/A
Pfam	UHGV-0010894_28	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0010894_28	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_29	phrog_18190	555.5	0	N/A	unknown function
UniRef90	UHGV-0010894_29	UniRef90_UPI001D0767E1	445.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-0010894_29	1235790.C805_00089	369.0	0	N/A	N/A
structural_annotation	UHGV-0010894_29	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0010894_31	phrog_17196	119.5	1.8e-35	kinase	other
UniRef90	UHGV-0010894_31	UniRef90_A0A3R6GQJ1	137.0	3.7e-31	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0010894_31	397290.C810_05240	147.0	1.31e-37	N/A	N/A
structural_annotation	UHGV-0010894_31	PF13619	N/A	N/A	N/A	N/A