UHGV-0010895 (vOTU-148324)

Viral Genome: UHGV-0010895

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0010895
vOTU ID	vOTU-148324
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_PheChl_Fiber-Hadza-Nepal_C_8_2273__NODE_3110_length_33524_cov_5.011541_1
Associated BioSample	SAMEA4766207
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.98 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	4
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9773
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	10.23
Jumbo phage	No

Genome content
Genome length (bp)	16,404
GC content	42.90%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	21
CDS density	94%
Average CDS length (bps)	737.14
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.98)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0010895_1	K07483	41.0	0.000000000046	K07483; transposase	N/A
UniRef90	UHGV-0010895_1	UniRef90_A0A3A9C2J1	105.0	1.68e-28	Transposase	N/A
eggNOG-mapper	UHGV-0010895_1	272626.pli0077	82.8	3.69e-20	Helix-turn-helix domain	N/A
Pfam	UHGV-0010895_1	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0010895_1	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
PHROG	UHGV-0010895_2	phrog_29609	85.5	4e-25	N/A	unknown function
UniRef90	UHGV-0010895_2	UniRef90_A0A3R6V015	110.0	6.27e-28	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0010895_2	877411.JMMA01000002_gene2677	134.0	1.04e-36	N/A	N/A
Pfam	UHGV-0010895_2	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
UniRef90	UHGV-0010895_3	UniRef90_UPI000C762A87	71.6	0.0000000000101	phage scaffolding protein	N/A
structural_annotation	UHGV-0010895_3	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0010895_4	phrog_544	288.9	0	major head protein	head and packaging
UniRef90	UHGV-0010895_4	UniRef90_UPI000F53CC4F	350.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0010895_4	1499683.CCFF01000017_gene2147	332.0	0	N/A	N/A
NCBIFam	UHGV-0010895_4	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0010895_4	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0010895_5	phrog_541	53.7	0.0000000000000036	head-tail adaptor	connector
structural_annotation	UHGV-0010895_7	PF16724	N/A	N/A	N/A	N/A
PHROG	UHGV-0010895_8	phrog_556	40.3	0.000000000045	minor head protein	head and packaging
eggNOG-mapper	UHGV-0010895_8	1449050.JNLE01000003_gene3886	54.7	0.000000225	N/A	N/A
Pfam	UHGV-0010895_8	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0010895_8	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0010895_9	phrog_3099	68.0	1.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0010895_9	665956.HMPREF1032_03060	139.0	3.75e-39	N/A	N/A
structural_annotation	UHGV-0010895_9	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0010895_10	phrog_11299	42.6	0.000000000011	N/A	unknown function
PHROG	UHGV-0010895_11	phrog_706	85.9	5e-25	N/A	unknown function
UniRef90	UHGV-0010895_11	UniRef90_A0A1I0K8S4	104.0	9.6e-25	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0010895_11	1226322.HMPREF1545_00058	110.0	6.07e-28	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0010895_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0010895_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0010895_12	phrog_1535	102.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0010895_12	1226322.HMPREF1545_00059	111.0	3.43e-22	tape measure	N/A
COG	UHGV-0010895_12	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
eggNOG-mapper	UHGV-0010895_13	693746.OBV_18200	84.7	3.07e-19	N/A	N/A
structural_annotation	UHGV-0010895_13	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0010895_14	phrog_13879	176.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0010895_14	693746.OBV_18210	222.0	0	N/A	N/A
structural_annotation	UHGV-0010895_14	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0010895_15	phrog_18725	47.0	0.00000000000035	N/A	unknown function
eggNOG-mapper	UHGV-0010895_15	693746.OBV_18220	57.4	0.0000000314	N/A	N/A
eggNOG-mapper	UHGV-0010895_19	1120998.AUFC01000030_gene2248	67.0	0.00000000712	N/A	N/A
PHROG	UHGV-0010895_21	phrog_199	66.6	3.1e-19	holin	lysis
UniRef90	UHGV-0010895_21	UniRef90_UPI00164BD6C2	128.0	3.41e-35	phage holin family protein	N/A
eggNOG-mapper	UHGV-0010895_21	1160721.RBI_I01565	126.0	4.37e-35	Bacteriophage holin family	N/A
Pfam	UHGV-0010895_21	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0010895_21	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0010895_21	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0010895_21	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A