UHGV-0011758 (vOTU-135752)

Viral Genome: UHGV-0011758

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0011758
vOTU ID	vOTU-135752
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_C_6_1128__k127_78575__flag_0__multi_52.7635__len_22558
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.56 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.981
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.76
Jumbo phage	No

Genome content
Genome length (bp)	22,558
GC content	53.05%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	34
CDS density	91%
Average CDS length (bps)	605.38
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.56)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0011758_2	UniRef90_U2R3C0	170.0	0	Nascent polypeptide-associated complex domain protein	N/A
eggNOG-mapper	UHGV-0011758_2	1226322.HMPREF1545_00042	170.0	0	N/A	N/A
structural_annotation	UHGV-0011758_2	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0011758_3	K06909	119.4	3.4e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0011758_3	phrog_2	121.1	1.4e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0011758_3	UniRef90_A0A3D3Y0N9	418.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0011758_3	1226322.HMPREF1545_00043	395.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0011758_3	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0011758_3	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0011758_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0011758_3	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_4	phrog_533	385.7	0	portal protein	head and packaging
UniRef90	UHGV-0011758_4	UniRef90_A0A1C5N775	696.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0011758_4	1226322.HMPREF1545_00044	668.0	0	N/A	N/A
Pfam	UHGV-0011758_4	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0011758_4	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_6	phrog_8680	231.3	0	N/A	unknown function
UniRef90	UHGV-0011758_6	UniRef90_A0A3R6D7I3	265.0	0	N/A	N/A
eggNOG-mapper	UHGV-0011758_6	411470.RUMGNA_02208	233.0	0	N/A	N/A
Pfam	UHGV-0011758_6	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0011758_6	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_8	phrog_581	301.6	0	minor head protein	head and packaging
UniRef90	UHGV-0011758_8	UniRef90_UPI001D080D49	558.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0011758_8	1226322.HMPREF1545_00046	389.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0011758_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0011758_8	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0011758_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0011758_8	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_9	phrog_194	91.2	1.4e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0011758_9	UniRef90_A0A2Z4Q9Y8	141.0	6.4e-39	Minor structural protein	N/A
eggNOG-mapper	UHGV-0011758_9	1232443.BAIA02000078_gene31	94.7	6.11e-22	N/A	N/A
Pfam	UHGV-0011758_9	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0011758_9	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_10	phrog_212	254.6	0	major head protein	head and packaging
UniRef90	UHGV-0011758_10	UniRef90_A0A354MR33	518.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0011758_10	935836.JAEL01000021_gene1494	340.0	0	N/A	N/A
structural_annotation	UHGV-0011758_10	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_11	phrog_541	108.2	4.6e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0011758_11	642492.Clole_0822	63.9	0.0000000000446	N/A	N/A
PHROG	UHGV-0011758_12	phrog_3366	92.7	3.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0011758_12	1226322.HMPREF1545_00053	149.0	1.96182e-44	N/A	N/A
structural_annotation	UHGV-0011758_12	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_13	phrog_556	66.1	4.4e-19	minor head protein	head and packaging
UniRef90	UHGV-0011758_13	UniRef90_UPI00195E1497	168.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0011758_13	1226322.HMPREF1545_00054	129.0	1.15e-36	Minor capsid protein	N/A
Pfam	UHGV-0011758_13	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0011758_13	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_14	phrog_3266	53.9	0.0000000000000025	tail completion	connector
eggNOG-mapper	UHGV-0011758_14	1232443.BAIA02000078_gene24	145.0	1.6199e-42	N/A	N/A
structural_annotation	UHGV-0011758_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_15	phrog_3099	93.6	2.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0011758_15	1226322.HMPREF1545_00056	251.0	0	N/A	N/A
structural_annotation	UHGV-0011758_15	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_16	phrog_11299	86.8	2.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0011758_16	693746.OBV_18160	148.0	4.90454e-44	N/A	N/A
structural_annotation	UHGV-0011758_16	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_17	phrog_706	122.9	2.2e-36	N/A	unknown function
UniRef90	UHGV-0011758_17	UniRef90_UPI000682A80B	251.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0011758_17	693746.OBV_18170	244.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0011758_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0011758_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_18	phrog_1535	98.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0011758_18	UniRef90_A0A810PX76	138.0	2.02e-30	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0011758_18	1235797.C816_04182	257.0	0	SLT domain	N/A
COG	UHGV-0011758_18	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0011758_18	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_19	phrog_1194	70.0	3.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0011758_19	1120998.AUFC01000030_gene2246	108.0	3.16e-27	N/A	N/A
structural_annotation	UHGV-0011758_19	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_20	phrog_13879	212.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0011758_20	1226322.HMPREF1545_00061	351.0	0	N/A	N/A
structural_annotation	UHGV-0011758_20	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_22	phrog_18725	106.1	2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0011758_22	693746.OBV_18220	150.0	2.52234e-44	N/A	N/A
UniRef90	UHGV-0011758_26	UniRef90_A0A8J6JAX9	58.2	0.00000000023	XkdX family protein	N/A
structural_annotation	UHGV-0011758_26	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_27	phrog_1863	63.8	1.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0011758_27	718252.FP2_04900	108.0	4.95e-30	N/A	N/A
PHROG	UHGV-0011758_29	phrog_1129	69.9	2.5e-20	holin	lysis
UniRef90	UHGV-0011758_29	UniRef90_UPI001EDED0D7	123.0	6.56e-35	phage holin family protein	N/A
eggNOG-mapper	UHGV-0011758_29	693746.OBV_13280	122.0	3.44e-35	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0011758_29	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0011758_29	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0011758_30	K01448	128.5	6.4e-38	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0011758_30	phrog_435	127.9	8.6e-38	endolysin	lysis
UniRef90	UHGV-0011758_30	UniRef90_A0A329MTH0	91.7	1.02e-16	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0011758_30	1382305.AZUC01000009_gene1779	107.0	7.81e-24	Ami_3	N/A
Pfam	UHGV-0011758_30	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0011758_30	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0011758_30	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0011758_30	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0011758_30	PF01520,PF09992,PF01471,MF_00562,TIGR02883,COG0860,COG4632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0011758_32	phrog_3754	114.7	6.1e-34	N/A	unknown function
eggNOG-mapper	UHGV-0011758_32	1226322.HMPREF1545_00073	171.0	0	N/A	N/A
PHROG	UHGV-0011758_33	phrog_21718	113.7	1.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0011758_33	397290.C810_05210	83.2	4.34e-18	N/A	N/A
PHROG	UHGV-0011758_34	phrog_22984	92.1	3.9e-27	N/A	unknown function