Viral Genome: UHGV-0012509


Overview
UHGV ID UHGV-0012509
vOTU ID vOTU-079069
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_PheChl_Fiber-Hadza-Nepal_E_12_1556__NODE_949_length_69139_cov_12.372651_1
Associated BioSample SAMEA4765846
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 95.06 (High-quality)
Trimmed provirus No
CheckV viral markers 32
CheckV host markers 0
Recoded stop codon No
Viral Content
geNomad score 0.9772
Virus hallmark genes (geNomad) 8
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 26.73
Jumbo phage No

Genome content
Genome length (bp) 57,979
GC content 47.36%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 90
CDS density 92%
Average CDS length (bps) 590.53
Total tRNA genes 1
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 95.06)
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