UHGV-0015925 (vOTU-166376)

Viral Genome: UHGV-0015925

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0015925
vOTU ID	vOTU-166376
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_O_4_1196__NODE_3556_length_30000_cov_3.907162
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.04 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9825
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	57.54
Jumbo phage	No

Genome content
Genome length (bp)	30,000
GC content	55.59%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	97%
Average CDS length (bps)	559.85
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0015925_1	K01448	83.3	3.1e-24	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0015925_1	phrog_435	104.7	1.2e-30	endolysin	lysis
UniRef90	UHGV-0015925_1	UniRef90_A0A3D4MUD0	119.0	6.92e-28	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0015925_1	665950.HMPREF1025_02673	129.0	5.93e-31	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0015925_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0015925_1	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
Pfam	UHGV-0015925_1	PF19085	N/A	N/A	Choline-binding repeat	Choline_bind_2
COG	UHGV-0015925_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-0015925_2	phrog_1129	64.5	1.2e-18	holin	lysis
UniRef90	UHGV-0015925_2	UniRef90_A0A1H3XEH1	112.0	1.24e-30	Phage holin family Hol44, holin superfamily V	N/A
eggNOG-mapper	UHGV-0015925_2	1226322.HMPREF1545_00069	115.0	9.08e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0015925_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0015925_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_3	phrog_774	51.2	0.000000000000025	N/A	unknown function
eggNOG-mapper	UHGV-0015925_3	397290.C810_05225	64.7	0.00000000000189	N/A	N/A
PHROG	UHGV-0015925_4	phrog_937	56.6	4.8e-16	hemolysin	other
eggNOG-mapper	UHGV-0015925_4	478749.BRYFOR_07561	72.8	0.00000000000000228	N/A	N/A
PHROG	UHGV-0015925_6	phrog_4757	43.2	0.0000000000058	N/A	unknown function
eggNOG-mapper	UHGV-0015925_6	665956.HMPREF1032_02937	56.2	0.00000101	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0015925_6	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0015925_7	phrog_19280	40.0	0.000000000023	N/A	unknown function
Pfam	UHGV-0015925_7	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0015925_8	phrog_5555	134.4	5.8e-40	tail protein	tail
UniRef90	UHGV-0015925_8	UniRef90_A0A3A6ECU0	282.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0015925_8	1120933.ATUY01000004_gene1009	123.0	8.57e-27	Prophage endopeptidase tail	N/A
Pfam	UHGV-0015925_8	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0015925_8	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0015925_8	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0015925_8	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_9	phrog_33	50.6	0.00000000000004	distal tail protein Dit	tail
structural_annotation	UHGV-0015925_9	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_10	phrog_28775	210.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0015925_10	693746.OBV_25080	231.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0015925_10	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0015925_10	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0015925_10	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0015925_10	PF10145,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_11	phrog_706	97.9	9.2e-29	N/A	unknown function
UniRef90	UHGV-0015925_11	UniRef90_UPI00082E5062	74.3	0.000000000000434	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0015925_11	742723.HMPREF9477_00898	61.6	0.00000000327	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0015925_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0015925_11	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015925_12	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_13	phrog_820	46.3	0.00000000000056	major tail protein	tail
UniRef90	UHGV-0015925_13	UniRef90_A0A412UWV6	110.0	9.89e-27	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0015925_13	411461.DORFOR_01172	108.0	7.93e-28	N/A	N/A
structural_annotation	UHGV-0015925_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_14	phrog_3266	128.2	3.1e-38	tail completion	connector
UniRef90	UHGV-0015925_14	UniRef90_UPI000F637EFF	137.0	6.7e-39	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0015925_14	641112.ACOK01000073_gene2899	113.0	2.41e-30	N/A	N/A
structural_annotation	UHGV-0015925_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_15	phrog_556	62.2	8.7e-18	minor head protein	head and packaging
UniRef90	UHGV-0015925_15	UniRef90_A0A7X2NEE1	73.9	0.00000000000000839	Capsid protein	N/A
eggNOG-mapper	UHGV-0015925_15	536233.CLO_0889	53.1	0.00000018	Minor capsid protein	N/A
Pfam	UHGV-0015925_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0015925_15	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_16	phrog_3366	70.0	3.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0015925_16	645991.Sgly_0343	84.3	3.44e-19	N/A	N/A
structural_annotation	UHGV-0015925_16	PF20536,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_17	phrog_541	43.1	0.0000000000065	head-tail adaptor	connector
eggNOG-mapper	UHGV-0015925_17	1120998.AUFC01000030_gene2237	50.8	0.00000154	N/A	N/A
PHROG	UHGV-0015925_18	phrog_422	239.8	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0015925_18	693746.OBV_18090	402.0	0	N/A	N/A
structural_annotation	UHGV-0015925_18	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_19	phrog_194	80.7	2.2e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0015925_19	UniRef90_UPI000B35FF41	191.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0015925_19	663278.Ethha_0497	137.0	2.47e-38	N/A	N/A
Pfam	UHGV-0015925_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0015925_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_21	phrog_581	327.0	0	minor head protein	head and packaging
UniRef90	UHGV-0015925_21	UniRef90_A0A1Y4H5E2	437.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0015925_21	748224.HMPREF9436_03339	432.0	0	N/A	N/A
Pfam	UHGV-0015925_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0015925_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015925_21	PF06152,PF12636	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_22	phrog_533	306.8	0	portal protein	head and packaging
UniRef90	UHGV-0015925_22	UniRef90_A0A173Y8E3	375.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0015925_22	641112.ACOK01000073_gene2889	210.0	0	N/A	N/A
structural_annotation	UHGV-0015925_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0015925_23	K06909	388.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0015925_23	phrog_3717	142.1	3.09967e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0015925_23	UniRef90_R5AG08	613.0	0	Phage terminase	N/A
eggNOG-mapper	UHGV-0015925_23	411471.SUBVAR_06507	513.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0015925_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0015925_23	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0015925_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0015925_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0015925_23	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_24	phrog_309	183.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-0015925_24	UniRef90_UPI001D01EB7C	203.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0015925_24	693746.OBV_18020	176.0	0	transposase activity	N/A
Pfam	UHGV-0015925_24	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0015925_24	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0015925_24	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_25	phrog_36	59.4	6.9e-17	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0015925_25	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_26	phrog_6568	67.0	2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0015925_26	742740.HMPREF9474_02283	48.9	0.000000591	N/A	N/A
PHROG	UHGV-0015925_30	phrog_2118	107.2	1.7e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015925_30	UniRef90_A0A417HX51	187.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0015925_30	742740.HMPREF9474_03129	121.0	8.83e-34	HNH endonuclease	N/A
Pfam	UHGV-0015925_30	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0015925_30	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0015925_30	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_32	phrog_757	145.7	2.10195e-43	DNA methyltransferase	other
UniRef90	UHGV-0015925_32	UniRef90_A0A355KVL2	268.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0015925_32	748224.HMPREF9436_03069	258.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0015925_32	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0015925_33	phrog_757	44.7	0.0000000000017	DNA methyltransferase	other
UniRef90	UHGV-0015925_33	UniRef90_A0A661CSC3	61.2	0.0000000000268	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0015925_33	748224.HMPREF9436_03069	94.7	1.93e-23	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0015925_33	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0015925_34	phrog_1384	121.6	5.5e-36	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0015925_34	665956.HMPREF1032_03086	284.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0015925_34	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
Pfam	UHGV-0015925_35	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0015925_35	NF037951	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_37	phrog_678	60.2	4.9e-17	replication initiation O-like	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0015925_37	1035196.HMPREF9998_01752	55.1	0.00000423	N/A	N/A
COG	UHGV-0015925_37	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-0015925_38	K03111	138.3	7.80005e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0015925_38	phrog_44	141.7	4.19969e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015925_38	UniRef90_A0A3D1LE19	200.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0015925_38	693746.OBV_19910	190.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0015925_38	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0015925_38	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0015925_38	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0015925_38	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0015925_38	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015925_39	UniRef90_UPI001F4CC127	61.2	0.0000000000353	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0015925_39	682795.AciX8_3287	46.2	0.00000819	Helix-turn-helix domain	N/A
Pfam	UHGV-0015925_39	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0015925_39	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0015925_39	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015925_40	PF20794	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_41	phrog_2600	108.4	8.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-0015925_41	1415774.U728_3767	136.0	9.15e-37	N/A	N/A
PHROG	UHGV-0015925_42	phrog_7370	54.4	0.0000000000000019	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015925_42	UniRef90_A0A3D1LDS4	140.0	2.42999e-41	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0015925_42	1048339.KB913029_gene4935	57.4	0.000000009	PFAM HNH endonuclease	N/A
Pfam	UHGV-0015925_42	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0015925_42	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0015925_43	phrog_72	49.2	0.000000000000018	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015925_43	UniRef90_UPI000C7BF263	118.0	1.73e-30	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0015925_43	445972.ANACOL_01825	132.0	9.72e-37	N/A	N/A
structural_annotation	UHGV-0015925_43	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0015925_44	phrog_155	144.2	7.80523e-43	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015925_44	UniRef90_UPI001439856C	193.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0015925_44	97138.C820_00777	183.0	0	ERF superfamily	N/A
Pfam	UHGV-0015925_44	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0015925_44	PF04404,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015925_46	PF00412	N/A	N/A	N/A	N/A
Pfam	UHGV-0015925_47	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0015925_51	phrog_5765	44.6	0.0000000000015	N/A	unknown function
UniRef90	UHGV-0015925_51	UniRef90_A0A6L8XUI5	53.5	0.0000000295	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0015925_51	926692.AZYG01000059_gene90	46.6	0.00000324	N/A	N/A
NCBIFam	UHGV-0015925_51	NF033495.1	N/A	N/A	BC1881 family protein	N/A