Viral Genome: UHGV-0016178


Overview
UHGV ID UHGV-0016178
vOTU ID vOTU-042834
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_MoBio_hadza-A-D_E_6_1152__NODE_1253_length_62532_cov_10.120263
Associated BioSample SAMEA4765612
Viral genome confidence Confident

Quality assessment
CheckV method DTR
CheckV completeness 100 (Complete)
Trimmed provirus No
CheckV viral markers 27
CheckV host markers 1
Recoded stop codon No
Viral Content
geNomad score 0.9769
Virus hallmark genes (geNomad) 9
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 74.07
Jumbo phage No

Genome content
Genome length (bp) 62,455
GC content 44.58%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 88
CDS density 94%
Average CDS length (bps) 663.68
Total tRNA genes 0
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 100)
x
This website uses cookies to improve user experience. By using this service you consent to all cookies in accordance with our privacy policy. OK