UHGV-0016657 (vOTU-022548)

Viral Genome: UHGV-0016657

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0016657
vOTU ID	vOTU-022548
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_A_6_1816__NODE_2178_length_24841_cov_42.155993
Associated BioSample	SAMEA4766053
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	59.12 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9833
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.22
Jumbo phage	No

Genome content
Genome length (bp)	24,841
GC content	53.91%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	45
CDS density	96%
Average CDS length (bps)	528.27
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.12)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0016657_2	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0016657_2	PF21722	N/A	N/A	N/A	N/A
Pfam	UHGV-0016657_3	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0016657_3	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_5	phrog_18725	70.8	6.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0016657_5	1235797.C816_02657	77.8	0.0000000000000685	N/A	N/A
COG	UHGV-0016657_5	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0016657_5	PF13754,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-0016657_6	K01361	62.0	3.8e-18	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-0016657_6	phrog_11157	232.6	0	N/A	unknown function
UniRef90	UHGV-0016657_6	UniRef90_UPI001C10C6DC	393.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0016657_6	476272.RUMHYD_02867	293.0	0	N/A	N/A
Pfam	UHGV-0016657_6	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0016657_6	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0016657_6	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0016657_6	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_8	phrog_13879	250.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0016657_8	1226322.HMPREF1545_00061	492.0	0	N/A	N/A
structural_annotation	UHGV-0016657_8	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_9	phrog_1194	60.3	2.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-0016657_9	1226322.HMPREF1545_00060	238.0	0	N/A	N/A
structural_annotation	UHGV-0016657_9	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0016657_10	K03529	41.6	0.000000000005	smc; chromosome segregation protein	N/A
PHROG	UHGV-0016657_10	phrog_1535	127.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0016657_10	UniRef90_A0A810PX76	307.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0016657_10	1235797.C816_04182	271.0	0	SLT domain	N/A
COG	UHGV-0016657_10	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016657_10	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_11	phrog_806	85.0	8.3e-25	N/A	unknown function
UniRef90	UHGV-0016657_11	UniRef90_A0A212ITM5	218.0	0	Telomeric repeat-binding factor 2	N/A
eggNOG-mapper	UHGV-0016657_11	476272.RUMHYD_01730	162.0	0	N/A	N/A
Pfam	UHGV-0016657_11	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0016657_11	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0016657_11	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_12	phrog_706	118.5	5e-35	N/A	unknown function
UniRef90	UHGV-0016657_12	UniRef90_UPI000682A80B	221.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0016657_12	693746.OBV_18170	217.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0016657_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0016657_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_13	phrog_11299	73.5	3.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0016657_13	693746.OBV_18160	143.0	3.09967e-42	N/A	N/A
structural_annotation	UHGV-0016657_13	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_14	phrog_3099	90.7	1.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0016657_14	1226322.HMPREF1545_00056	244.0	0	N/A	N/A
structural_annotation	UHGV-0016657_14	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_15	phrog_3266	62.3	6.9e-18	tail completion	connector
UniRef90	UHGV-0016657_15	UniRef90_A0A2Z4QA01	122.0	2.49e-33	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0016657_15	1232443.BAIA02000078_gene24	184.0	0	N/A	N/A
structural_annotation	UHGV-0016657_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_16	phrog_556	81.7	6.8e-24	minor head protein	head and packaging
UniRef90	UHGV-0016657_16	UniRef90_UPI00195E1497	187.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0016657_16	1226322.HMPREF1545_00054	157.0	0	Minor capsid protein	N/A
Pfam	UHGV-0016657_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0016657_16	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_17	phrog_3366	92.3	4.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0016657_17	1226322.HMPREF1545_00053	150.0	9.80909e-45	N/A	N/A
structural_annotation	UHGV-0016657_17	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_18	phrog_541	106.9	1.1e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0016657_18	642492.Clole_0822	67.4	0.000000000002	N/A	N/A
PHROG	UHGV-0016657_19	phrog_544	190.5	0	major head protein	head and packaging
UniRef90	UHGV-0016657_19	UniRef90_A0A810PZM2	499.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0016657_19	1347392.CCEZ01000005_gene1236	291.0	0	N/A	N/A
structural_annotation	UHGV-0016657_19	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016657_20	UniRef90_A0A6B9SU02	86.3	1.69e-17	Fibronectin autolysin	N/A
structural_annotation	UHGV-0016657_20	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016657_21	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_23	phrog_581	283.6	0	minor head protein	head and packaging
UniRef90	UHGV-0016657_23	UniRef90_UPI001D080D49	553.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0016657_23	1226322.HMPREF1545_00046	370.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0016657_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0016657_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016657_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0016657_25	phrog_533	389.9	0	portal protein	head and packaging
UniRef90	UHGV-0016657_25	UniRef90_A0A1C5N775	584.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0016657_25	1226322.HMPREF1545_00044	552.0	0	N/A	N/A
Pfam	UHGV-0016657_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0016657_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0016657_26	K06909	113.8	1.8e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0016657_26	phrog_2	115.9	5.4e-34	terminase large subunit	head and packaging
UniRef90	UHGV-0016657_26	UniRef90_A0A3D3Y0N9	414.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0016657_26	1226322.HMPREF1545_00043	394.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0016657_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0016657_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0016657_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0016657_26	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016657_27	UniRef90_UPI0009523D83	167.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0016657_27	1226322.HMPREF1545_00042	162.0	0	N/A	N/A
structural_annotation	UHGV-0016657_27	PF13542	N/A	N/A	N/A	N/A
Pfam	UHGV-0016657_28	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0016657_29	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016657_32	UniRef90_A0A8D9PDT5	74.7	0.0000000000000035	Hydrogenase/urease nickel incorporation protein	N/A
KOfam	UHGV-0016657_37	K05925	56.3	3.4e-16	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-0016657_37	phrog_359	209.0	0	DNA methyltransferase	other
UniRef90	UHGV-0016657_37	UniRef90_A0A3D1PJR7	285.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0016657_37	400682.PAC_15710341	204.0	0	primary miRNA methylation	N/A
PADLOC	UHGV-0016657_37	MTase_II_00048	208.4	0	Type II methyltransferase	RM
Pfam	UHGV-0016657_37	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0016657_37	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-0016657_37	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016657_38	UniRef90_A0A8D9PDK1	75.1	9.92e-16	Anti-repressor	N/A
KOfam	UHGV-0016657_41	K00390	54.4	1.5e-16	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0016657_41	phrog_424	125.7	3.3e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0016657_41	UniRef90_A0A1H7KWC5	327.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-0016657_41	1280696.ATVY01000096_gene1971	278.0	0	N/A	N/A
Pfam	UHGV-0016657_41	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0016657_41	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0016657_41	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016657_42	UniRef90_A0A844U3V8	56.6	0.00000313	Leucine-rich repeat protein	N/A
UniRef90	UHGV-0016657_43	UniRef90_A0A098GES5	99.8	2.57e-25	Putative phage associated protein	N/A
structural_annotation	UHGV-0016657_43	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016657_44	PF19885	N/A	N/A	N/A	N/A
Pfam	UHGV-0016657_45	PF06356	N/A	N/A	N/A	DUF1064