Viral Genome: UHGV-0016790


Genome Information

Overview
UHGV ID UHGV-0016790
vOTU ID vOTU-042917
Representative Genome? No
Source Hadza
Original genome ID Hadza_MoBio_hadza-E-H_A_18_1822__NODE_190_length_137981_cov_8.018759
Associated BioSample SAMEA4766059
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 70.12 (Medium-quality)
Trimmed provirus No
CheckV viral markers 24
CheckV host markers 3
Recoded stop codon No
Viral Content
geNomad score 0.9758
Virus hallmark genes (geNomad) 1
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 11.27
Jumbo phage No

Genome content
Genome length (bp) 137,981
GC content 33.56%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 158
CDS density 84%
Average CDS length (bps) 730.44
Total tRNA genes 31
Suppressor tRNA genes 0
x
This website uses cookies to improve user experience. By using this service you consent to all cookies in accordance with our privacy policy. OK