Overview | |
---|---|
UHGV ID | UHGV-0016790 |
vOTU ID | vOTU-042917 |
Representative Genome? | No |
Source | Hadza |
Original genome ID | Hadza_MoBio_hadza-E-H_A_18_1822__NODE_190_length_137981_cov_8.018759 |
Associated BioSample | SAMEA4766059 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 70.12 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 24 |
CheckV host markers | 3 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9758 |
Virus hallmark genes (geNomad) | 1 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 11.27 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 137,981 |
GC content | 33.56% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 158 |
CDS density | 84% |
Average CDS length (bps) | 730.44 |
Total tRNA genes | 31 |
Suppressor tRNA genes | 0 |