UHGV-0017449 (vOTU-115807)

Viral Genome: UHGV-0017449

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0017449
vOTU ID	vOTU-115807
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_H_24_1651__NODE_2595_length_30413_cov_4.780030
Associated BioSample	SAMEA4765932
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	62.3 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9833
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.4
Jumbo phage	No

Genome content
Genome length (bp)	30,413
GC content	55.39%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	94%
Average CDS length (bps)	570.06
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0017449_1	phrog_21718	106.3	2.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0017449_1	397290.C810_05210	79.3	1.33e-16	N/A	N/A
PHROG	UHGV-0017449_2	phrog_3754	113.8	1.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0017449_2	1226322.HMPREF1545_00073	171.0	0	N/A	N/A
KOfam	UHGV-0017449_4	K01447	80.6	2.5e-23	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0017449_4	phrog_1794	153.6	1.4013e-45	amidase	lysis
UniRef90	UHGV-0017449_4	UniRef90_A0A658JW32	258.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0017449_4	573061.Clocel_3960	249.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0017449_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0017449_4	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0017449_4	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0017449_4	PF01510,PF01471,TIGR03979,COG5632,COG3409	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017449_5	PF09682	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0017449_6	1203606.HMPREF1526_00254	80.5	2.5e-18	N/A	N/A
structural_annotation	UHGV-0017449_7	PF05543,NF033920	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017449_8	UniRef90_A0A1Q6JHV6	132.0	2.79e-38	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0017449_8	1235835.C814_01206	122.0	2.93e-35	N/A	N/A
PHROG	UHGV-0017449_9	phrog_18593	106.2	2.8e-31	N/A	unknown function
UniRef90	UHGV-0017449_9	UniRef90_R6RWR8	145.0	3.11004e-41	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0017449_9	411460.RUMTOR_02099	115.0	5.35e-30	N/A	N/A
Pfam	UHGV-0017449_9	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0017449_9	PF14600	N/A	N/A	N/A	N/A
Pfam	UHGV-0017449_11	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0017449_11	PF21722	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0017449_12	1235797.C816_04177	68.9	0.000000000858	alginic acid biosynthetic process	N/A
COG	UHGV-0017449_12	COG1511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017449_15	UniRef90_A0A2Z4QA20	73.6	0.00000000000331	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0017449_15	1235797.C816_04179	84.0	0.00000000000000127	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0017449_15	COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_16	phrog_6616	44.1	0.0000000000013	tail protein	tail
UniRef90	UHGV-0017449_16	UniRef90_A0A2Z4QA17	100.0	4.02e-22	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0017449_16	1232443.BAIA02000078_gene16	83.6	1.23e-16	N/A	N/A
structural_annotation	UHGV-0017449_16	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_17	phrog_1194	62.1	8.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0017449_17	1232443.BAIA02000078_gene17	67.8	0.000000000000694	N/A	N/A
Pfam	UHGV-0017449_17	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0017449_17	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_18	phrog_1535	119.3	1.49939e-42	tail length tape measure protein	tail
UniRef90	UHGV-0017449_18	UniRef90_A0A810PX76	171.0	1.57996e-41	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0017449_18	1235797.C816_04182	168.0	6.04997e-41	SLT domain	N/A
COG	UHGV-0017449_18	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017449_18	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_19	phrog_13333	43.7	0.0000000000033	N/A	unknown function
eggNOG-mapper	UHGV-0017449_19	1203606.HMPREF1526_01637	56.6	0.000000357	tRNA_anti-like	N/A
Pfam	UHGV-0017449_19	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
PHROG	UHGV-0017449_20	phrog_706	129.9	1.6e-38	N/A	unknown function
UniRef90	UHGV-0017449_20	UniRef90_UPI000682A80B	231.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0017449_20	693746.OBV_18170	215.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0017449_20	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0017449_20	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_21	phrog_11299	76.5	3.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-0017449_21	693746.OBV_18160	184.0	0	N/A	N/A
structural_annotation	UHGV-0017449_21	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_22	phrog_3099	93.5	2.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0017449_22	693746.OBV_18150	230.0	0	N/A	N/A
structural_annotation	UHGV-0017449_22	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_23	phrog_3266	52.7	0.0000000000000061	tail completion	connector
eggNOG-mapper	UHGV-0017449_23	1232443.BAIA02000078_gene24	190.0	0	N/A	N/A
structural_annotation	UHGV-0017449_23	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_24	phrog_556	61.8	4.9e-18	minor head protein	head and packaging
UniRef90	UHGV-0017449_24	UniRef90_UPI00195E1497	178.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0017449_24	1226322.HMPREF1545_00054	149.0	1.12104e-44	Minor capsid protein	N/A
Pfam	UHGV-0017449_24	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0017449_24	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_25	phrog_3366	84.3	1.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0017449_25	1226322.HMPREF1545_00053	149.0	2.66247e-44	N/A	N/A
structural_annotation	UHGV-0017449_25	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_26	phrog_541	97.4	1.1e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0017449_26	642492.Clole_0822	69.3	0.000000000000294	N/A	N/A
PHROG	UHGV-0017449_27	phrog_29	177.4	0	major head protein	head and packaging
UniRef90	UHGV-0017449_27	UniRef90_UPI0004AE1FFD	426.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0017449_27	1232443.BAIA02000078_gene29	426.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0017449_27	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0017449_27	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_28	phrog_909	55.7	7.1e-16	major head protein	head and packaging
UniRef90	UHGV-0017449_28	UniRef90_K1TUL5	79.3	7.53e-16	N/A	N/A
eggNOG-mapper	UHGV-0017449_28	1536772.R70723_06665	59.7	0.00000000309	N/A	N/A
structural_annotation	UHGV-0017449_28	PF02924	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017449_29	UniRef90_UPI00189CE417	123.0	5e-32	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0017449_29	1232443.BAIA02000078_gene31	127.0	1.51e-34	N/A	N/A
structural_annotation	UHGV-0017449_29	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017449_30	PF19593	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_31	phrog_581	304.5	0	minor head protein	head and packaging
UniRef90	UHGV-0017449_31	UniRef90_U2SBR7	458.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0017449_31	1226322.HMPREF1545_00046	458.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0017449_31	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0017449_31	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017449_31	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_32	phrog_533	308.8	0	portal protein	head and packaging
UniRef90	UHGV-0017449_32	UniRef90_UPI00189D71DB	555.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0017449_32	1232443.BAIA02000078_gene36	536.0	0	N/A	N/A
structural_annotation	UHGV-0017449_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0017449_33	K06909	116.1	3.9e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0017449_33	phrog_10250	171.8	0	N/A	unknown function
UniRef90	UHGV-0017449_33	UniRef90_UPI000462EB3C	653.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0017449_33	1226322.HMPREF1545_00043	560.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0017449_33	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0017449_33	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0017449_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0017449_33	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017449_34	UniRef90_A0A8D9PDT2	164.0	0	Brinker DNA-binding domain protein	N/A
eggNOG-mapper	UHGV-0017449_34	1226322.HMPREF1545_00042	162.0	0	N/A	N/A
structural_annotation	UHGV-0017449_34	PF13542	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_38	phrog_18750	41.5	0.000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0017449_38	411483.FAEPRAA2165_01872	53.5	0.000006	Cell wall hydrolase	N/A
COG	UHGV-0017449_38	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0017449_38	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_40	phrog_419	105.0	8.1e-31	N/A	unknown function
UniRef90	UHGV-0017449_40	UniRef90_A0A0I7PZA1	96.7	1.48e-24	N/A	N/A
eggNOG-mapper	UHGV-0017449_40	536233.CLO_0538	98.2	5.94e-26	N/A	N/A
structural_annotation	UHGV-0017449_40	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_41	phrog_2118	103.6	2.2e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017449_41	UniRef90_A0A417HX51	196.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0017449_41	742740.HMPREF9474_03129	126.0	6.43e-36	HNH endonuclease	N/A
Pfam	UHGV-0017449_41	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0017449_41	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0017449_41	TIGR02646,COG1403	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0017449_43	1232443.BAIA02000078_gene48	50.8	0.00000329	N/A	N/A
PHROG	UHGV-0017449_44	phrog_1384	125.3	4.5e-37	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0017449_44	665956.HMPREF1032_03086	272.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0017449_44	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_45	phrog_2245	97.3	1.2e-28	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0017449_45	UniRef90_A0A4U9RLZ8	77.0	0.0000000000000016	N/A	N/A
eggNOG-mapper	UHGV-0017449_45	293826.Amet_2596	85.5	8.15e-19	N/A	N/A
structural_annotation	UHGV-0017449_45	NF001611,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0017449_46	phrog_9298	327.3	0	radical SAM domain protein	other
UniRef90	UHGV-0017449_46	UniRef90_UPI001C3BADA7	456.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-0017449_46	1235797.C816_00412	454.0	0	N/A	N/A
COG	UHGV-0017449_46	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0017449_46	MF_01865,NF010916,COG0621	N/A	N/A	N/A	N/A
KOfam	UHGV-0017449_47	K00558	43.7	1.4e-16	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0017449_47	phrog_16427	86.1	6.5e-26	DNA methyltransferase	other
UniRef90	UHGV-0017449_47	UniRef90_A0A2V2GPQ5	258.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0017449_47	657322.FPR_26610	202.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
PADLOC	UHGV-0017449_47	oMTase_00004	65.5	6e-35	orphan methyltransferase	RM
Pfam	UHGV-0017449_47	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0017449_47	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0017449_48	K00558	108.5	5e-32	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0017449_48	phrog_116	121.4	5.2e-36	DNA methyltransferase	other
UniRef90	UHGV-0017449_48	UniRef90_K1R461	319.0	0	DNA-cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0017449_48	755731.Clo1100_3519	211.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0017449_48	oMTase_00004	193.8	0	orphan methyltransferase	RM
Pfam	UHGV-0017449_48	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0017449_48	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0017449_50	K00571	94.6	1.4e-27	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0017449_50	phrog_67	88.7	9.2e-27	DNA methyltransferase	other
UniRef90	UHGV-0017449_50	UniRef90_A0A1C6E5W1	323.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0017449_50	749222.Nitsa_1817	299.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0017449_50	MTase_II_00157	71.5	6.5e-21	Type II methyltransferase	RM
Pfam	UHGV-0017449_50	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0017449_50	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0017449_50	PF01555,MF_00786,NF010253,COG0863	N/A	N/A	N/A	N/A