UHGV-0017451 (vOTU-119755)

Viral Genome: UHGV-0017451

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0017451
vOTU ID	vOTU-119755
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_A_18_1822__NODE_2271_length_35083_cov_19.588613
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.65 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	5
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	10.37
Jumbo phage	No

Genome content
Genome length (bp)	35,083
GC content	54.59%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	44
CDS density	94%
Average CDS length (bps)	749.46
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.65)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0017451_5	K06909	135.2	5.6e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0017451_5	phrog_979	129.9	2.69999e-40	terminase large subunit	head and packaging
UniRef90	UHGV-0017451_5	UniRef90_A0A3D5TIM8	629.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0017451_5	1410650.JHWL01000003_gene2834	604.0	0	N/A	N/A
Pfam	UHGV-0017451_5	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0017451_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0017451_5	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0017451_6	phrog_156	329.1	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0017451_6	1410650.JHWL01000003_gene2833	570.0	0	N/A	N/A
structural_annotation	UHGV-0017451_6	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0017451_7	K07584	44.7	0.0000000000023	N/A	N/A
PHROG	UHGV-0017451_7	phrog_4478	53.5	0.0000000000000028	peptidase	other
eggNOG-mapper	UHGV-0017451_7	1231377.C426_1790	55.1	0.000000046	Pfam:Peptidase_C108	N/A
Pfam	UHGV-0017451_7	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0017451_7	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017451_7	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0017451_8	phrog_13908	217.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0017451_8	1410650.JHWL01000003_gene2831	109.0	3.09e-25	N/A	N/A
PHROG	UHGV-0017451_9	phrog_1357	277.0	0	major head protein	head and packaging
UniRef90	UHGV-0017451_9	UniRef90_A0A2V2GQW4	377.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0017451_9	748224.HMPREF9436_01399	345.0	0	N/A	N/A
Pfam	UHGV-0017451_9	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0017451_9	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0017451_9	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0017451_10	phrog_15239	51.3	0.000000000000017	N/A	unknown function
PHROG	UHGV-0017451_11	phrog_12105	127.7	4.8e-38	N/A	unknown function
eggNOG-mapper	UHGV-0017451_11	1226322.HMPREF1545_03850	65.1	0.00000000000846	N/A	N/A
PHROG	UHGV-0017451_12	phrog_511	196.9	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0017451_12	1519439.JPJG01000060_gene1903	312.0	0	N/A	N/A
structural_annotation	UHGV-0017451_12	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0017451_15	phrog_15594	42.5	0.000000000011	N/A	unknown function
structural_annotation	UHGV-0017451_15	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0017451_17	phrog_24103	74.3	2.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0017451_17	665956.HMPREF1032_02937	75.1	0.000000000000673	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0017451_17	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0017451_19	PF03425,NF038128,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0017451_21	phrog_2310	51.8	0.0000000000000064	N/A	unknown function
eggNOG-mapper	UHGV-0017451_21	1151292.QEW_0364	46.6	0.00000441	N/A	N/A
UniRef90	UHGV-0017451_22	UniRef90_R5DCX9	137.0	3.17e-34	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0017451_22	1410650.JHWL01000003_gene2815	114.0	5.77e-26	N/A	N/A
PHROG	UHGV-0017451_23	phrog_22978	758.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0017451_23	1226322.HMPREF1545_00787	103.0	9.87e-19	N/A	N/A
Pfam	UHGV-0017451_23	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
KOfam	UHGV-0017451_24	K08640	83.3	1.6e-24	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0017451_24	phrog_2649	59.5	5e-18	endolysin	lysis
UniRef90	UHGV-0017451_24	UniRef90_UPI001C12323B	234.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0017451_24	680198.SCAB_6441	73.6	0.000000000000367	Zinc D-Ala-D-Ala carboxypeptidase	N/A
Pfam	UHGV-0017451_24	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0017451_24	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0017451_24	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017451_24	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0017451_25	phrog_1863	59.7	2.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0017451_25	748224.HMPREF9436_00408	85.1	7.97e-21	N/A	N/A
PHROG	UHGV-0017451_26	phrog_1129	83.5	1.4e-24	holin	lysis
UniRef90	UHGV-0017451_26	UniRef90_A0A316A1J8	105.0	6.67e-28	Holin family Hol44 protein (Superfamily V)	N/A
eggNOG-mapper	UHGV-0017451_26	1256908.HMPREF0373_00463	96.7	3.46e-25	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0017451_26	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0017451_26	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017451_27	PF07638,MF_00674,TIGR02954,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0017451_28	phrog_3754	95.3	5.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0017451_28	476272.RUMHYD_01764	150.0	2.8026e-45	N/A	N/A
PHROG	UHGV-0017451_29	phrog_21718	78.6	7.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0017451_29	476272.RUMHYD_01768	80.9	7.53e-18	N/A	N/A
PHROG	UHGV-0017451_30	phrog_22984	64.7	1.4e-18	N/A	unknown function
PHROG	UHGV-0017451_31	phrog_16490	111.1	1.1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0017451_31	1408437.JNJN01000043_gene803	92.4	8.97e-20	N/A	N/A
PHROG	UHGV-0017451_32	phrog_20016	163.8	0	N/A	unknown function
UniRef90	UHGV-0017451_32	UniRef90_A0A345BPX4	145.0	3.0198e-42	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0017451_32	1226322.HMPREF1545_00077	137.0	1.67e-39	N/A	N/A
structural_annotation	UHGV-0017451_32	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0017451_33	1235790.C805_00063	50.8	0.00000549	N/A	N/A
structural_annotation	UHGV-0017451_33	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0017451_34	K14059	144.2	1.49939e-42	int; integrase	N/A
PHROG	UHGV-0017451_34	phrog_1	152.8	2.8026e-45	integrase	integration and excision
UniRef90	UHGV-0017451_34	UniRef90_A0A3D3Y0G6	316.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0017451_34	693746.OBV_41260	239.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0017451_34	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0017451_34	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0017451_34	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
Pfam	UHGV-0017451_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0017451_37	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0017451_39	K22300	60.9	3e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0017451_39	phrog_2967	58.4	1.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0017451_39	UniRef90_A0A1Y4H5B2	103.0	3.41e-26	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0017451_39	755731.Clo1100_1415	77.4	1.31e-16	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0017451_39	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0017451_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0017451_39	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A