UHGV-0017739 (vOTU-110013)

Viral Genome: UHGV-0017739

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0017739
vOTU ID	vOTU-110013
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_H_2_1640__NODE_5723_length_20967_cov_9.100766
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.04 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.98
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.76
Jumbo phage	No

Genome content
Genome length (bp)	20,967
GC content	51.72%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	95%
Average CDS length (bps)	662.40
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0017739_2	K00571	102.3	6e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0017739_2	phrog_67	94.4	2.3e-28	DNA methyltransferase	other
UniRef90	UHGV-0017739_2	UniRef90_A0A1C6E5W1	487.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0017739_2	910314.HMPREF9220_0636	373.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0017739_2	MTase_II_00157	79.1	8.2e-24	Type II methyltransferase	RM
Pfam	UHGV-0017739_2	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0017739_2	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0017739_2	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
Pfam	UHGV-0017739_3	PF04297	N/A	N/A	Putative helix-turn-helix protein, YlxM / p13 like	UPF0122
COG	UHGV-0017739_3	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
KOfam	UHGV-0017739_5	K07317	46.7	0.00000000000032	K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0017739_5	phrog_21201	70.2	2.3e-20	DNA methyltransferase	other
UniRef90	UHGV-0017739_5	UniRef90_UPI001C033A7E	112.0	5.42e-29	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0017739_5	264199.stu1376	78.2	9.79e-16	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
COG	UHGV-0017739_5	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0017739_5	PF20473,NF041658	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017739_6	UniRef90_UPI0018AC41F1	153.0	1.4013e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0017739_6	1226322.HMPREF1545_00042	126.0	1.6e-35	N/A	N/A
structural_annotation	UHGV-0017739_6	PF04218,COG3677	N/A	N/A	N/A	N/A
KOfam	UHGV-0017739_7	K06909	393.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0017739_7	phrog_3717	158.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0017739_7	UniRef90_A0A2U1BEH4	742.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0017739_7	33035.JPJF01000106_gene3136	477.0	0	Terminase small subunit	N/A
Pfam	UHGV-0017739_7	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0017739_7	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0017739_7	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0017739_7	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0017739_7	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_8	phrog_533	363.5	0	portal protein	head and packaging
UniRef90	UHGV-0017739_8	UniRef90_A0A2U1BEK0	639.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-0017739_8	1226322.HMPREF1545_00044	622.0	0	N/A	N/A
Pfam	UHGV-0017739_8	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0017739_8	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_9	phrog_581	299.6	0	minor head protein	head and packaging
UniRef90	UHGV-0017739_9	UniRef90_A0A1C5N7V1	562.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0017739_9	1226322.HMPREF1545_00046	396.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0017739_9	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0017739_9	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0017739_9	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017739_9	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_10	phrog_194	87.8	1.5e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0017739_10	UniRef90_A0A2Z4Q9Y8	129.0	4.15e-34	Minor structural protein	N/A
eggNOG-mapper	UHGV-0017739_10	1232443.BAIA02000078_gene31	95.9	2.19e-22	N/A	N/A
Pfam	UHGV-0017739_10	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0017739_10	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_11	phrog_212	253.1	0	major head protein	head and packaging
UniRef90	UHGV-0017739_11	UniRef90_A0A354MR33	521.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0017739_11	935836.JAEL01000021_gene1494	340.0	0	N/A	N/A
structural_annotation	UHGV-0017739_11	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_12	phrog_541	101.3	6.1e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-0017739_12	642492.Clole_0822	70.1	0.000000000000171	N/A	N/A
PHROG	UHGV-0017739_13	phrog_3366	83.0	3.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0017739_13	1226322.HMPREF1545_00053	152.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0017739_13	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_14	phrog_556	76.8	2.1e-22	minor head protein	head and packaging
UniRef90	UHGV-0017739_14	UniRef90_UPI00195E1497	163.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0017739_14	1226322.HMPREF1545_00054	125.0	2.67e-35	Minor capsid protein	N/A
Pfam	UHGV-0017739_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0017739_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_15	phrog_3266	53.3	0.0000000000000036	tail completion	connector
eggNOG-mapper	UHGV-0017739_15	1232443.BAIA02000078_gene24	139.0	4.33e-40	N/A	N/A
structural_annotation	UHGV-0017739_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_16	phrog_3099	93.5	2.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0017739_16	1226322.HMPREF1545_00056	255.0	0	N/A	N/A
structural_annotation	UHGV-0017739_16	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_17	phrog_11299	76.5	3.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0017739_17	1235797.C816_04185	113.0	2.55e-30	N/A	N/A
structural_annotation	UHGV-0017739_17	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_18	phrog_706	117.0	1.4e-34	N/A	unknown function
UniRef90	UHGV-0017739_18	UniRef90_UPI000682A80B	241.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0017739_18	693746.OBV_18170	223.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0017739_18	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0017739_18	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0017739_19	K07448	114.0	1.3e-33	mrr; restriction system protein	N/A
PHROG	UHGV-0017739_19	phrog_19856	52.5	0.0000000000000055	N/A	unknown function
UniRef90	UHGV-0017739_19	UniRef90_A0A2Z4Q9W7	240.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-0017739_19	397290.C810_01426	167.0	0	Restriction endonuclease	N/A
PADLOC	UHGV-0017739_19	ZorD1_00005	70.0	2.5e-20	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0017739_19	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
Pfam	UHGV-0017739_19	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0017739_19	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-0017739_19	PF04471,NF002876,COG1787	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_20	phrog_1535	91.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0017739_20	UniRef90_A0A810PX76	137.0	4.17e-30	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0017739_20	1235797.C816_04182	238.0	0	SLT domain	N/A
COG	UHGV-0017739_20	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017739_20	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_21	phrog_1194	64.4	1.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0017739_21	1226322.HMPREF1545_00060	235.0	0	N/A	N/A
structural_annotation	UHGV-0017739_21	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_22	phrog_13879	259.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0017739_22	693746.OBV_18210	538.0	0	N/A	N/A
structural_annotation	UHGV-0017739_22	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_23	phrog_18725	64.9	8.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0017739_23	1226322.HMPREF1545_00062	106.0	1.79e-27	N/A	N/A
UniRef90	UHGV-0017739_24	UniRef90_A0A096B066	142.0	3.34e-35	Mtd_N domain-containing protein	N/A
COG	UHGV-0017739_24	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0017739_27	phrog_4105	44.7	0.0000000000021	N/A	unknown function
UniRef90	UHGV-0017739_28	UniRef90_A0A1T5AMW7	99.4	2.12e-22	NAGPA domain-containing protein	N/A
structural_annotation	UHGV-0017739_28	PF09992,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0017739_29	phrog_13256	81.0	7.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0017739_29	1226322.HMPREF1545_02800	69.7	0.00000000000000294	N/A	N/A
eggNOG-mapper	UHGV-0017739_30	665950.HMPREF1025_01328	54.3	0.0000000352	CHAP domain	N/A
COG	UHGV-0017739_30	COG1388	N/A	N/A	LysM repeat	N/A