UHGV-0017922 (vOTU-087622)

Viral Genome: UHGV-0017922

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0017922
vOTU ID	vOTU-087622
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_E_13_1725__NODE_802_length_36727_cov_6.128131
Associated BioSample	SAMEA4766005
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	81.7 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9769
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.78
Jumbo phage	No

Genome content
Genome length (bp)	36,727
GC content	33.59%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	62
CDS density	90%
Average CDS length (bps)	533.23
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 81.7)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0017922_1	K01447	60.5	3.3e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0017922_1	phrog_7698	153.9	1.4013e-45	endolysin	lysis
UniRef90	UHGV-0017922_1	UniRef90_UPI001D0AA402	545.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0017922_1	1125712.HMPREF1316_2631	145.0	2.41e-40	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0017922_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0017922_1	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0017922_1	COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_3	phrog_443	52.1	0.000000000000017	holin	lysis
UniRef90	UHGV-0017922_3	UniRef90_A0A2U2ELA1	78.2	1.3e-17	Membrane protein	N/A
eggNOG-mapper	UHGV-0017922_3	476272.RUMHYD_01759	84.3	1.09e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0017922_3	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0017922_3	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_5	phrog_20016	60.5	2e-17	N/A	unknown function
UniRef90	UHGV-0017922_5	UniRef90_A0A395WF88	256.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0017922_5	1226322.HMPREF1545_00077	58.9	0.00000000446	N/A	N/A
Pfam	UHGV-0017922_5	PF18573	N/A	N/A	BclA C-terminal domain	BclA_C
structural_annotation	UHGV-0017922_5	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017922_6	UniRef90_A0A8F0WFQ8	69.7	0.000000000103	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0017922_6	476272.RUMHYD_01770	114.0	1.27e-28	N/A	N/A
PHROG	UHGV-0017922_14	phrog_19280	81.7	6.2e-24	N/A	unknown function
UniRef90	UHGV-0017922_14	UniRef90_A0A413UF00	611.0	0	N/A	N/A
eggNOG-mapper	UHGV-0017922_14	1160721.RBI_I01569	108.0	5.75e-23	N/A	N/A
Pfam	UHGV-0017922_14	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0017922_14	PF19789	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017922_16	PF16407,TIGR02657,COG3794	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017922_17	PF05895,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017922_18	PF10651,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_19	phrog_1067	46.8	4.2e-22	minor head protein	head and packaging
Pfam	UHGV-0017922_19	PF14200	N/A	N/A	Ricin-type beta-trefoil lectin domain-like	RicinB_lectin_2
NCBIFam	UHGV-0017922_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0017922_19	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0017922_19	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_20	phrog_33	55.0	0.000000000000002	distal tail protein Dit	tail
UniRef90	UHGV-0017922_20	UniRef90_A0A1C6JHE5	66.2	0.00000000242	Phage-related protein	N/A
eggNOG-mapper	UHGV-0017922_20	573061.Clocel_3532	64.7	0.00000000153	tail component	N/A
Pfam	UHGV-0017922_20	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0017922_20	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0017922_20	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0017922_20	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_21	phrog_13339	331.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0017922_21	UniRef90_A0A395WD11	1924.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0017922_21	999425.HMPREF9186_02045	249.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0017922_21	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0017922_21	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0017922_21	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0017922_21	PF10145,TIGR01760,TIGR02971,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_22	phrog_709	46.0	0.00000000000075	N/A	unknown function
structural_annotation	UHGV-0017922_22	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_23	phrog_88	140.1	1.19993e-41	major tail protein	tail
UniRef90	UHGV-0017922_23	UniRef90_A0A395WA58	388.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0017922_23	1033744.CAEL01000029_gene1276	153.0	3.64338e-44	Phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0017922_23	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0017922_23	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017922_24	UniRef90_A0A374RUJ8	138.0	2.36e-39	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0017922_24	86416.Clopa_0344	57.0	0.0000000176	N/A	N/A
structural_annotation	UHGV-0017922_24	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017922_25	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_26	phrog_1951	71.9	6.1e-21	head-tail adaptor	connector
UniRef90	UHGV-0017922_26	UniRef90_A0A395WC07	221.0	0	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0017922_26	1243664.CAVL020000054_gene3020	60.1	0.000000000276	head-tail adaptor	N/A
NCBIFam	UHGV-0017922_26	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0017922_26	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0017922_26	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_27	phrog_5223	46.9	0.00000000000036	neck protein	connector
UniRef90	UHGV-0017922_27	UniRef90_A0A374RXD1	77.8	1.02e-16	DNA-packaging protein	N/A
structural_annotation	UHGV-0017922_27	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_28	phrog_10	83.5	2.7e-24	major head protein	head and packaging
UniRef90	UHGV-0017922_28	UniRef90_A0A395WF70	787.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0017922_28	1536774.H70357_10630	167.0	2.52234e-44	Phage capsid family	N/A
Pfam	UHGV-0017922_28	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0017922_28	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0017922_28	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0017922_28	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0017922_29	K06904	88.2	1.1e-25	N/A	N/A
PHROG	UHGV-0017922_29	phrog_80	117.5	1.7e-34	head maturation protease	head and packaging
UniRef90	UHGV-0017922_29	UniRef90_A0A413UET6	352.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0017922_29	411470.RUMGNA_02064	174.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0017922_29	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0017922_29	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0017922_29	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0017922_29	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_30	phrog_12	103.9	1.2e-30	portal protein	head and packaging
UniRef90	UHGV-0017922_30	UniRef90_A0A395W9X2	808.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0017922_30	1203606.HMPREF1526_01337	286.0	0	Portal protein	N/A
Pfam	UHGV-0017922_30	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0017922_30	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0017922_30	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_31	phrog_9	310.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0017922_31	UniRef90_A0A395WD03	1123.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0017922_31	742740.HMPREF9474_04307	548.0	0	COG COG4626 Phage terminase-like protein, large subunit	N/A
Pfam	UHGV-0017922_31	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0017922_31	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0017922_31	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0017922_31	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_32	phrog_361	74.5	1.2e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0017922_32	UniRef90_A0A1C6H6I9	80.1	6.43e-17	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0017922_32	1329516.JPST01000017_gene431	50.1	0.00000474	Phage terminase, small subunit	N/A
Pfam	UHGV-0017922_32	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0017922_32	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0017922_32	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_33	phrog_119	58.8	9.2e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017922_33	UniRef90_A0A395WA48	264.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0017922_33	1211814.CAPG01000074_gene3460	68.2	0.000000000000339	HNH endonuclease	N/A
Pfam	UHGV-0017922_33	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0017922_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0017922_42	phrog_4525	66.7	4e-19	N/A	unknown function
PHROG	UHGV-0017922_43	phrog_2316	41.5	0.000000000022	N/A	unknown function
UniRef90	UHGV-0017922_43	UniRef90_A0A3E4YBW5	125.0	1.04e-35	N/A	N/A
eggNOG-mapper	UHGV-0017922_43	1280676.AUJO01000024_gene3262	64.3	0.00000000000302	N/A	N/A
structural_annotation	UHGV-0017922_43	PF16475,MF_00436,NF033216	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_44	phrog_478	107.4	8e-32	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0017922_44	UniRef90_A0A0J8Z1B9	176.0	0	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-0017922_44	272623.L62008	80.9	9.63e-18	N/A	N/A
UniRef90	UHGV-0017922_45	UniRef90_A0A413UEX6	293.0	0	N/A	N/A
structural_annotation	UHGV-0017922_45	PF07374,NF008895	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017922_50	PF16789	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_51	phrog_2118	123.1	2.3e-36	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017922_51	UniRef90_A0A374RH39	194.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0017922_51	610130.Closa_0730	146.0	5.1848e-44	HNH endonuclease	N/A
Pfam	UHGV-0017922_51	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0017922_51	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0017922_51	TIGR02646,COG1403	N/A	N/A	N/A	N/A
Pfam	UHGV-0017922_52	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
PHROG	UHGV-0017922_53	phrog_2715	126.5	1.5e-37	N/A	unknown function
eggNOG-mapper	UHGV-0017922_53	642492.Clole_0950	133.0	5.93e-38	N/A	N/A
structural_annotation	UHGV-0017922_53	PF18406	N/A	N/A	N/A	N/A
PHROG	UHGV-0017922_55	phrog_24490	45.3	0.0000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0017922_55	861454.HMPREF9099_00537	51.6	0.000000213	N/A	N/A
PHROG	UHGV-0017922_57	phrog_4601	41.5	0.0000000000097	N/A	unknown function
PHROG	UHGV-0017922_58	phrog_173	88.8	7.1e-26	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017922_58	UniRef90_UPI001D0A0924	266.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0017922_58	1423321.AS29_16210	67.0	0.0000000000112	dUTPase	N/A
Pfam	UHGV-0017922_58	PF08761	N/A	N/A	dUTPase	dUTPase_2
COG	UHGV-0017922_58	COG4508	N/A	N/A	Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily	N/A
structural_annotation	UHGV-0017922_58	PF08761,COG4508	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017922_59	PF11184	N/A	N/A	N/A	N/A
KOfam	UHGV-0017922_60	K00390	81.9	4.1e-24	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0017922_60	phrog_424	108.0	7.8e-32	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0017922_60	UniRef90_A0A374RXA8	410.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0017922_60	1410650.JHWL01000037_gene595	298.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0017922_60	BrxP_00001	40.8	0.0000000000000019	BrxP	BREX
Pfam	UHGV-0017922_60	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0017922_60	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0017922_60	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017922_61	PF13392,PF07453	N/A	N/A	N/A	N/A