UHGV-0018258 (vOTU-043027)

Viral Genome: UHGV-0018258

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0018258
vOTU ID	vOTU-043027
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_E_17_1727__NODE_1628_length_60809_cov_42.239511
Associated BioSample	SAMEA4766007
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	33
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9747
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.42
Jumbo phage	No

Genome content
Genome length (bp)	60,732
GC content	46.30%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	87
CDS density	91%
Average CDS length (bps)	633.59
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0018258_5	phrog_2152	125.3	9.6003e-42	N/A	unknown function
UniRef90	UHGV-0018258_5	UniRef90_UPI00156F7DE9	155.0	6.01157e-43	N/A	N/A
eggNOG-mapper	UHGV-0018258_5	742740.HMPREF9474_02318	154.0	3.79752e-43	N/A	N/A
Pfam	UHGV-0018258_5	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0018258_5	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_7	phrog_2152	232.1	0	N/A	unknown function
UniRef90	UHGV-0018258_7	UniRef90_UPI0011CA98EE	223.0	0	N/A	N/A
eggNOG-mapper	UHGV-0018258_7	411460.RUMTOR_02024	224.0	0	N/A	N/A
Pfam	UHGV-0018258_7	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0018258_7	PF19880	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0018258_12	PF18892	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_15	phrog_6721	279.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0018258_15	411473.RUMCAL_00916	241.0	0	N/A	N/A
structural_annotation	UHGV-0018258_15	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0018258_20	PF10743,TIGR01764,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0018258_23	UniRef90_UPI001936496F	95.9	1.1e-23	type I restriction endonuclease subunit M	N/A
eggNOG-mapper	UHGV-0018258_23	443144.GM21_0785	99.8	4.11e-26	N/A	N/A
PHROG	UHGV-0018258_29	phrog_881	91.4	4.3e-27	holin	lysis
UniRef90	UHGV-0018258_29	UniRef90_A0A4Q7P349	121.0	7.23e-35	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-0018258_29	742740.HMPREF9474_02251	120.0	3.78e-35	Putative phage holin Dp-1	N/A
Pfam	UHGV-0018258_29	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0018258_29	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_30	phrog_37604	72.8	3.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0018258_30	1123075.AUDP01000020_gene1531	128.0	3.5e-36	N/A	N/A
KOfam	UHGV-0018258_32	K14059	208.9	0	int; integrase	N/A
PHROG	UHGV-0018258_32	phrog_1	196.5	0	integrase	integration and excision
UniRef90	UHGV-0018258_32	UniRef90_A0A1Y3SS19	158.0	6.8005e-42	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0018258_32	1235793.C809_03065	145.0	1.29e-37	Phage integrase family	N/A
Pfam	UHGV-0018258_32	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0018258_32	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0018258_32	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0018258_32	PF00589,PF02920,MF_01808,TIGR02224,COG4974,COG3422	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0018258_33	658655.HMPREF0988_00915	55.5	0.000000611	N/A	N/A
PHROG	UHGV-0018258_34	phrog_20016	58.0	1.3e-16	N/A	unknown function
structural_annotation	UHGV-0018258_34	PF00386,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_35	phrog_16490	119.4	1.5e-35	N/A	unknown function
eggNOG-mapper	UHGV-0018258_35	397290.C810_01328	129.0	4.44e-33	N/A	N/A
eggNOG-mapper	UHGV-0018258_37	397290.C810_01326	56.6	0.0000000464	N/A	N/A
PHROG	UHGV-0018258_38	phrog_14030	118.9	2.2e-35	N/A	unknown function
UniRef90	UHGV-0018258_38	UniRef90_A0A416FZN6	187.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0018258_38	411461.DORFOR_00720	153.0	1.08993e-41	N/A	N/A
Pfam	UHGV-0018258_38	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0018258_38	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
structural_annotation	UHGV-0018258_38	PF01471,PF18342,TIGR02869,TIGR04457,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_40	phrog_13589	47.1	6.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-0018258_40	411471.SUBVAR_06929	338.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0018258_40	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0018258_42	PF16640	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0018258_43	PF00927,PF03422,MF_04116,NF040680,COG4326	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_46	phrog_1067	180.3	0	minor head protein	head and packaging
UniRef90	UHGV-0018258_46	UniRef90_A0A3D2JIN2	221.0	0	SH3b domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0018258_46	1540257.JQMW01000009_gene3384	134.0	1.68e-29	Phage minor structural protein	N/A
Pfam	UHGV-0018258_46	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0018258_46	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0018258_46	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0018258_46	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-0018258_47	UniRef90_A0A7C6FS63	177.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0018258_47	931276.Cspa_c07550	112.0	1.89e-27	tail component	N/A
COG	UHGV-0018258_47	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0018258_47	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_50	phrog_4372	406.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0018258_50	UniRef90_UPI0018A04E48	301.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0018258_50	665956.HMPREF1032_00686	285.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0018258_50	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0018258_50	COG5412	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-0018258_51	UniRef90_UPI0018A05088	140.0	8.49005e-41	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0018258_51	478749.BRYFOR_08514	127.0	2.98e-36	N/A	N/A
Pfam	UHGV-0018258_51	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0018258_51	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_52	phrog_4338	246.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0018258_52	411460.RUMTOR_01339	191.0	0	N/A	N/A
PHROG	UHGV-0018258_53	phrog_4282	146.1	1.30321e-43	N/A	unknown function
eggNOG-mapper	UHGV-0018258_53	478749.BRYFOR_08517	87.8	7.5e-20	N/A	N/A
PHROG	UHGV-0018258_54	phrog_2645	318.1	0	major tail protein	tail
UniRef90	UHGV-0018258_54	UniRef90_A0A644ZQB8	272.0	0	Big_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0018258_54	742733.HMPREF9469_05026	239.0	0	N/A	N/A
Pfam	UHGV-0018258_54	PF06488	N/A	N/A	Phage tail tube protein	L_lac_phage_MSP
structural_annotation	UHGV-0018258_54	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_55	phrog_78	42.5	0.000000000011	tail terminator	connector
UniRef90	UHGV-0018258_55	UniRef90_D4P7D8	123.0	1.57e-34	Structural protein	N/A
eggNOG-mapper	UHGV-0018258_55	691965.D4P7D8_9CAUD	123.0	2.63e-35	N/A	N/A
structural_annotation	UHGV-0018258_55	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_56	phrog_4270	166.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0018258_56	665956.HMPREF1032_00677	160.0	0	N/A	N/A
structural_annotation	UHGV-0018258_56	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-0018258_58	K06904	59.1	5.2e-17	N/A	N/A
PHROG	UHGV-0018258_58	phrog_3270	750.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0018258_58	UniRef90_A0A1Y4MXD5	717.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0018258_58	691965.D4P7D6_9CAUD	481.0	0	peptidase activity	N/A
Pfam	UHGV-0018258_58	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
Pfam	UHGV-0018258_58	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0018258_58	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0018258_58	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_59	phrog_12	117.2	9.8e-35	portal protein	head and packaging
UniRef90	UHGV-0018258_59	UniRef90_A0A1Y4MMD6	531.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0018258_59	411460.RUMTOR_01348	539.0	0	Phage portal protein	N/A
Pfam	UHGV-0018258_59	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0018258_59	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_60	phrog_32444	59.5	5.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0018258_60	665956.HMPREF1032_00673	62.4	0.00000000102	N/A	N/A
PHROG	UHGV-0018258_61	phrog_7502	54.0	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0018258_61	665956.HMPREF1032_00673	65.1	0.000000000452	N/A	N/A
PHROG	UHGV-0018258_63	phrog_9	266.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0018258_63	UniRef90_UPI00164ADDE6	925.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0018258_63	665956.HMPREF1032_00672	924.0	0	Phage Terminase	N/A
Pfam	UHGV-0018258_63	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0018258_63	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0018258_63	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0018258_63	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_64	phrog_7021	73.2	1.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0018258_64	478749.BRYFOR_08525	68.6	0.00000000000233	N/A	N/A
PHROG	UHGV-0018258_65	phrog_4247	142.9	6.69821e-43	virion structural protein	head and packaging
UniRef90	UHGV-0018258_65	UniRef90_D4P7C3	112.0	8.51e-30	Structural protein	N/A
eggNOG-mapper	UHGV-0018258_65	428125.CLOLEP_01407	115.0	7.74e-32	N/A	N/A
PHROG	UHGV-0018258_66	phrog_4321	202.2	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018258_66	UniRef90_A0A6M3SUQ0	172.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0018258_66	742733.HMPREF9469_05036	180.0	0	N/A	N/A
PHROG	UHGV-0018258_67	phrog_4259	141.7	1.3999e-42	N/A	unknown function
UniRef90	UHGV-0018258_67	UniRef90_D4P7B9	106.0	1.63e-27	Gp008	N/A
eggNOG-mapper	UHGV-0018258_67	691965.D4P7B9_9CAUD	106.0	2.73e-28	N/A	N/A
PHROG	UHGV-0018258_68	phrog_4303	113.6	6.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-0018258_68	742733.HMPREF9469_05038	87.4	1.35e-21	N/A	N/A
PHROG	UHGV-0018258_69	phrog_4291	1185.7	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018258_69	UniRef90_A0A5J6D7Z5	806.0	0	Helix-turn-helix DNA binding domain protein	N/A
eggNOG-mapper	UHGV-0018258_69	742740.HMPREF9474_02278	769.0	0	N/A	N/A
Pfam	UHGV-0018258_69	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
Pfam	UHGV-0018258_69	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
structural_annotation	UHGV-0018258_69	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_70	phrog_3953	191.1	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018258_70	UniRef90_UPI001D06A0CE	233.0	0	N/A	N/A
eggNOG-mapper	UHGV-0018258_70	742740.HMPREF9474_02279	232.0	0	N/A	N/A
structural_annotation	UHGV-0018258_70	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
UniRef90	UHGV-0018258_71	UniRef90_A0A140G723	132.0	6.01e-38	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0018258_71	742740.HMPREF9474_02280	131.0	1.27e-38	N/A	N/A
structural_annotation	UHGV-0018258_71	PF01870,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_72	phrog_62	100.5	1.1e-29	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018258_72	UniRef90_A0A374JNH7	452.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0018258_72	742740.HMPREF9474_02299	449.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-0018258_72	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0018258_72	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_73	phrog_4787	167.0	0	single strand annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0018258_73	742733.HMPREF9469_05065	140.0	2.14001e-40	N/A	N/A
structural_annotation	UHGV-0018258_73	PF21265,MF_04153	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_74	phrog_236	99.5	6.2e-29	nucleotide kinase	other
UniRef90	UHGV-0018258_74	UniRef90_A0A838B6V4	75.9	0.00000000000000105	N/A	N/A
eggNOG-mapper	UHGV-0018258_74	247490.KSU1_C1079	93.6	1.5e-23	N/A	N/A
Pfam	UHGV-0018258_74	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-0018258_75	phrog_19852	63.7	1.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0018258_75	742733.HMPREF9469_05061	53.9	0.00000000276	N/A	N/A
PHROG	UHGV-0018258_76	phrog_4210	2040.0	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018258_76	UniRef90_A0A1Y4MWK5	1628.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0018258_76	428125.CLOLEP_01375	1594.0	0	DNA polymerase type-B family	N/A
Pfam	UHGV-0018258_76	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0018258_76	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
structural_annotation	UHGV-0018258_76	PF00136,PF09250,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_79	phrog_4678	159.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0018258_79	742740.HMPREF9474_02306	129.0	2.2e-35	N/A	N/A
PHROG	UHGV-0018258_81	phrog_4695	56.3	3.9e-16	N/A	unknown function
PHROG	UHGV-0018258_82	phrog_2152	248.4	0	N/A	unknown function
UniRef90	UHGV-0018258_82	UniRef90_UPI00195EDEA1	205.0	0	N/A	N/A
eggNOG-mapper	UHGV-0018258_82	742740.HMPREF9474_02310	206.0	0	N/A	N/A
Pfam	UHGV-0018258_82	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0018258_82	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0018258_84	phrog_4079	171.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0018258_84	665950.HMPREF1025_01947	125.0	4.42e-33	N/A	N/A
PHROG	UHGV-0018258_85	phrog_7539	56.0	4.5e-16	N/A	unknown function