UHGV-0019221 (vOTU-085266)

Viral Genome: UHGV-0019221

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0019221
vOTU ID	vOTU-085266
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_J_22_1662__NODE_2696_length_39841_cov_4.029625
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.12 (High-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9808
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.46
Jumbo phage	No

Genome content
Genome length (bp)	39,841
GC content	54.57%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	93%
Average CDS length (bps)	689.11
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.12)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0019221_1	phrog_757	126.6	1.5e-37	DNA methyltransferase	other
UniRef90	UHGV-0019221_1	UniRef90_A0A3A6EPW1	158.0	1.4013e-45	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0019221_1	397290.C810_01487	146.0	9.99967e-42	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0019221_1	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0019221_2	phrog_757	51.4	0.000000000000017	DNA methyltransferase	other
UniRef90	UHGV-0019221_2	UniRef90_A0A7J2R6L5	70.5	0.00000000000000529	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0019221_2	748224.HMPREF9436_03069	101.0	3.88e-26	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0019221_2	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0019221_5	phrog_16304	83.3	3.7e-24	N/A	unknown function
UniRef90	UHGV-0019221_5	UniRef90_UPI001C10203E	138.0	6.63e-37	N/A	N/A
eggNOG-mapper	UHGV-0019221_5	498761.HM1_0053	82.0	0.00000000000000257	HNH endonuclease	N/A
Pfam	UHGV-0019221_5	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0019221_5	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0019221_5	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0019221_6	K03111	126.4	3.6e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0019221_6	phrog_44	132.2	3.7e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019221_6	UniRef90_A0A3D2HZK1	196.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0019221_6	1007096.BAGW01000007_gene1922	179.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0019221_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0019221_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0019221_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0019221_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0019221_6	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_7	phrog_72	42.7	0.0000000000027	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019221_7	UniRef90_UPI000C7BF263	74.7	0.000000000000133	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0019221_7	445972.ANACOL_01825	72.8	0.000000000000141	N/A	N/A
structural_annotation	UHGV-0019221_7	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_8	phrog_7838	131.9	5.1e-39	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019221_8	UniRef90_A0A8D9UGW3	152.0	1.32002e-42	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0019221_8	742767.HMPREF9456_02052	138.0	4.23e-38	N/A	N/A
structural_annotation	UHGV-0019221_8	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_9	phrog_17740	46.3	0.0000000000005	N/A	unknown function
eggNOG-mapper	UHGV-0019221_9	1408437.JNJN01000010_gene1229	71.6	4.83e-16	N/A	N/A
structural_annotation	UHGV-0019221_9	PF13560,COG3423	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_11	phrog_253	121.7	5e-36	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019221_11	UniRef90_A0A1C6KA77	119.0	5.02e-31	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0019221_11	397290.C810_05162	125.0	1.36e-34	Siphovirus Gp157	N/A
Pfam	UHGV-0019221_11	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0019221_11	PF05565	N/A	N/A	N/A	N/A
KOfam	UHGV-0019221_18	K18830	54.7	0.0000000000000023	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0019221_18	phrog_2967	57.4	3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0019221_18	UniRef90_A0A1Y4RX49	94.4	1.77e-22	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0019221_18	1203606.HMPREF1526_01317	83.2	5.75e-19	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0019221_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0019221_18	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0019221_18	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0019221_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0019221_21	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019221_22	715451.ambt_14505	85.1	6.08e-17	N/A	N/A
KOfam	UHGV-0019221_23	K14059	140.9	1.29998e-41	int; integrase	N/A
PHROG	UHGV-0019221_23	phrog_1	155.4	0	integrase	integration and excision
UniRef90	UHGV-0019221_23	UniRef90_A0A3D3Y5E0	302.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0019221_23	693746.OBV_41260	232.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0019221_23	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0019221_23	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0019221_23	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019221_24	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_25	phrog_20016	165.4	0	N/A	unknown function
UniRef90	UHGV-0019221_25	UniRef90_A0A345BPX4	148.0	2.60642e-43	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0019221_25	1226322.HMPREF1545_00077	137.0	8.29e-40	N/A	N/A
structural_annotation	UHGV-0019221_25	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_26	phrog_16490	111.2	1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0019221_26	1408437.JNJN01000043_gene803	92.8	6.44e-20	N/A	N/A
PHROG	UHGV-0019221_27	phrog_22984	66.5	3.9e-19	N/A	unknown function
PHROG	UHGV-0019221_28	phrog_21718	76.5	3.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0019221_28	476272.RUMHYD_01768	81.3	5.33e-18	N/A	N/A
PHROG	UHGV-0019221_29	phrog_3754	94.9	7.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-0019221_29	476272.RUMHYD_01764	147.0	3.78351e-44	N/A	N/A
structural_annotation	UHGV-0019221_30	PF07638,MF_00674,TIGR02954,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_31	phrog_1129	83.0	2e-24	holin	lysis
UniRef90	UHGV-0019221_31	UniRef90_A0A316A1J8	105.0	9.48e-28	Holin family Hol44 protein (Superfamily V)	N/A
eggNOG-mapper	UHGV-0019221_31	1256908.HMPREF0373_00463	96.3	4.91e-25	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0019221_31	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0019221_31	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_32	phrog_4105	102.6	2.3e-30	N/A	unknown function
UniRef90	UHGV-0019221_32	UniRef90_A0A8D9UHA9	130.0	1.38e-37	Holin protein	N/A
eggNOG-mapper	UHGV-0019221_32	742733.HMPREF9469_05011	139.0	1.19993e-41	N/A	N/A
KOfam	UHGV-0019221_33	K08640	88.1	4.7e-26	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0019221_33	phrog_2649	57.8	6.8e-19	endolysin	lysis
UniRef90	UHGV-0019221_33	UniRef90_UPI001C12323B	220.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0019221_33	931626.Awo_c26840	94.7	1.09e-21	Peptidase M15	N/A
Pfam	UHGV-0019221_33	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0019221_33	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0019221_33	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019221_33	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_34	phrog_22978	729.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0019221_34	1226322.HMPREF1545_00787	102.0	4.14e-18	N/A	N/A
Pfam	UHGV-0019221_34	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
UniRef90	UHGV-0019221_35	UniRef90_R5DCX9	135.0	2.01e-33	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0019221_35	1410650.JHWL01000003_gene2815	112.0	3.2e-25	N/A	N/A
PHROG	UHGV-0019221_36	phrog_2310	51.4	0.0000000000000098	N/A	unknown function
eggNOG-mapper	UHGV-0019221_36	1151292.QEW_0364	47.8	0.000000862	N/A	N/A
structural_annotation	UHGV-0019221_38	PF03425,NF038128,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_40	phrog_24103	71.9	8.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0019221_40	1118055.CAGU01000013_gene761	83.6	8.1e-17	N/A	N/A
PHROG	UHGV-0019221_42	phrog_15594	45.4	0.0000000000014	N/A	unknown function
structural_annotation	UHGV-0019221_42	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_44	phrog_511	201.4	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0019221_44	1519439.JPJG01000060_gene1903	321.0	0	N/A	N/A
structural_annotation	UHGV-0019221_44	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_45	phrog_12105	127.1	7.5e-38	N/A	unknown function
eggNOG-mapper	UHGV-0019221_45	1226322.HMPREF1545_03850	64.3	0.0000000000168	N/A	N/A
PHROG	UHGV-0019221_46	phrog_15239	49.5	0.000000000000062	N/A	unknown function
PHROG	UHGV-0019221_47	phrog_1357	277.0	0	major head protein	head and packaging
UniRef90	UHGV-0019221_47	UniRef90_A0A2V2GQW4	378.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0019221_47	748224.HMPREF9436_01399	346.0	0	N/A	N/A
Pfam	UHGV-0019221_47	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0019221_47	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0019221_47	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_48	phrog_13908	212.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0019221_48	1410650.JHWL01000003_gene2831	98.6	4.23e-21	N/A	N/A
KOfam	UHGV-0019221_49	K07584	45.0	0.0000000000018	N/A	N/A
PHROG	UHGV-0019221_49	phrog_4478	55.4	7.8e-16	peptidase	other
UniRef90	UHGV-0019221_49	UniRef90_R5J236	53.5	0.00000144	Putative ribosomal protein	N/A
eggNOG-mapper	UHGV-0019221_49	1229517.AMFD01000015_gene2036	51.2	0.00000143	Pfam:Peptidase_C108	N/A
Pfam	UHGV-0019221_49	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0019221_49	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019221_49	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0019221_50	phrog_156	327.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0019221_50	1410650.JHWL01000003_gene2833	574.0	0	N/A	N/A
structural_annotation	UHGV-0019221_50	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0019221_51	K06909	132.6	3.4e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0019221_51	phrog_979	130.5	1.8e-40	terminase large subunit	head and packaging
UniRef90	UHGV-0019221_51	UniRef90_A0A3D5TIM8	627.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0019221_51	1410650.JHWL01000003_gene2834	610.0	0	N/A	N/A
Pfam	UHGV-0019221_51	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0019221_51	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0019221_51	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A