UHGV-0020128 (vOTU-059556)

Viral Genome: UHGV-0020128

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0020128
vOTU ID	vOTU-059556
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_E_15_1726__NODE_2136_length_39072_cov_5.159200
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.11 (High-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9766
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.9
Jumbo phage	No

Genome content
Genome length (bp)	39,072
GC content	43.65%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	92%
Average CDS length (bps)	703.88
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0020128_1	K07273	82.6	6.5e-24	acm; lysozyme	N/A
PHROG	UHGV-0020128_1	phrog_291	64.2	2.7e-18	endolysin	lysis
UniRef90	UHGV-0020128_1	UniRef90_B0NER8	65.5	0.00000000000612	Lysozyme M1	N/A
eggNOG-mapper	UHGV-0020128_1	1121115.AXVN01000006_gene2170	137.0	9.29e-38	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-0020128_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0020128_1	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0020128_1	PF01183	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_2	phrog_1129	88.5	3.8e-26	holin	lysis
UniRef90	UHGV-0020128_2	UniRef90_UPI00051B7422	152.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0020128_2	1121115.AXVN01000006_gene2171	159.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0020128_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0020128_2	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_3	phrog_4105	88.1	7.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0020128_3	411459.RUMOBE_00911	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-0020128_4	457412.RSAG_04673	58.5	0.0000000000594	N/A	N/A
PHROG	UHGV-0020128_7	phrog_19280	89.0	3.8e-26	N/A	unknown function
UniRef90	UHGV-0020128_7	UniRef90_A0A413UF00	430.0	0	N/A	N/A
eggNOG-mapper	UHGV-0020128_7	1160721.RBI_I01569	124.0	9.53e-29	N/A	N/A
Pfam	UHGV-0020128_7	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0020128_7	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020128_8	457412.RSAG_01112	90.5	4.65e-17	N/A	N/A
PHROG	UHGV-0020128_9	phrog_16164	253.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0020128_9	33035.JPJF01000093_gene2236	70.1	0.0000000000102	N/A	N/A
structural_annotation	UHGV-0020128_9	PF10651,NF032891	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_10	phrog_6616	853.3	0	tail protein	tail
UniRef90	UHGV-0020128_10	UniRef90_UPI00156E2BA6	1493.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0020128_10	411470.RUMGNA_00116	79.7	0.0000000000037	cellulase activity	N/A
COG	UHGV-0020128_10	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0020128_10	PF05113,PF02010,NF033848,NF007392,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_11	phrog_1194	84.7	8.6e-25	N/A	unknown function
structural_annotation	UHGV-0020128_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_12	phrog_1535	720.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0020128_12	UniRef90_A0A174LLY7	870.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0020128_12	411459.RUMOBE_01384	722.0	0	phage tail tape measure protein	N/A
COG	UHGV-0020128_12	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0020128_13	phrog_706	148.4	3.92364e-44	N/A	unknown function
UniRef90	UHGV-0020128_13	UniRef90_UPI00156F1927	367.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0020128_13	476272.RUMHYD_01784	203.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0020128_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0020128_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_14	phrog_11299	153.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0020128_14	33035.JPJF01000106_gene3125	99.4	1.34e-24	N/A	N/A
structural_annotation	UHGV-0020128_14	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_15	phrog_3099	145.8	2.10195e-43	N/A	unknown function
eggNOG-mapper	UHGV-0020128_15	476272.RUMHYD_01782	227.0	0	N/A	N/A
structural_annotation	UHGV-0020128_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_16	phrog_3266	116.7	1.2e-34	tail completion	connector
eggNOG-mapper	UHGV-0020128_16	663278.Ethha_0098	53.5	0.000000583	N/A	N/A
structural_annotation	UHGV-0020128_16	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_17	phrog_556	72.1	6.5e-21	minor head protein	head and packaging
UniRef90	UHGV-0020128_17	UniRef90_UPI00156EFCF3	298.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0020128_17	1449050.JNLE01000003_gene3886	77.4	4.49e-16	N/A	N/A
Pfam	UHGV-0020128_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0020128_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_18	phrog_3366	116.4	1.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-0020128_18	645991.Sgly_0343	55.5	0.0000000705	N/A	N/A
Pfam	UHGV-0020128_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0020128_18	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_19	phrog_541	98.1	6.7e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0020128_19	1304866.K413DRAFT_3039	71.2	0.000000000000039	N/A	N/A
PHROG	UHGV-0020128_20	phrog_422	212.2	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0020128_20	411470.RUMGNA_02219	491.0	0	N/A	N/A
structural_annotation	UHGV-0020128_20	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_21	phrog_194	103.4	2.7e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-0020128_21	UniRef90_A5KPA4	275.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0020128_21	658655.HMPREF0988_02561	281.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0020128_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0020128_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_22	phrog_15041	126.0	7.5e-38	N/A	unknown function
eggNOG-mapper	UHGV-0020128_22	478749.BRYFOR_07608	56.2	0.00000000162	N/A	N/A
structural_annotation	UHGV-0020128_22	PF10827	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_23	phrog_581	310.8	0	minor head protein	head and packaging
UniRef90	UHGV-0020128_23	UniRef90_UPI00156DA0DB	918.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0020128_23	1235799.C818_04219	374.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0020128_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0020128_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020128_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_24	phrog_533	307.0	0	portal protein	head and packaging
UniRef90	UHGV-0020128_24	UniRef90_A0A174B716	654.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0020128_24	658655.HMPREF0988_02564	660.0	0	N/A	N/A
structural_annotation	UHGV-0020128_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0020128_25	K06909	87.8	1.4e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0020128_25	phrog_2	84.6	1.9e-24	terminase large subunit	head and packaging
UniRef90	UHGV-0020128_25	UniRef90_F3BAE1	759.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0020128_25	742723.HMPREF9477_00911	759.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0020128_25	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0020128_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0020128_25	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0020128_26	K07474	110.1	3.4e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0020128_26	phrog_2606	325.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-0020128_26	UniRef90_UPI001D08595A	405.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0020128_26	478749.BRYFOR_07604	301.0	0	terminase, small subunit	N/A
Pfam	UHGV-0020128_26	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0020128_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0020128_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0020128_26	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0020128_27	K12805	81.5	7e-24	NLRC4, CARD12; NLR family CARD domain-containing protein 4	N/A
PHROG	UHGV-0020128_27	phrog_18297	324.2	0	N/A	unknown function
UniRef90	UHGV-0020128_27	UniRef90_UPI000D71D509	707.0	0	NACHT domain-containing protein	N/A
eggNOG-mapper	UHGV-0020128_27	764299.STRIC_0832	360.0	0	Nacht domain	N/A
Pfam	UHGV-0020128_27	PF05729	N/A	N/A	NACHT domain	NACHT
COG	UHGV-0020128_27	COG5635	N/A	N/A	Predicted NTPase, NACHT family domain	N/A
structural_annotation	UHGV-0020128_27	PF20702,MF_00553,NF001624,COG5635	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_28	phrog_36	75.8	5.5e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020128_28	UniRef90_UPI001571211B	157.0	0	N/A	N/A
eggNOG-mapper	UHGV-0020128_28	1123075.AUDP01000020_gene1515	99.0	1.96e-24	sigma factor activity	N/A
Pfam	UHGV-0020128_28	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0020128_28	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0020128_28	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020128_30	1232443.BAIA02000078_gene48	54.7	0.0000000479	N/A	N/A
UniRef90	UHGV-0020128_31	UniRef90_A0A414EGF0	77.0	0.0000000000000104	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0020128_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0020128_31	PF01710,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_32	phrog_4601	42.1	0.0000000000061	N/A	unknown function
structural_annotation	UHGV-0020128_32	PF17888	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_33	phrog_7566	101.3	4.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0020128_33	411459.RUMOBE_00948	177.0	0	N/A	N/A
KOfam	UHGV-0020128_35	K03497	61.9	1.4e-17	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0020128_35	phrog_15077	170.8	0	N/A	unknown function
UniRef90	UHGV-0020128_35	UniRef90_UPI000E434A4F	854.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0020128_35	1235792.C808_00610	186.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0020128_35	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0020128_35	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0020128_35	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0020128_36	K03496	201.3	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0020128_36	phrog_164	158.6	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020128_36	UniRef90_A0A1C5REE7	438.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-0020128_36	97139.C824_00725	278.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0020128_36	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0020128_36	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0020128_36	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020128_38	UniRef90_A0A1C5RDL1	241.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0020128_38	411461.DORFOR_01140	109.0	3.69e-28	RNA-DNA hybrid ribonuclease activity	N/A
COG	UHGV-0020128_38	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0020128_38	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_39	phrog_3584	140.1	1.6e-41	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020128_39	UniRef90_UPI001D0EB55A	303.0	0	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0020128_39	483218.BACPEC_01173	182.0	0	N/A	N/A
structural_annotation	UHGV-0020128_39	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_44	phrog_750	40.5	0.000000000035	N/A	unknown function
structural_annotation	UHGV-0020128_44	PF13835,NF040858	N/A	N/A	N/A	N/A
KOfam	UHGV-0020128_47	K22300	53.1	0.0000000000000069	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0020128_47	phrog_2967	47.2	0.0000000000003	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020128_47	UniRef90_UPI00156EF7CE	155.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0020128_47	411470.RUMGNA_02181	108.0	1.71e-28	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0020128_47	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0020128_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020128_47	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0020128_49	K07448	115.6	4.4e-34	mrr; restriction system protein	N/A
PHROG	UHGV-0020128_49	phrog_13700	56.2	3.8e-16	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0020128_49	UniRef90_A0A1C5VRQ1	362.0	0	Stage III sporulation protein E	N/A
eggNOG-mapper	UHGV-0020128_49	397290.C810_01426	153.0	4.86e-38	Restriction endonuclease	N/A
PADLOC	UHGV-0020128_49	ZorD1_00005	56.7	2.8e-16	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0020128_49	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
Pfam	UHGV-0020128_49	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
Pfam	UHGV-0020128_49	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0020128_49	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
KOfam	UHGV-0020128_50	K06400	301.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0020128_50	phrog_95	330.3	0	integrase	integration and excision
UniRef90	UHGV-0020128_50	UniRef90_A0A415FHQ5	756.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0020128_50	33035.JPJF01000109_gene439	647.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0020128_50	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0020128_50	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0020128_50	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0020128_50	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0020128_50	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0020128_51	phrog_28785	70.9	2e-20	N/A	unknown function
UniRef90	UHGV-0020128_51	UniRef90_A0A7U9SPJ5	59.7	0.0000000000946	SpoIID domain-containing protein	N/A
eggNOG-mapper	UHGV-0020128_51	411459.RUMOBE_02836	77.8	1.5e-16	N/A	N/A
COG	UHGV-0020128_51	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A