UHGV-0020321 (vOTU-043209)

Viral Genome: UHGV-0020321

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0020321
vOTU ID	vOTU-043209
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_E_15_1726__NODE_2437_length_35806_cov_50.279745
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9825
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	47.48
Jumbo phage	No

Genome content
Genome length (bp)	35,768
GC content	55.79%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	91%
Average CDS length (bps)	518.76
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0020321_1	phrog_4433	157.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0020321_1	33035.JPJF01000122_gene2458	130.0	5.99e-35	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0020321_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
KOfam	UHGV-0020321_2	K02315	138.5	5.79997e-41	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0020321_2	phrog_50	122.0	5.6e-36	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020321_2	UniRef90_A0A3A9ED12	156.0	1.15047e-42	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0020321_2	1232447.BAHW02000027_gene2105	157.0	5.04467e-44	N/A	N/A
Pfam	UHGV-0020321_2	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0020321_2	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0020321_2	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_3	phrog_2149	76.4	4.1e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020321_3	UniRef90_A0A417QFV0	201.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0020321_3	1095750.HMPREF9970_1674	125.0	7.27e-32	N/A	N/A
structural_annotation	UHGV-0020321_3	PF10771,NF041413,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_4	phrog_18107	103.0	3.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-0020321_4	476272.RUMHYD_01739	158.0	0	N/A	N/A
structural_annotation	UHGV-0020321_4	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_5	phrog_2872	220.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020321_5	UniRef90_A0A843H8D6	293.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0020321_5	1415774.U728_1119	290.0	0	AAA domain	N/A
structural_annotation	UHGV-0020321_5	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_9	phrog_5781	77.0	2.5e-22	N/A	unknown function
UniRef90	UHGV-0020321_9	UniRef90_A0A2V2FSM6	100.0	1.46e-25	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0020321_9	573061.Clocel_3558	102.0	7.88e-27	N/A	N/A
Pfam	UHGV-0020321_9	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0020321_9	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0020321_9	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_16	phrog_5610	65.1	5.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0020321_16	655812.HMPREF0061_0218	117.0	3.89e-29	N/A	N/A
Pfam	UHGV-0020321_16	PF16729	N/A	N/A	N/A	DUF5067
COG	UHGV-0020321_16	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
eggNOG-mapper	UHGV-0020321_17	428127.EUBDOL_00130	52.4	0.00000253	sequence-specific DNA binding	N/A
COG	UHGV-0020321_17	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0020321_17	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0020321_18	K06400	295.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0020321_18	phrog_95	306.2	0	integrase	integration and excision
UniRef90	UHGV-0020321_18	UniRef90_A0A3A9I9T1	358.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0020321_18	1378168.N510_03180	271.0	0	resolvase	N/A
Pfam	UHGV-0020321_18	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0020321_18	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0020321_18	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0020321_18	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0020321_20	K07726	50.0	0.000000000000054	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0020321_20	phrog_2104	46.8	0.00000000000048	N/A	unknown function
UniRef90	UHGV-0020321_20	UniRef90_A0A414P8A6	65.9	0.000000000000638	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0020321_20	1410631.JHWZ01000002_gene1263	64.7	0.000000000000384	sequence-specific DNA binding	N/A
Pfam	UHGV-0020321_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020321_20	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0020321_20	PF15731,NF007481,COG2944	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020321_21	1226322.HMPREF1545_00079	92.8	5.28e-23	N/A	N/A
structural_annotation	UHGV-0020321_22	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_23	phrog_20016	191.0	0	N/A	unknown function
UniRef90	UHGV-0020321_23	UniRef90_A0A285PT46	197.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0020321_23	1226322.HMPREF1545_00077	171.0	0	N/A	N/A
structural_annotation	UHGV-0020321_23	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_24	phrog_16490	115.4	4.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-0020321_24	1408437.JNJN01000043_gene803	158.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0020321_25	phrog_22984	85.4	4.9e-25	N/A	unknown function
PHROG	UHGV-0020321_26	phrog_21718	93.8	1.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0020321_26	397290.C810_05210	80.5	3.03e-17	N/A	N/A
PHROG	UHGV-0020321_27	phrog_3754	95.2	5.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0020321_27	476272.RUMHYD_01764	150.0	1.4013e-45	N/A	N/A
UniRef90	UHGV-0020321_28	UniRef90_A0A8D9PDT6	68.9	0.000000000000167	Transcriptional regulatory protein	N/A
PHROG	UHGV-0020321_30	phrog_881	66.8	2.2e-19	holin	lysis
UniRef90	UHGV-0020321_30	UniRef90_UPI001D0692FC	90.1	2.43e-22	phage holin	N/A
eggNOG-mapper	UHGV-0020321_30	476272.RUMHYD_01966	87.0	7.14e-22	Putative phage holin Dp-1	N/A
Pfam	UHGV-0020321_30	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0020321_30	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_31	phrog_37604	82.7	3.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0020321_31	585501.HMPREF6123_0817	75.5	0.00000000000000194	N/A	N/A
KOfam	UHGV-0020321_32	K07273	138.4	7.69999e-41	acm; lysozyme	N/A
PHROG	UHGV-0020321_32	phrog_291	117.6	1.5e-34	endolysin	lysis
UniRef90	UHGV-0020321_32	UniRef90_A0A3D2G0D9	412.0	0	Cpl-7 domain-containing protein	N/A
eggNOG-mapper	UHGV-0020321_32	877415.JNJQ01000013_gene314	167.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0020321_32	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0020321_32	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0020321_32	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0020321_32	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_34	phrog_9534	125.7	4.8e-37	head protein	head and packaging
UniRef90	UHGV-0020321_34	UniRef90_UPI0015C5CE46	82.4	0.0000000000000282	tail fiber protein	N/A
eggNOG-mapper	UHGV-0020321_34	748224.HMPREF9436_00702	96.3	2.28e-20	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0020321_34	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_35	phrog_538	99.9	2.4e-29	minor tail protein	tail
UniRef90	UHGV-0020321_35	UniRef90_UPI001C113FEF	344.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0020321_35	931626.Awo_c34990	67.0	0.00000000171	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0020321_35	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0020321_35	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_36	phrog_36410	65.6	5.6e-19	N/A	unknown function
UniRef90	UHGV-0020321_36	UniRef90_UPI001C0FCFFA	362.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0020321_36	411471.SUBVAR_06982	102.0	7.01e-23	Phage tail protein	N/A
structural_annotation	UHGV-0020321_36	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_37	phrog_23464	259.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0020321_37	665950.HMPREF1025_02660	261.0	0	phage tail tape measure protein	N/A
COG	UHGV-0020321_37	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0020321_37	PF20155,MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_39	phrog_885	70.8	1.6e-20	major tail protein	tail
UniRef90	UHGV-0020321_39	UniRef90_A0A843J9F0	200.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0020321_39	1504822.CCNO01000012_gene492	227.0	0	N/A	N/A
structural_annotation	UHGV-0020321_39	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020321_40	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_41	phrog_17977	41.2	0.000000000024	N/A	unknown function
Pfam	UHGV-0020321_41	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0020321_41	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0020321_41	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_43	phrog_267	186.0	0	major head protein	head and packaging
UniRef90	UHGV-0020321_43	UniRef90_A0A3Q9B9E4	262.0	0	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0020321_43	673376.F2VHW8_9CAUD	261.0	0	viral capsid	N/A
Pfam	UHGV-0020321_43	PF19821	N/A	N/A	Phage capsid protein	Phage_capsid_2
structural_annotation	UHGV-0020321_43	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020321_44	UniRef90_A0A6B9SU02	89.0	1.68e-18	Fibronectin autolysin	N/A
structural_annotation	UHGV-0020321_44	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_45	phrog_5	67.5	2.7e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-0020321_45	UniRef90_UPI000691EB78	72.4	0.000000000000175	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0020321_45	1280689.AUJC01000007_gene3313	58.2	0.00000000854	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0020321_45	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0020321_45	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_47	phrog_2468	105.5	7.2e-31	head morphogenesis	head and packaging
UniRef90	UHGV-0020321_47	UniRef90_A0A4D7AUA1	338.0	0	Phage head morphogenesis protein	N/A
eggNOG-mapper	UHGV-0020321_47	1504822.CCNO01000013_gene286	145.0	8.13e-35	cell adhesion	N/A
Pfam	UHGV-0020321_47	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0020321_47	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020321_47	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_48	phrog_64	164.7	0	portal protein	head and packaging
UniRef90	UHGV-0020321_48	UniRef90_UPI0018A8A301	598.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0020321_48	673376.F2VHW1_9CAUD	209.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0020321_48	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0020321_48	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_49	phrog_38	164.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0020321_49	UniRef90_D2J053	409.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0020321_49	1140001.I571_01829	416.0	0	N/A	N/A
structural_annotation	UHGV-0020321_49	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
KOfam	UHGV-0020321_50	K07474	141.3	9.99967e-42	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0020321_50	phrog_51	139.8	1.19993e-41	terminase small subunit	head and packaging
UniRef90	UHGV-0020321_50	UniRef90_A0A1I5G7W6	166.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0020321_50	445971.ANASTE_00710	133.0	8.3e-38	Terminase small subunit	N/A
Pfam	UHGV-0020321_50	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0020321_50	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0020321_50	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_51	phrog_36	50.9	0.00000000000003	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020321_51	UniRef90_UPI001C10AB33	61.6	0.00000000259	N/A	N/A
structural_annotation	UHGV-0020321_51	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_53	phrog_3136	152.9	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0020321_53	UniRef90_UPI001CBCD733	188.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0020321_53	97139.C824_00742	80.9	4.41e-17	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0020321_53	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0020321_53	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0020321_53	PF04266,MF_00684,NF003443,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020321_59	UniRef90_UPI001873F304	50.1	0.00000782	N/A	N/A
Pfam	UHGV-0020321_59	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0020321_59	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_61	phrog_374	80.0	3.78351e-44	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020321_61	UniRef90_UPI0006D56AE3	110.0	3.33e-26	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0020321_61	478749.BRYFOR_06584	122.0	1.15e-30	AP2 domain protein	N/A
structural_annotation	UHGV-0020321_61	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_62	phrog_1770	105.6	4.6e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020321_62	UniRef90_A0A7W1N8Z0	105.0	3.98e-26	Holliday junction endonuclease	N/A
eggNOG-mapper	UHGV-0020321_62	329726.AM1_4255	105.0	1.27e-26	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	N/A
COG	UHGV-0020321_62	COG0817	N/A	N/A	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	N/A
structural_annotation	UHGV-0020321_62	PF16921,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0020321_63	phrog_18079	55.9	2.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-0020321_63	645991.Sgly_0315	80.9	9.16e-16	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0020321_63	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A