UHGV-0020322 (vOTU-086518)

Viral Genome: UHGV-0020322

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0020322
vOTU ID	vOTU-086518
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_E_15_1726__NODE_2441_length_35783_cov_7.599843
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9795
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.14
Jumbo phage	No

Genome content
Genome length (bp)	35,783
GC content	56.96%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	92%
Average CDS length (bps)	601.20
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0020322_1	phrog_119	68.7	8.4e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020322_1	UniRef90_R7N7M6	119.0	1.33e-32	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0020322_1	411902.CLOBOL_03884	113.0	4.35e-31	HNH endonuclease	N/A
Pfam	UHGV-0020322_1	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0020322_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0020322_2	UniRef90_UPI001F232519	51.2	0.000000453	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0020322_2	742738.HMPREF9460_00868	63.2	0.0000000000015	Cysteine-rich KTR	N/A
Pfam	UHGV-0020322_2	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0020322_2	PF14205,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_3	phrog_3584	158.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020322_3	1203606.HMPREF1526_00985	168.0	0	N/A	N/A
structural_annotation	UHGV-0020322_3	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_4	phrog_21498	312.4	0	N/A	unknown function
UniRef90	UHGV-0020322_4	UniRef90_A0A3R6J122	226.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0020322_4	1121866.AUGK01000014_gene2036	223.0	0	DNA binding	N/A
COG	UHGV-0020322_4	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0020322_4	PF05869,TIGR01712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020322_5	PF21166	N/A	N/A	N/A	N/A
KOfam	UHGV-0020322_7	K03497	83.1	5.4e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0020322_7	phrog_27290	341.7	0	N/A	unknown function
UniRef90	UHGV-0020322_7	UniRef90_R5EBB0	353.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0020322_7	693746.OBV_19860	244.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0020322_7	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0020322_7	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0020322_7	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
KOfam	UHGV-0020322_8	K03496	179.9	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0020322_8	phrog_164	160.5	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020322_8	UniRef90_R5EEH2	229.0	0	CobQ/CobB/MinD/ParA nucleotide binding domain protein	N/A
eggNOG-mapper	UHGV-0020322_8	742738.HMPREF9460_00854	170.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0020322_8	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0020322_8	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0020322_8	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0020322_9	K02314	263.1	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0020322_9	phrog_19	213.9	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020322_9	UniRef90_A0A2N2CMR0	280.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0020322_9	693746.OBV_27440	245.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0020322_9	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0020322_9	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0020322_9	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0020322_9	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_10	phrog_4707	87.2	1.6e-25	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020322_10	411467.BACCAP_01805	157.0	1.4013e-43	COG NOG34358 non supervised orthologous group	N/A
Pfam	UHGV-0020322_10	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0020322_10	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0020322_10	PF19481,TIGR04176,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-0020322_17	K22300	51.1	0.000000000000029	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0020322_17	UniRef90_A0A1Y4L0A2	103.0	8.95e-26	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020322_17	411471.SUBVAR_05818	70.5	0.0000000000000832	sequence-specific DNA binding	N/A
Pfam	UHGV-0020322_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020322_17	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020322_17	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_18	phrog_4654	48.8	0.000000000000085	N/A	unknown function
UniRef90	UHGV-0020322_18	UniRef90_A0A374JQK3	140.0	1.82e-38	HIRAN domain-containing protein	N/A
eggNOG-mapper	UHGV-0020322_18	411471.SUBVAR_05817	113.0	4.32e-28	N/A	N/A
Pfam	UHGV-0020322_18	PF08797	N/A	N/A	HIRAN domain	HIRAN
structural_annotation	UHGV-0020322_18	PF08797	N/A	N/A	N/A	N/A
Pfam	UHGV-0020322_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
KOfam	UHGV-0020322_22	K06400	333.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0020322_22	phrog_95	330.6	0	integrase	integration and excision
UniRef90	UHGV-0020322_22	UniRef90_UPI00106696FE	375.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0020322_22	665956.HMPREF1032_03589	377.0	0	N/A	N/A
Pfam	UHGV-0020322_22	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0020322_22	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0020322_22	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0020322_22	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0020322_22	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020322_24	UniRef90_UPI00164AED9E	85.1	7.87e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0020322_24	1235798.C817_04600	72.8	0.0000000000000668	N/A	N/A
UniRef90	UHGV-0020322_26	UniRef90_A0A843GWV6	80.5	1.69e-17	Rubrerythrin domain-containing protein	N/A
structural_annotation	UHGV-0020322_27	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_28	phrog_16490	45.1	0.0000000000018	N/A	unknown function
KOfam	UHGV-0020322_31	K00571	66.4	5.1e-19	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0020322_31	phrog_67	67.0	3.5e-19	DNA methyltransferase	other
UniRef90	UHGV-0020322_31	UniRef90_A0A8D9PDC5	264.0	0	Adenine specific DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0020322_31	1378168.N510_02840	160.0	0	DNA methylase	N/A
PADLOC	UHGV-0020322_31	MTase_II_00172	129.6	2.7e-38	Type II methyltransferase	RM
Pfam	UHGV-0020322_31	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0020322_31	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0020322_31	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_33	phrog_1129	74.5	8.7e-22	holin	lysis
UniRef90	UHGV-0020322_33	UniRef90_A0A354UUQ2	149.0	2.8026e-45	Holin	N/A
eggNOG-mapper	UHGV-0020322_33	1256908.HMPREF0373_00463	84.3	3.6e-20	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0020322_33	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0020322_33	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020322_34	UniRef90_UPI001E4D989F	56.6	0.0000000409	CTP synthase	N/A
eggNOG-mapper	UHGV-0020322_34	1042156.CXIVA_01580	64.3	0.0000000000113	N/A	N/A
KOfam	UHGV-0020322_35	K08640	101.4	1.4e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0020322_35	phrog_894	62.3	7.9e-18	endolysin	lysis
UniRef90	UHGV-0020322_35	UniRef90_UPI001C12323B	148.0	1.35001e-41	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0020322_35	931626.Awo_c26840	111.0	5.38e-28	Peptidase M15	N/A
Pfam	UHGV-0020322_35	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0020322_35	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0020322_35	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020322_35	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
KOfam	UHGV-0020322_37	K03646	50.8	0.000000000000037	tolA; colicin import membrane protein	N/A
eggNOG-mapper	UHGV-0020322_37	877414.ATWA01000062_gene1616	83.2	0.0000000000000442	N/A	N/A
structural_annotation	UHGV-0020322_37	PF10651,NF033814	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020322_39	PF14686,PF21253,NF040788,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_40	phrog_38044	46.9	0.00000000000008	N/A	unknown function
eggNOG-mapper	UHGV-0020322_40	1123263.AUKY01000015_gene1622	61.6	0.0000000866	cellulase activity	N/A
COG	UHGV-0020322_40	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0020322_41	phrog_32744	164.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0020322_41	1120998.AUFC01000030_gene2247	95.9	1.6e-17	N/A	N/A
structural_annotation	UHGV-0020322_41	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020322_42	1120998.AUFC01000030_gene2246	76.3	0.00000000000000621	N/A	N/A
structural_annotation	UHGV-0020322_42	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_43	phrog_8462	169.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0020322_43	UniRef90_V9HUK2	241.0	0	Phage tail tape measure protein, TP901 family, core region	N/A
eggNOG-mapper	UHGV-0020322_43	1123263.AUKY01000046_gene477	290.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0020322_43	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0020322_43	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_44	phrog_3033	52.0	0.0000000000000081	N/A	unknown function
eggNOG-mapper	UHGV-0020322_44	1226322.HMPREF1545_00123	51.2	0.0000000945	N/A	N/A
PHROG	UHGV-0020322_45	phrog_709	90.3	1.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0020322_45	1235790.C805_00876	118.0	1.26e-32	N/A	N/A
structural_annotation	UHGV-0020322_45	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_46	phrog_88	126.4	1.8e-37	major tail protein	tail
UniRef90	UHGV-0020322_46	UniRef90_D1PND6	203.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0020322_46	411471.SUBVAR_05857	203.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0020322_46	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0020322_46	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020322_47	UniRef90_U2SBX3	75.1	0.00000000000000221	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020322_47	1226322.HMPREF1545_00120	75.1	3.7e-16	N/A	N/A
structural_annotation	UHGV-0020322_47	PF20765	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020322_48	UniRef90_A0A4R1R500	69.3	0.0000000000016	Bacteriophage HK97-gp10 putative tail-component	N/A
eggNOG-mapper	UHGV-0020322_48	1469948.JPNB01000001_gene696	69.3	0.000000000000269	N/A	N/A
Pfam	UHGV-0020322_48	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0020322_48	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_49	phrog_1951	84.5	8.6e-25	head-tail adaptor	connector
UniRef90	UHGV-0020322_49	UniRef90_A0A8J6P6R3	108.0	1.16e-28	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0020322_49	411471.SUBVAR_05854	104.0	5.11e-28	N/A	N/A
structural_annotation	UHGV-0020322_49	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_50	phrog_5223	50.1	0.000000000000035	neck protein	connector
UniRef90	UHGV-0020322_50	UniRef90_UPI00073F29ED	75.9	5.69e-16	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0020322_50	742740.HMPREF9474_04303	71.2	0.00000000000000661	N/A	N/A
PHROG	UHGV-0020322_51	phrog_10	117.0	2.1e-34	major head protein	head and packaging
UniRef90	UHGV-0020322_51	UniRef90_A0A8J6P3N1	316.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0020322_51	445975.COLSTE_02162	165.0	3.64338e-44	Phage capsid family	N/A
Pfam	UHGV-0020322_51	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0020322_51	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0020322_51	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0020322_51	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0020322_52	K06904	121.4	9e-36	N/A	N/A
PHROG	UHGV-0020322_52	phrog_80	137.5	1.3e-40	head maturation protease	head and packaging
UniRef90	UHGV-0020322_52	UniRef90_A0A3D1WQ94	242.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0020322_52	742740.HMPREF9474_04305	237.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0020322_52	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0020322_52	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0020322_52	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0020322_52	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_53	phrog_12	95.2	5.8e-28	portal protein	head and packaging
UniRef90	UHGV-0020322_53	UniRef90_UPI00073E8ED5	404.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0020322_53	411471.SUBVAR_05850	401.0	0	Phage portal protein	N/A
Pfam	UHGV-0020322_53	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0020322_53	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0020322_53	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_54	phrog_9	329.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0020322_54	UniRef90_UPI00195E1FF2	699.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0020322_54	411471.SUBVAR_05848	688.0	0	large subunit	N/A
Pfam	UHGV-0020322_54	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0020322_54	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0020322_54	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0020322_54	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0020322_55	phrog_13845	44.9	0.0000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0020322_55	1399942.U3PDR2_9CAUD	55.1	0.0000000448	N/A	N/A
structural_annotation	UHGV-0020322_55	PF05119,COG3747	N/A	N/A	N/A	N/A