UHGV-0020325 (vOTU-128891)

Viral Genome: UHGV-0020325

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0020325
vOTU ID	vOTU-128891
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_E_15_1726__NODE_2659_length_33832_cov_9.490712
Associated BioSample	SAMEA4766006
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.55 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.68
Jumbo phage	No

Genome content
Genome length (bp)	33,832
GC content	52.06%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	93%
Average CDS length (bps)	554.58
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0020325_5	phrog_3240	72.5	6.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0020325_5	320841.Q4ZC34_9CAUD	55.5	0.00000000281	N/A	N/A
UniRef90	UHGV-0020325_7	UniRef90_A0A1Q6RKG1	150.0	1.4013e-44	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020325_7	748224.HMPREF9436_01444	98.6	8e-25	N/A	N/A
Pfam	UHGV-0020325_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020325_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020325_7	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020325_9	290402.Cbei_1674	72.0	0.0000000000000564	N/A	N/A
COG	UHGV-0020325_10	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0020325_10	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0020325_11	K14059	89.4	5.7e-26	int; integrase	N/A
PHROG	UHGV-0020325_11	phrog_1	109.3	4.5e-32	integrase	integration and excision
UniRef90	UHGV-0020325_11	UniRef90_UPI000F051A1D	475.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0020325_11	693746.OBV_43340	432.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0020325_11	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0020325_11	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0020325_11	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020325_12	UniRef90_A0A8F0WD75	75.9	0.0000000000000863	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0020325_12	1378168.N510_03079	107.0	7.58e-26	N/A	N/A
eggNOG-mapper	UHGV-0020325_13	1408437.JNJN01000043_gene802	151.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0020325_14	phrog_16490	113.8	1.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-0020325_14	1408437.JNJN01000043_gene803	178.0	0	N/A	N/A
eggNOG-mapper	UHGV-0020325_16	445972.ANACOL_01878	65.9	0.00000000000709	N/A	N/A
UniRef90	UHGV-0020325_17	UniRef90_A0A8D9PDT6	67.8	0.000000000000353	Transcriptional regulatory protein	N/A
PHROG	UHGV-0020325_19	phrog_1129	62.1	6.9e-18	holin	lysis
UniRef90	UHGV-0020325_19	UniRef90_R6H6W8	115.0	8.97e-32	Putative holin	N/A
eggNOG-mapper	UHGV-0020325_19	1226322.HMPREF1545_00069	112.0	2.8e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0020325_19	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0020325_19	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_20	phrog_937	42.3	0.000000000013	hemolysin	other
eggNOG-mapper	UHGV-0020325_20	1519439.JPJG01000023_gene533	70.1	0.0000000000000159	N/A	N/A
PHROG	UHGV-0020325_21	phrog_9589	106.7	2.3e-31	endolysin	lysis
UniRef90	UHGV-0020325_21	UniRef90_H1CBS8	253.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0020325_21	1123075.AUDP01000020_gene1533	134.0	2.29e-31	pathogenesis	N/A
Pfam	UHGV-0020325_21	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0020325_21	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0020325_21	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-0020325_21	PF18013,PF01471,COG3409	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020325_22	PF21582,NF038128	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020325_26	UniRef90_A0A8D9PDX6	67.0	0.00000000000156	Zinc-finger double domain protein	N/A
structural_annotation	UHGV-0020325_26	PF07238	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020325_27	1235797.C816_04179	82.4	0.0000000000000287	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0020325_27	NF041249,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020325_28	UniRef90_A0A2Z4QA17	95.9	4.29e-20	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0020325_28	1235797.C816_04180	103.0	1.28e-23	N/A	N/A
structural_annotation	UHGV-0020325_28	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_29	phrog_1194	58.1	1.6e-16	N/A	unknown function
structural_annotation	UHGV-0020325_29	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_30	phrog_1535	77.4	6.5e-37	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0020325_30	1158606.I579_02100	67.8	0.00000000452	Phage tail tape measure protein	N/A
COG	UHGV-0020325_30	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0020325_30	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_31	phrog_706	124.3	8.4e-37	N/A	unknown function
UniRef90	UHGV-0020325_31	UniRef90_UPI000682A80B	199.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0020325_31	693746.OBV_18170	182.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0020325_31	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0020325_31	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_32	phrog_11299	49.0	0.00000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0020325_32	693746.OBV_18160	146.0	3.11088e-43	N/A	N/A
structural_annotation	UHGV-0020325_32	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_33	phrog_3099	75.6	7.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0020325_33	1232443.BAIA02000078_gene23	211.0	0	N/A	N/A
structural_annotation	UHGV-0020325_33	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_34	phrog_3266	42.7	0.0000000000073	tail completion	connector
eggNOG-mapper	UHGV-0020325_34	1232443.BAIA02000078_gene24	115.0	4.56e-31	N/A	N/A
structural_annotation	UHGV-0020325_34	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_35	phrog_556	52.0	0.00000000000001	minor head protein	head and packaging
UniRef90	UHGV-0020325_35	UniRef90_A0A1C5N8K8	105.0	2.89e-26	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0020325_35	1226322.HMPREF1545_00054	105.0	2.56e-27	Minor capsid protein	N/A
Pfam	UHGV-0020325_35	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0020325_35	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_36	phrog_3366	110.2	1.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-0020325_36	1226322.HMPREF1545_00053	118.0	3.26e-32	N/A	N/A
Pfam	UHGV-0020325_36	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0020325_36	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_37	phrog_541	107.8	6.6e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0020325_37	1120998.AUFC01000030_gene2237	73.6	0.00000000000000388	N/A	N/A
PHROG	UHGV-0020325_38	phrog_544	138.0	4.90006e-41	major head protein	head and packaging
UniRef90	UHGV-0020325_38	UniRef90_A0A1C6B5R0	585.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0020325_38	1232453.BAIF02000011_gene3359	390.0	0	N/A	N/A
Pfam	UHGV-0020325_38	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0020325_38	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_39	phrog_2303	59.0	4.7e-17	head scaffolding protein	head and packaging
UniRef90	UHGV-0020325_39	UniRef90_UPI001F3D247A	67.8	0.000000000111	N/A	N/A
eggNOG-mapper	UHGV-0020325_39	1226322.HMPREF1545_00049	82.0	4.04e-17	N/A	N/A
structural_annotation	UHGV-0020325_39	PF14265	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020325_41	UniRef90_A0A847E3M6	52.4	0.0000000498	Ribbon-helix-helix protein, CopG family	N/A
Pfam	UHGV-0020325_41	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
COG	UHGV-0020325_41	COG4877	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020325_41	PF03869,NF010256,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_43	phrog_581	271.0	0	minor head protein	head and packaging
UniRef90	UHGV-0020325_43	UniRef90_A0A417HAG8	337.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0020325_43	903814.ELI_3213	254.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0020325_43	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0020325_43	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020325_43	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_44	phrog_533	386.0	0	portal protein	head and packaging
UniRef90	UHGV-0020325_44	UniRef90_UPI001D078D46	515.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0020325_44	1226322.HMPREF1545_00044	508.0	0	N/A	N/A
Pfam	UHGV-0020325_44	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0020325_44	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0020325_45	K06909	389.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0020325_45	phrog_3717	149.5	1.54143e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0020325_45	UniRef90_A0A6L8SYJ6	626.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0020325_45	33035.JPJF01000106_gene3136	488.0	0	Terminase small subunit	N/A
Pfam	UHGV-0020325_45	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0020325_45	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0020325_45	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0020325_45	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0020325_45	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_46	phrog_9479	128.4	4.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-0020325_46	1514668.JOOA01000002_gene2680	52.0	0.000000998	N/A	N/A
structural_annotation	UHGV-0020325_46	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_48	phrog_940	299.9	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020325_48	UniRef90_R5YPA6	404.0	0	ParB-like protein	N/A
eggNOG-mapper	UHGV-0020325_48	936154.STP_1604	300.0	0	N/A	N/A
PADLOC	UHGV-0020325_48	MTase_II_00015	75.7	8.5e-22	Type II methyltransferase	RM
Pfam	UHGV-0020325_48	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0020325_48	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0020325_48	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0020325_48	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020325_49	1297617.JPJD01000059_gene2640	116.0	9.89e-32	N/A	N/A
structural_annotation	UHGV-0020325_49	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_53	phrog_190	122.6	2.8e-36	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020325_53	UniRef90_A0A843JAF3	106.0	1.31e-27	N/A	N/A
eggNOG-mapper	UHGV-0020325_53	467481.B0VK09_9CAUD	95.5	8.68e-24	N/A	N/A
Pfam	UHGV-0020325_53	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0020325_53	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0020325_54	phrog_18716	167.8	0	N/A	unknown function
UniRef90	UHGV-0020325_54	UniRef90_A0A268IIR4	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-0020325_54	665959.HMPREF1013_00856	160.0	0	N/A	N/A
Pfam	UHGV-0020325_54	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
PHROG	UHGV-0020325_57	phrog_27197	43.1	0.0000000000071	N/A	unknown function
eggNOG-mapper	UHGV-0020325_57	886882.PPSC2_p0363	65.9	0.0000000000411	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0020325_57	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0020325_57	NF007410	N/A	N/A	N/A	N/A