Viral Genome: UHGV-0020342


Overview
UHGV ID UHGV-0020342
vOTU ID vOTU-105584
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_MoBio_hadza-E-H_A_15_1703__NODE_1679_length_41334_cov_14.346220
Associated BioSample SAMEA4765983
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 84.51 (Medium-quality)
Trimmed provirus No
CheckV viral markers 14
CheckV host markers 0
Recoded stop codon No
Viral Content
geNomad score 0.9823
Virus hallmark genes (geNomad) 7
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 45.78
Jumbo phage No

Genome content
Genome length (bp) 41,334
GC content 54.56%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 71
CDS density 90%
Average CDS length (bps) 522.34
Total tRNA genes 0
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 84.51)
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