UHGV-0021197 (vOTU-128435)

Viral Genome: UHGV-0021197

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0021197
vOTU ID	vOTU-128435
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_D_18_2193__NODE_1473_length_37371_cov_4.554566
Associated BioSample	SAMEA4766188
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.79 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9721
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.82
Jumbo phage	No

Genome content
Genome length (bp)	37,371
GC content	41.17%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	45
CDS density	89%
Average CDS length (bps)	743.20
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0021197_1	phrog_2152	167.6	0	N/A	unknown function
UniRef90	UHGV-0021197_1	UniRef90_UPI0018AC0B4C	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-0021197_1	411460.RUMTOR_02024	173.0	0	N/A	N/A
Pfam	UHGV-0021197_1	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0021197_1	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_4	phrog_2152	194.9	0	N/A	unknown function
UniRef90	UHGV-0021197_4	UniRef90_UPI001D065195	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-0021197_4	411460.RUMTOR_02024	165.0	0	N/A	N/A
Pfam	UHGV-0021197_4	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0021197_4	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_10	phrog_17256	192.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0021197_10	665950.HMPREF1025_01937	171.0	0	N/A	N/A
UniRef90	UHGV-0021197_11	UniRef90_A0A8I1IYV6	152.0	1.08e-39	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0021197_11	658655.HMPREF0988_02357	135.0	6.15e-35	N/A	N/A
Pfam	UHGV-0021197_11	PF20234	N/A	N/A	N/A	DUF6591
PHROG	UHGV-0021197_12	phrog_15866	46.0	0.00000000000066	N/A	unknown function
PHROG	UHGV-0021197_14	phrog_11237	158.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0021197_14	411460.RUMTOR_02009	148.0	4.90454e-44	N/A	N/A
KOfam	UHGV-0021197_15	K04763	193.4	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0021197_15	phrog_1	172.1	0	integrase	integration and excision
UniRef90	UHGV-0021197_15	UniRef90_UPI001C0284B4	416.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0021197_15	536232.CLM_2087	328.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0021197_15	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0021197_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0021197_15	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0021197_15	PF00589,PF02899,MF_01808,TIGR02225,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_16	phrog_881	82.4	2.8e-24	holin	lysis
UniRef90	UHGV-0021197_16	UniRef90_UPI001D0692FC	108.0	9.64e-30	phage holin	N/A
eggNOG-mapper	UHGV-0021197_16	742740.HMPREF9474_02251	114.0	1.09e-32	Putative phage holin Dp-1	N/A
Pfam	UHGV-0021197_16	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0021197_16	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_17	phrog_4105	100.1	1.2e-29	N/A	unknown function
UniRef90	UHGV-0021197_17	UniRef90_A0A8D9UHA9	120.0	2.98e-33	Holin protein	N/A
eggNOG-mapper	UHGV-0021197_17	411460.RUMTOR_01326	143.0	2.98477e-43	N/A	N/A
PHROG	UHGV-0021197_19	phrog_20016	71.7	7.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0021197_19	476272.RUMHYD_01956	53.9	0.000000367	N/A	N/A
structural_annotation	UHGV-0021197_19	PF00386,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_20	phrog_16490	97.6	3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0021197_20	397290.C810_01328	103.0	2.92e-23	N/A	N/A
eggNOG-mapper	UHGV-0021197_22	397290.C810_01326	52.8	0.00000116	N/A	N/A
PHROG	UHGV-0021197_24	phrog_1067	78.7	1.8e-23	minor head protein	head and packaging
eggNOG-mapper	UHGV-0021197_24	1123263.AUKY01000068_gene489	78.2	0.00000000000212	Phage minor structural protein	N/A
Pfam	UHGV-0021197_24	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0021197_24	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0021197_24	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0021197_25	phrog_33	59.9	6.4e-17	distal tail protein Dit	tail
UniRef90	UHGV-0021197_25	UniRef90_A0A173Z1X4	181.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0021197_25	1123263.AUKY01000068_gene490	91.7	2.33e-19	tail component	N/A
COG	UHGV-0021197_25	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0021197_25	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_26	phrog_4372	382.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0021197_26	UniRef90_A0A3A9ITG5	772.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0021197_26	428125.CLOLEP_01422	433.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0021197_26	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0021197_26	COG5412	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-0021197_27	UniRef90_A0A373NV95	151.0	7.00649e-45	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0021197_27	742740.HMPREF9474_02263	145.0	1.49939e-43	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0021197_27	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0021197_27	TIGR01725	N/A	N/A	N/A	N/A
KOfam	UHGV-0021197_28	K19304	126.0	3.7e-37	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0021197_28	phrog_10030	96.4	1.2e-28	tail length tape measure protein	tail
UniRef90	UHGV-0021197_28	UniRef90_A0A3D1PRD1	269.0	0	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021197_28	1449345.JHWC01000015_gene668	102.0	2.22e-23	peptidase M23	N/A
Pfam	UHGV-0021197_28	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0021197_28	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0021197_28	PF01551,NF040883	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_29	phrog_4338	200.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0021197_29	1537917.JU82_06570	154.0	2.8026e-45	N/A	N/A
PHROG	UHGV-0021197_30	phrog_4282	137.4	6.89999e-41	N/A	unknown function
eggNOG-mapper	UHGV-0021197_30	428125.CLOLEP_01416	111.0	1.06e-29	N/A	N/A
PHROG	UHGV-0021197_31	phrog_2645	326.6	0	major tail protein	tail
UniRef90	UHGV-0021197_31	UniRef90_A0A644ZQB8	264.0	0	Big_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021197_31	742740.HMPREF9474_02267	256.0	0	N/A	N/A
structural_annotation	UHGV-0021197_31	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_32	phrog_78	49.8	0.000000000000062	tail terminator	connector
UniRef90	UHGV-0021197_32	UniRef90_A0A6M3SX82	96.3	7.91e-24	Tail terminator	N/A
eggNOG-mapper	UHGV-0021197_32	691965.D4P7D8_9CAUD	94.4	8.76e-24	N/A	N/A
structural_annotation	UHGV-0021197_32	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_33	phrog_4270	132.7	8.99999e-40	N/A	unknown function
eggNOG-mapper	UHGV-0021197_33	742733.HMPREF9469_05028	132.0	8.66e-39	N/A	N/A
structural_annotation	UHGV-0021197_33	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-0021197_34	K06904	67.7	1.4e-19	N/A	N/A
PHROG	UHGV-0021197_34	phrog_3270	722.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0021197_34	UniRef90_D4N0R6	596.0	0	Phage capsid family./Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0021197_34	428125.CLOLEP_01412	454.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0021197_34	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
Pfam	UHGV-0021197_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0021197_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0021197_34	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_35	phrog_12	120.7	1e-35	portal protein	head and packaging
UniRef90	UHGV-0021197_35	UniRef90_A0A174YU68	560.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0021197_35	411460.RUMTOR_01348	582.0	0	Phage portal protein	N/A
Pfam	UHGV-0021197_35	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0021197_35	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_36	phrog_9151	72.6	3.1e-21	HicB-like antitoxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0021197_36	UniRef90_A0A353EYT4	76.6	8.46e-16	Toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-0021197_36	1392502.JNIO01000008_gene1606	72.0	0.0000000000000114	protein encoded in hypervariable junctions of pilus gene clusters	N/A
COG	UHGV-0021197_36	COG4226	N/A	N/A	Predicted nuclease of the RNAse H fold, HicB family	N/A
structural_annotation	UHGV-0021197_36	PF21748,COG4226	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_37	phrog_11419	111.8	8.1e-34	tail fiber protein	tail
eggNOG-mapper	UHGV-0021197_37	1540090.A0A0A0RS40_9CAUD	65.9	0.0000000329	N/A	N/A
PHROG	UHGV-0021197_38	phrog_19695	72.9	6.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-0021197_38	411462.DORLON_00772	65.5	0.00000000000145	N/A	N/A
structural_annotation	UHGV-0021197_38	PF19714	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_39	phrog_9	248.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0021197_39	UniRef90_UPI001D05F004	958.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0021197_39	665956.HMPREF1032_00672	949.0	0	Phage Terminase	N/A
Pfam	UHGV-0021197_39	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0021197_39	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0021197_39	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0021197_40	phrog_7021	53.3	0.0000000000000037	N/A	unknown function
eggNOG-mapper	UHGV-0021197_40	665956.HMPREF1032_00671	59.3	0.00000000297	N/A	N/A
PHROG	UHGV-0021197_41	phrog_4247	158.2	0	virion structural protein	head and packaging
UniRef90	UHGV-0021197_41	UniRef90_D4P7C3	129.0	1.75e-36	Structural protein	N/A
eggNOG-mapper	UHGV-0021197_41	428125.CLOLEP_01407	147.0	1.82169e-44	N/A	N/A
PHROG	UHGV-0021197_42	phrog_4321	197.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0021197_42	411460.RUMTOR_01352	182.0	0	N/A	N/A
PHROG	UHGV-0021197_43	phrog_4259	115.0	2.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-0021197_43	742733.HMPREF9469_05037	95.5	4.3e-24	N/A	N/A
PHROG	UHGV-0021197_44	phrog_4303	96.7	1.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0021197_44	478749.BRYFOR_08533	87.4	2.63e-21	N/A	N/A
PHROG	UHGV-0021197_45	phrog_4291	520.1	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021197_45	UniRef90_A0A7C6Y9R1	388.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0021197_45	665956.HMPREF1032_00665	484.0	0	Bacterial regulatory proteins, luxR family	N/A
Pfam	UHGV-0021197_45	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
structural_annotation	UHGV-0021197_45	PF00623,PF02796	N/A	N/A	N/A	N/A