UHGV-0021597 (vOTU-119629)

Viral Genome: UHGV-0021597

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0021597
vOTU ID	vOTU-119629
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_A_21_1706__NODE_1886_length_36309_cov_73.697588
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.14 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9794
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	9.97
Jumbo phage	No

Genome content
Genome length (bp)	36,309
GC content	52.41%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	61
CDS density	91%
Average CDS length (bps)	539.41
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0021597_1	phrog_119	56.4	3.9e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021597_1	UniRef90_A0A2A7B6I3	232.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0021597_1	610130.Closa_0739	107.0	1.8e-28	HNH nucleases	N/A
Pfam	UHGV-0021597_1	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0021597_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0021597_2	phrog_21498	300.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0021597_2	78346.BRUM_0376	275.0	0	DNA binding	N/A
COG	UHGV-0021597_2	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0021597_2	PF05869,TIGR01712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021597_7	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0021597_8	K03497	90.9	2.2e-26	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0021597_8	phrog_4715	123.5	1.4e-36	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021597_8	UniRef90_A0A2A7AMC5	285.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0021597_8	411471.SUBVAR_05842	184.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0021597_8	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0021597_8	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0021597_8	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021597_9	UniRef90_A0A355JDC2	101.0	2.29e-24	N/A	N/A
KOfam	UHGV-0021597_10	K03496	207.9	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0021597_10	phrog_164	157.2	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021597_10	UniRef90_A0A2A7B6H3	361.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021597_10	411471.SUBVAR_05839	229.0	0	AAA domain	N/A
Pfam	UHGV-0021597_10	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0021597_10	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0021597_10	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_12	phrog_6969	58.0	1.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0021597_12	748224.HMPREF9436_00735	156.0	3.19496e-43	N/A	N/A
Pfam	UHGV-0021597_12	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-0021597_12	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0021597_12	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0021597_12	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0021597_13	K03111	143.0	2.79979e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0021597_13	phrog_44	152.5	1.4013e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021597_13	UniRef90_A0A2A7ALU9	193.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0021597_13	748224.HMPREF9436_00638	198.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0021597_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0021597_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0021597_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0021597_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0021597_13	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_14	phrog_7566	84.8	6.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-0021597_14	411471.SUBVAR_05830	103.0	1.3e-27	N/A	N/A
PHROG	UHGV-0021597_16	phrog_72	47.8	0.00000000000023	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0021597_16	411471.SUBVAR_05829	134.0	2.36e-37	N/A	N/A
structural_annotation	UHGV-0021597_16	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_17	phrog_14970	44.2	0.0000000000032	N/A	unknown function
COG	UHGV-0021597_17	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0021597_17	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021597_20	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021597_26	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021597_27	UniRef90_A0A2A7AM72	154.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0021597_27	1378168.N510_01712	76.6	0.0000000000000019	N/A	N/A
structural_annotation	UHGV-0021597_27	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021597_28	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021597_31	394503.Ccel_2974	58.9	0.000000374	N/A	N/A
structural_annotation	UHGV-0021597_31	PF06776,COG5342	N/A	N/A	N/A	N/A
KOfam	UHGV-0021597_35	K07729	40.2	0.000000000026	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0021597_35	phrog_1373	44.9	0.00000000000078	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021597_35	UniRef90_A0A2A7AM70	186.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0021597_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021597_35	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0021597_35	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0021597_36	K14059	178.8	0	int; integrase	N/A
PHROG	UHGV-0021597_36	phrog_1	166.5	0	integrase	integration and excision
UniRef90	UHGV-0021597_36	UniRef90_A0A367GI93	223.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0021597_36	1507.HMPREF0262_00307	162.0	1.30321e-43	Phage integrase family	N/A
Pfam	UHGV-0021597_36	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0021597_36	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0021597_36	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021597_37	1408437.JNJN01000043_gene801	97.8	1.62e-22	N/A	N/A
eggNOG-mapper	UHGV-0021597_38	1408437.JNJN01000043_gene802	122.0	1.58e-34	N/A	N/A
PHROG	UHGV-0021597_39	phrog_16490	104.9	2.5e-40	N/A	unknown function
eggNOG-mapper	UHGV-0021597_39	1408437.JNJN01000043_gene803	157.0	3.36312e-44	N/A	N/A
UniRef90	UHGV-0021597_42	UniRef90_A0A1Y3R5J8	51.2	0.000000322	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021597_42	1160721.RBI_I00206	60.8	0.00000000000882	N/A	N/A
Pfam	UHGV-0021597_42	PF09274	N/A	N/A	ParG	ParG
structural_annotation	UHGV-0021597_42	PF10723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021597_44	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_46	phrog_15303	87.0	1.4e-25	N/A	unknown function
PHROG	UHGV-0021597_47	phrog_1863	76.6	1.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0021597_47	718252.FP2_04900	145.0	1.82169e-44	N/A	N/A
KOfam	UHGV-0021597_48	K07273	164.1	0	acm; lysozyme	N/A
PHROG	UHGV-0021597_48	phrog_291	127.9	8.9e-38	endolysin	lysis
UniRef90	UHGV-0021597_48	UniRef90_UPI001D0EE7D8	308.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0021597_48	748224.HMPREF9436_00154	283.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0021597_48	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0021597_48	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0021597_48	PF01183,COG3757	N/A	N/A	N/A	N/A
Pfam	UHGV-0021597_49	PF12708	N/A	N/A	Pectate lyase superfamily protein	Pectate_lyase_3
PHROG	UHGV-0021597_51	phrog_1067	174.9	0	minor head protein	head and packaging
UniRef90	UHGV-0021597_51	UniRef90_A0A2A7AM44	706.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0021597_51	1123263.AUKY01000068_gene489	194.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0021597_51	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0021597_51	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0021597_51	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0021597_51	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_52	phrog_33	78.1	1.8e-22	distal tail protein Dit	tail
UniRef90	UHGV-0021597_52	UniRef90_A0A173Z1X4	140.0	1.53e-37	Phage-related protein	N/A
eggNOG-mapper	UHGV-0021597_52	1487921.DP68_11370	86.3	1.39e-17	tail component	N/A
NCBIFam	UHGV-0021597_52	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0021597_52	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0021597_52	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_53	phrog_9959	98.2	4.4e-29	tail length tape measure protein	tail
UniRef90	UHGV-0021597_53	UniRef90_A0A2A7ALS3	751.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021597_53	596328.HMPREF0578_1241	191.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0021597_53	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0021597_53	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0021597_53	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0021597_53	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_56	phrog_88	93.2	2.6e-27	major tail protein	tail
UniRef90	UHGV-0021597_56	UniRef90_G9YSC5	107.0	8.91e-26	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0021597_56	33035.JPJF01000039_gene278	73.6	0.000000000000201	N/A	N/A
NCBIFam	UHGV-0021597_56	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0021597_56	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_57	phrog_5	49.5	0.000000000000067	tail completion or Neck1 protein	connector
UniRef90	UHGV-0021597_57	UniRef90_A0A1C6FG30	134.0	6.41e-37	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0021597_57	908340.HMPREF9406_2573	118.0	1.39e-31	N/A	N/A
structural_annotation	UHGV-0021597_57	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021597_58	999413.HMPREF1094_02005	70.1	0.0000000000000354	N/A	N/A
structural_annotation	UHGV-0021597_58	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_59	phrog_19734	93.5	1.8e-27	N/A	unknown function
UniRef90	UHGV-0021597_59	UniRef90_A0A0D8I708	81.6	2.51e-17	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0021597_59	349161.Dred_2602	75.9	7.34e-16	N/A	N/A
structural_annotation	UHGV-0021597_59	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0021597_60	phrog_749	55.1	0.000000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0021597_60	1211817.CCAT010000053_gene2133	63.5	0.0000000000123	N/A	N/A
PHROG	UHGV-0021597_61	phrog_10	124.3	6.4e-37	major head protein	head and packaging
UniRef90	UHGV-0021597_61	UniRef90_A0A2A7B712	705.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0021597_61	1235792.C808_00086	440.0	0	Phage capsid family	N/A
Pfam	UHGV-0021597_61	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0021597_61	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0021597_61	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0021597_61	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0021597_61	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A