UHGV-0021981 (vOTU-169852)

Viral Genome: UHGV-0021981

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0021981
vOTU ID	vOTU-169852
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_H_14_2281__NODE_719_length_36078_cov_92.176440
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	88.69 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9789
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	14.34
Jumbo phage	No

Genome content
Genome length (bp)	36,078
GC content	52.65%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	58
CDS density	91%
Average CDS length (bps)	567.31
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88.69)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0021981_3	phrog_1067	171.5	0	minor head protein	head and packaging
UniRef90	UHGV-0021981_3	UniRef90_A0A2A7AM44	702.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0021981_3	1123263.AUKY01000068_gene489	189.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0021981_3	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0021981_3	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0021981_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0021981_3	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_4	phrog_33	80.2	4.1e-23	distal tail protein Dit	tail
UniRef90	UHGV-0021981_4	UniRef90_A0A173Z1X4	145.0	1.24e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-0021981_4	748727.CLJU_c03670	97.4	8.81e-22	tail component	N/A
NCBIFam	UHGV-0021981_4	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0021981_4	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0021981_4	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_5	phrog_9959	88.5	3.8e-26	tail length tape measure protein	tail
UniRef90	UHGV-0021981_5	UniRef90_A0A2A7ALS3	809.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021981_5	1492737.FEM08_12070	157.0	1.76e-37	tape measure	N/A
Pfam	UHGV-0021981_5	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0021981_5	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0021981_5	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0021981_5	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_8	phrog_88	95.3	6.1e-28	major tail protein	tail
UniRef90	UHGV-0021981_8	UniRef90_G9YSC5	113.0	5.19e-28	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0021981_8	349161.Dred_2600	65.9	0.000000000282	N/A	N/A
NCBIFam	UHGV-0021981_8	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0021981_8	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_9	phrog_5	49.5	0.000000000000073	tail completion or Neck1 protein	connector
UniRef90	UHGV-0021981_9	UniRef90_A0A1C6FG30	132.0	5.17e-36	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0021981_9	908340.HMPREF9406_2573	110.0	1.42e-28	N/A	N/A
NCBIFam	UHGV-0021981_9	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0021981_9	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021981_10	999413.HMPREF1094_02005	70.5	0.000000000000025	N/A	N/A
structural_annotation	UHGV-0021981_10	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_11	phrog_19734	87.4	1.5e-25	N/A	unknown function
UniRef90	UHGV-0021981_11	UniRef90_A0A0D8I708	77.8	7.5e-16	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0021981_11	349161.Dred_2602	72.0	0.0000000000000217	N/A	N/A
structural_annotation	UHGV-0021981_11	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_12	phrog_749	52.3	0.0000000000000089	N/A	unknown function
UniRef90	UHGV-0021981_12	UniRef90_UPI00099504CB	52.0	0.00000205	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0021981_12	1211817.CCAT010000053_gene2133	65.9	0.0000000000014	N/A	N/A
PHROG	UHGV-0021981_13	phrog_10	158.4	0	major head protein	head and packaging
UniRef90	UHGV-0021981_13	UniRef90_A0A2A7B712	599.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0021981_13	1235792.C808_00086	441.0	0	Phage capsid family	N/A
Pfam	UHGV-0021981_13	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0021981_13	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0021981_13	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0021981_13	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0021981_13	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0021981_14	K01358	90.8	1.8e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0021981_14	phrog_94	135.6	5.1e-40	head maturation protease	head and packaging
UniRef90	UHGV-0021981_14	UniRef90_UPI001C10F40E	162.0	1.4013e-45	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0021981_14	1232452.BAIB02000007_gene1626	153.0	1.96182e-43	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0021981_14	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0021981_14	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0021981_14	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_15	phrog_12	112.1	3.9e-33	portal protein	head and packaging
UniRef90	UHGV-0021981_15	UniRef90_A0A2A7AM75	465.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0021981_15	349161.Dred_2606	248.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0021981_15	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0021981_15	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0021981_15	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0021981_15	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_16	phrog_9	240.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0021981_16	UniRef90_A0A2A7ALT4	1062.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0021981_16	610130.Closa_0741	638.0	0	Phage Terminase	N/A
Pfam	UHGV-0021981_16	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0021981_16	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0021981_16	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_17	phrog_13845	55.4	7.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0021981_17	1399942.U3PDR2_9CAUD	67.0	0.00000000000113	N/A	N/A
structural_annotation	UHGV-0021981_17	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_18	phrog_119	58.2	1.2e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021981_18	UniRef90_A0A2A7B6I3	228.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0021981_18	610130.Closa_0739	110.0	1.1e-29	HNH nucleases	N/A
Pfam	UHGV-0021981_18	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0021981_18	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0021981_24	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0021981_25	K03497	88.1	1.7e-25	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0021981_25	phrog_4715	114.5	6.9e-34	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021981_25	UniRef90_A0A2A7AMC5	286.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0021981_25	411471.SUBVAR_05842	180.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0021981_25	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0021981_25	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0021981_25	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021981_26	UniRef90_A0A845R8R0	100.0	2.64e-24	N/A	N/A
KOfam	UHGV-0021981_27	K03496	207.7	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0021981_27	phrog_164	155.8	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021981_27	UniRef90_A0A2A7B6H3	352.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021981_27	411471.SUBVAR_05839	225.0	0	AAA domain	N/A
Pfam	UHGV-0021981_27	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0021981_27	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0021981_27	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_29	phrog_6969	57.8	1.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0021981_29	748224.HMPREF9436_00735	155.0	1.24996e-42	N/A	N/A
Pfam	UHGV-0021981_29	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-0021981_29	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0021981_29	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0021981_29	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0021981_30	K03111	148.6	5.74532e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0021981_30	phrog_44	151.9	2.8026e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021981_30	UniRef90_A0A2A7ALU9	202.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0021981_30	748224.HMPREF9436_00638	213.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0021981_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0021981_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0021981_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0021981_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0021981_30	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_31	phrog_7566	86.7	1.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0021981_31	411471.SUBVAR_05830	107.0	5.55e-29	N/A	N/A
PHROG	UHGV-0021981_33	phrog_72	48.0	0.00000000000021	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0021981_33	411471.SUBVAR_05829	139.0	2.58e-39	N/A	N/A
structural_annotation	UHGV-0021981_33	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_34	phrog_14970	44.7	0.0000000000022	N/A	unknown function
COG	UHGV-0021981_34	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0021981_34	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
Pfam	UHGV-0021981_40	PF00130	N/A	N/A	Phorbol esters/diacylglycerol binding domain (C1 domain)	C1_1
structural_annotation	UHGV-0021981_43	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021981_44	UniRef90_A0A2A7AM72	155.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0021981_44	1378168.N510_01712	77.8	6.95e-16	N/A	N/A
structural_annotation	UHGV-0021981_44	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021981_45	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021981_48	394503.Ccel_2974	56.2	0.00000297	N/A	N/A
structural_annotation	UHGV-0021981_48	PF06776,COG5342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021981_49	PF06776,COG5342	N/A	N/A	N/A	N/A
PHROG	UHGV-0021981_52	phrog_1373	44.1	0.0000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021981_52	UniRef90_A0A2A7B6N3	179.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0021981_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021981_52	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0021981_52	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0021981_53	K14059	175.9	0	int; integrase	N/A
PHROG	UHGV-0021981_53	phrog_1	160.6	0	integrase	integration and excision
UniRef90	UHGV-0021981_53	UniRef90_A0A367GI93	223.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0021981_53	1507.HMPREF0262_00307	161.0	3.54529e-43	Phage integrase family	N/A
Pfam	UHGV-0021981_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0021981_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0021981_53	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021981_54	1408437.JNJN01000043_gene801	99.0	5.85e-23	N/A	N/A
eggNOG-mapper	UHGV-0021981_55	1408437.JNJN01000043_gene802	120.0	9.09e-34	N/A	N/A
PHROG	UHGV-0021981_56	phrog_16490	149.9	1.54143e-44	N/A	unknown function
eggNOG-mapper	UHGV-0021981_56	1408437.JNJN01000043_gene803	183.0	0	N/A	N/A