UHGV-0022545 (vOTU-077299)

Viral Genome: UHGV-0022545

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0022545
vOTU ID	vOTU-077299
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_K_17_1778__NODE_2153_length_42838_cov_16.116134
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9788
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.11
Jumbo phage	No

Genome content
Genome length (bp)	42,838
GC content	38.52%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	73
CDS density	92%
Average CDS length (bps)	539.55
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0022545_1	PF02915	N/A	N/A	Rubrerythrin	Rubrerythrin
KOfam	UHGV-0022545_2	K24358	46.5	0.00000000000045	COL26A, EMID2; collagen type XXVI alpha (EMI domain-containing protein 2)	N/A
PHROG	UHGV-0022545_2	phrog_6320	62.2	8.1e-18	tail fiber protein	tail
Pfam	UHGV-0022545_2	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-0022545_3	K16628	90.6	3.5e-27	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0022545_3	phrog_819	95.3	4.60004e-41	tail protein	tail
eggNOG-mapper	UHGV-0022545_3	290402.Cbei_3387	97.8	3.17e-21	N/A	N/A
Pfam	UHGV-0022545_3	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0022545_4	phrog_6320	43.1	0.000000000005	tail fiber protein	tail
structural_annotation	UHGV-0022545_5	PF16640,TIGR04488	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0022545_6	1408437.JNJN01000060_gene452	138.0	2.26e-29	heme binding	N/A
COG	UHGV-0022545_6	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
PHROG	UHGV-0022545_8	phrog_37604	82.0	6.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0022545_8	1232443.BAIA02000078_gene10	77.8	2.74e-16	N/A	N/A
PHROG	UHGV-0022545_9	phrog_881	66.9	1.9e-19	holin	lysis
UniRef90	UHGV-0022545_9	UniRef90_UPI0018A8FD4D	76.6	1.29e-16	phage holin	N/A
eggNOG-mapper	UHGV-0022545_9	1680.BADO_1216	72.0	0.00000000000000155	Putative phage holin Dp-1	N/A
Pfam	UHGV-0022545_9	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0022545_9	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_10	phrog_11037	54.4	0.0000000000000019	N/A	unknown function
UniRef90	UHGV-0022545_10	UniRef90_A0A2V2EB84	85.5	4.07e-16	EF-hand domain-containing protein	N/A
eggNOG-mapper	UHGV-0022545_10	428127.EUBDOL_01569	79.3	0.0000000000000252	N/A	N/A
structural_annotation	UHGV-0022545_10	PF08460,PF01551,NF040883,NF033202,COG0739,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_11	phrog_16490	45.0	0.00000000000036	N/A	unknown function
eggNOG-mapper	UHGV-0022545_11	476272.RUMHYD_01770	66.6	0.0000000000817	N/A	N/A
PHROG	UHGV-0022545_12	phrog_22984	50.2	0.000000000000049	N/A	unknown function
NCBIFam	UHGV-0022545_14	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0022545_14	NF040910	N/A	N/A	N/A	N/A
UniRef90	UHGV-0022545_18	UniRef90_A0A847CX66	485.0	0	N/A	N/A
eggNOG-mapper	UHGV-0022545_18	871968.DESME_08885	134.0	4.17e-30	N/A	N/A
structural_annotation	UHGV-0022545_18	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022545_19	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_20	phrog_422	106.5	2.6e-31	major head protein	head and packaging
UniRef90	UHGV-0022545_20	UniRef90_UPI001C115D36	191.0	0	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0022545_20	1408437.JNJN01000001_gene1710	176.0	0	N/A	N/A
structural_annotation	UHGV-0022545_20	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0022545_21	755731.Clo1100_2435	63.9	0.00000000577	N/A	N/A
PHROG	UHGV-0022545_22	phrog_156	157.9	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0022545_22	693746.OBV_01670	333.0	0	N/A	N/A
structural_annotation	UHGV-0022545_22	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0022545_24	K21523	66.1	2.1e-20	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0022545_24	phrog_2	96.3	5e-28	terminase large subunit	head and packaging
UniRef90	UHGV-0022545_24	UniRef90_R5AHR8	441.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0022545_24	693746.OBV_23980	418.0	0	phage Terminase large subunit	N/A
COG	UHGV-0022545_24	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0022545_24	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_25	phrog_606	48.2	0.00000000000002	terminase small subunit	head and packaging
Pfam	UHGV-0022545_25	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
eggNOG-mapper	UHGV-0022545_28	97139.C824_00043	58.9	0.000000000492	N/A	N/A
PHROG	UHGV-0022545_29	phrog_7245	120.6	8.1e-36	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0022545_29	UniRef90_UPI001D06A358	144.0	1.17e-35	zincin-like metallopeptidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0022545_29	97139.C824_00155	150.0	1.18e-38	N/A	N/A
Pfam	UHGV-0022545_29	PF08401	N/A	N/A	N-terminal domain of anti-restriction factor ArdC	ArdcN
Pfam	UHGV-0022545_29	PF18818	N/A	N/A	Zincin-like metallopeptidase	MPTase-PolyVal
COG	UHGV-0022545_29	COG4227	N/A	N/A	Antirestriction protein ArdC	N/A
structural_annotation	UHGV-0022545_29	PF18818,PF08401,COG4227	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_50	phrog_918	102.5	1.7e-30	N/A	unknown function
UniRef90	UHGV-0022545_50	UniRef90_UPI001D0B68F4	125.0	1.68e-35	N/A	N/A
eggNOG-mapper	UHGV-0022545_50	411473.RUMCAL_00361	106.0	8e-29	N/A	N/A
Pfam	UHGV-0022545_50	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0022545_50	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_58	phrog_5968	122.3	3.4e-36	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022545_58	UniRef90_A0A1Q6LC25	160.0	2.8026e-44	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0022545_58	546271.Selsp_1350	139.0	8.68e-36	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-0022545_58	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0022545_58	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0022545_58	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0022545_58	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_61	phrog_4973	60.5	2.5e-17	N/A	unknown function
UniRef90	UHGV-0022545_61	UniRef90_A0A3R6RL03	51.2	0.000000629	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0022545_61	1072685.IX83_07155	47.4	0.00000289	Helix-turn-helix domain	N/A
Pfam	UHGV-0022545_61	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
KOfam	UHGV-0022545_62	K03111	50.1	0.000000000000062	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0022545_62	phrog_44	54.9	0.0000000000000021	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022545_62	UniRef90_A0A6G7Y1U6	58.9	0.0000000183	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0022545_62	406818.XBJ1_3380	55.8	0.0000000867	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0022545_62	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0022545_62	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0022545_62	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0022545_63	K01160	52.3	0.000000000000016	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0022545_63	phrog_1682	67.6	1.9e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022545_63	UniRef90_F8J189	99.8	1.88e-24	Putative Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0022545_63	508419.F8J189_9CAUD	99.8	3.15e-25	magnesium ion binding	N/A
Pfam	UHGV-0022545_63	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0022545_63	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_64	phrog_1389	42.5	0.000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0022545_64	1347392.CCEZ01000060_gene3269	57.8	0.00000000314	N/A	N/A
structural_annotation	UHGV-0022545_64	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_65	phrog_7566	79.9	2.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0022545_65	508419.F8J187_9CAUD	66.2	0.000000000000594	N/A	N/A
KOfam	UHGV-0022545_66	K16898	40.3	0.000000000022	addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]	N/A
PHROG	UHGV-0022545_66	phrog_298	80.4	1e-23	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022545_66	UniRef90_A0A3D5XTJ3	119.0	4.39e-30	Cas_Cas4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0022545_66	1399942.U3PDT7_9CAUD	95.9	9.36e-22	nuclease activity	N/A
Pfam	UHGV-0022545_66	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-0022545_66	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_67	phrog_6244	77.9	1.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0022545_67	1399942.U3PIX9_9CAUD	53.5	0.0000000899	N/A	N/A
structural_annotation	UHGV-0022545_67	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0022545_68	phrog_155	78.2	1.3e-22	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022545_68	UniRef90_UPI001E498420	112.0	1.75e-27	ERF family protein	N/A
eggNOG-mapper	UHGV-0022545_68	1415775.U729_2586	95.9	1.14e-21	ERF superfamily	N/A
Pfam	UHGV-0022545_68	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0022545_68	PF04404	N/A	N/A	N/A	N/A
Pfam	UHGV-0022545_70	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
UniRef90	UHGV-0022545_71	UniRef90_UPI001F4BDA5E	55.8	0.0000000134	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0022545_71	445972.ANACOL_01800	47.0	0.00000497	N/A	N/A
Pfam	UHGV-0022545_71	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0022545_71	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0022545_71	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0022545_72	K22300	57.7	2.8e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0022545_72	phrog_8	62.1	1.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0022545_72	UniRef90_UPI0005CCC150	65.5	0.0000000000238	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0022545_72	391009.Tmel_1479	57.0	0.0000000238	PFAM helix-turn-helix	N/A
PADLOC	UHGV-0022545_72	retron_type_VI_hth_cluster2_1	45.0	0.0000000000026	N/A	Retron
Pfam	UHGV-0022545_72	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0022545_72	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
KOfam	UHGV-0022545_73	K14059	175.1	0	int; integrase	N/A
PHROG	UHGV-0022545_73	phrog_1	160.7	0	integrase	integration and excision
UniRef90	UHGV-0022545_73	UniRef90_UPI00189AE8E1	216.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0022545_73	1123263.AUKY01000072_gene2117	129.0	3.5e-31	Phage integrase family	N/A
Pfam	UHGV-0022545_73	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0022545_73	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0022545_73	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A