UHGV-0023349 (vOTU-070890)

Viral Genome: UHGV-0023349

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0023349
vOTU ID	vOTU-070890
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_I_3_1743__NODE_817_length_60963_cov_15.782840
Associated BioSample	SAMEA4766023
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	31
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9813
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.62
Jumbo phage	No

Genome content
Genome length (bp)	60,963
GC content	39.37%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	91
CDS density	93%
Average CDS length (bps)	624.92
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0023349_1	phrog_11237	138.7	2.50006e-41	N/A	unknown function
eggNOG-mapper	UHGV-0023349_1	478749.BRYFOR_08581	127.0	1.04e-35	N/A	N/A
eggNOG-mapper	UHGV-0023349_3	693746.OBV_03260	69.7	0.0000000000184	Belongs to the 'phage' integrase family	N/A
COG	UHGV-0023349_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
eggNOG-mapper	UHGV-0023349_5	1453496.AT03_13425	75.1	5.49e-16	N/A	N/A
structural_annotation	UHGV-0023349_13	PF04606,NF007241,COG3478	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_16	phrog_20637	259.3	0	N/A	unknown function
UniRef90	UHGV-0023349_16	UniRef90_A0A174LFZ4	198.0	0	Catalase	N/A
eggNOG-mapper	UHGV-0023349_16	428125.CLOLEP_01386	266.0	0	N/A	N/A
Pfam	UHGV-0023349_16	PF18907	N/A	N/A	N/A	DUF5662
structural_annotation	UHGV-0023349_16	PF18907	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_19	phrog_6721	306.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0023349_19	537007.BLAHAN_05521	287.0	0	N/A	N/A
structural_annotation	UHGV-0023349_19	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_20	phrog_236	106.5	4.6e-31	nucleotide kinase	other
UniRef90	UHGV-0023349_20	UniRef90_A0A843GW04	84.3	1.18e-16	N/A	N/A
eggNOG-mapper	UHGV-0023349_20	889876.E2GLY2_9CAUD	85.5	8.06e-19	N/A	N/A
Pfam	UHGV-0023349_20	PF11753	N/A	N/A	N/A	DUF3310
KOfam	UHGV-0023349_23	K01449	94.0	1.6e-27	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0023349_23	phrog_17417	108.0	7.6e-32	N/A	unknown function
UniRef90	UHGV-0023349_23	UniRef90_UPI0013EEEFDF	192.0	0	cell wall hydrolase	N/A
eggNOG-mapper	UHGV-0023349_23	180332.JTGN01000012_gene307	84.7	1.37e-17	Cell wall hydrolase	N/A
Pfam	UHGV-0023349_23	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0023349_23	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0023349_23	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_31	phrog_19852	65.3	5.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0023349_31	742740.HMPREF9474_02297	52.8	0.00000000826	N/A	N/A
PHROG	UHGV-0023349_34	phrog_2152	78.5	7.7e-23	N/A	unknown function
UniRef90	UHGV-0023349_34	UniRef90_UPI00102F5881	185.0	0	N/A	N/A
Pfam	UHGV-0023349_34	PF19880	N/A	N/A	N/A	DUF6353
PHROG	UHGV-0023349_36	phrog_4079	96.5	3.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0023349_36	691965.D4P7H8_9CAUD	58.9	0.0000000567	N/A	N/A
PHROG	UHGV-0023349_37	phrog_2152	81.5	9e-24	N/A	unknown function
UniRef90	UHGV-0023349_37	UniRef90_UPI00103026DA	227.0	0	N/A	N/A
eggNOG-mapper	UHGV-0023349_37	691965.D4P7I0_9CAUD	75.1	0.00000000000112	N/A	N/A
Pfam	UHGV-0023349_37	PF19880	N/A	N/A	N/A	DUF6353
PHROG	UHGV-0023349_39	phrog_4695	53.9	0.0000000000000035	N/A	unknown function
PHROG	UHGV-0023349_40	phrog_4678	138.2	4.30002e-41	N/A	unknown function
eggNOG-mapper	UHGV-0023349_40	742733.HMPREF9469_05069	106.0	1.84e-26	N/A	N/A
PHROG	UHGV-0023349_42	phrog_4210	762.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023349_42	UniRef90_UPI0010317C75	1824.0	0	N/A	N/A
eggNOG-mapper	UHGV-0023349_42	411460.RUMTOR_02036	1054.0	0	N/A	N/A
Pfam	UHGV-0023349_42	PF19263	N/A	N/A	N/A	DUF5906
structural_annotation	UHGV-0023349_42	PF00136,PF09250,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_43	phrog_4787	103.9	9.3e-31	single strand annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0023349_43	742733.HMPREF9469_05065	102.0	4.02e-25	N/A	N/A
structural_annotation	UHGV-0023349_43	PF21265,MF_04153	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_45	phrog_62	143.8	1.00053e-42	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023349_45	UniRef90_A0A5B8WHV8	452.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0023349_45	742740.HMPREF9474_02299	455.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-0023349_45	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0023349_45	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_46	phrog_59	77.3	1.7e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023349_46	UniRef90_UPI001A92E013	90.9	4.32e-21	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0023349_46	1283338.Q4Z8Z0_BPTWO	52.4	0.00000141	sequence-specific DNA binding transcription factor activity	N/A
Pfam	UHGV-0023349_46	PF13392	N/A	N/A	HNH endonuclease	HNH_3
UniRef90	UHGV-0023349_47	UniRef90_A0A2U8UQZ1	93.6	7.62e-23	Hydrolase	N/A
eggNOG-mapper	UHGV-0023349_47	742740.HMPREF9474_02280	103.0	7.57e-28	N/A	N/A
structural_annotation	UHGV-0023349_47	PF01870,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_48	phrog_3953	120.5	1.1e-35	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023349_48	UniRef90_A0A374ABF7	172.0	0	N/A	N/A
eggNOG-mapper	UHGV-0023349_48	742740.HMPREF9474_02279	133.0	1.51e-36	N/A	N/A
Pfam	UHGV-0023349_48	PF10926	N/A	N/A	N/A	DUF2800
PHROG	UHGV-0023349_49	phrog_4291	694.4	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023349_49	UniRef90_A0A2V2EKY9	597.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0023349_49	665956.HMPREF1032_00665	593.0	0	Bacterial regulatory proteins, luxR family	N/A
Pfam	UHGV-0023349_49	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0023349_49	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_50	phrog_4303	80.0	2.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0023349_50	411460.RUMTOR_01355	76.6	3.36e-17	N/A	N/A
PHROG	UHGV-0023349_51	phrog_4259	110.3	8.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-0023349_51	411460.RUMTOR_01353	80.5	3.46e-18	N/A	N/A
PHROG	UHGV-0023349_52	phrog_4321	159.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023349_52	UniRef90_A0A4D6E4M9	137.0	8.1e-39	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0023349_52	478749.BRYFOR_08530	137.0	1.05e-39	N/A	N/A
UniRef90	UHGV-0023349_53	UniRef90_A0A2J8B846	176.0	0	Gln_amidase domain-containing protein	N/A
structural_annotation	UHGV-0023349_53	PF21435,NF011786	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_56	phrog_4247	138.3	1.79997e-41	virion structural protein	head and packaging
UniRef90	UHGV-0023349_56	UniRef90_A0A6B9JBW4	110.0	9.44e-29	Head-to-tail adaptor	N/A
eggNOG-mapper	UHGV-0023349_56	428125.CLOLEP_01407	112.0	8.62e-31	N/A	N/A
PHROG	UHGV-0023349_57	phrog_7021	40.5	0.000000000039	N/A	unknown function
eggNOG-mapper	UHGV-0023349_57	665956.HMPREF1032_00671	52.8	0.00000743	N/A	N/A
eggNOG-mapper	UHGV-0023349_58	1158606.I579_01932	55.1	0.000000431	N/A	N/A
PHROG	UHGV-0023349_59	phrog_9	221.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0023349_59	UniRef90_G5HR21	797.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0023349_59	742733.HMPREF9469_05033	797.0	0	Phage Terminase	N/A
Pfam	UHGV-0023349_59	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0023349_59	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0023349_59	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0023349_59	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_60	phrog_12	105.9	2.9e-31	portal protein	head and packaging
UniRef90	UHGV-0023349_60	UniRef90_UPI00103044E2	538.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0023349_60	742733.HMPREF9469_05032	494.0	0	Phage portal protein	N/A
Pfam	UHGV-0023349_60	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0023349_60	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0023349_61	K06904	66.3	1.1e-19	N/A	N/A
PHROG	UHGV-0023349_61	phrog_3270	691.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0023349_61	UniRef90_UPI001C27C418	582.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0023349_61	691965.D4P7D6_9CAUD	455.0	0	peptidase activity	N/A
structural_annotation	UHGV-0023349_61	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_62	phrog_4270	108.3	3.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-0023349_62	411460.RUMTOR_01344	116.0	1.98e-32	N/A	N/A
structural_annotation	UHGV-0023349_62	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023349_63	UniRef90_A0A2L1IW89	62.0	0.00000000025	Head-to-tail connector complex protein	N/A
eggNOG-mapper	UHGV-0023349_63	478749.BRYFOR_08519	78.2	1.69e-17	N/A	N/A
structural_annotation	UHGV-0023349_63	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_64	phrog_2645	320.8	0	major tail protein	tail
UniRef90	UHGV-0023349_64	UniRef90_A0A2U8UI58	265.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0023349_64	742733.HMPREF9469_05026	271.0	0	N/A	N/A
structural_annotation	UHGV-0023349_64	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-0023349_65	K01520	112.3	5.1e-33	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0023349_65	phrog_135	95.0	7.3e-28	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023349_65	UniRef90_A0A7X2P7B0	105.0	3.08e-26	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0023349_65	1074488.AGBX01000007_gene1378	103.0	4.81e-26	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-0023349_65	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-0023349_65	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0023349_65	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_66	phrog_4282	155.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0023349_66	478749.BRYFOR_08517	125.0	1.3e-34	N/A	N/A
PHROG	UHGV-0023349_67	phrog_4338	216.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0023349_67	411460.RUMTOR_01339	174.0	0	N/A	N/A
UniRef90	UHGV-0023349_68	UniRef90_UPI001A921C07	176.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0023349_68	742740.HMPREF9474_02263	127.0	2.63e-36	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0023349_68	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0023349_68	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_69	phrog_4372	140.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0023349_69	742722.HMPREF9463_00254	138.0	9.57e-30	nuclear chromosome segregation	N/A
Pfam	UHGV-0023349_69	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0023349_69	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0023349_69	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0023349_70	phrog_33	81.1	2.1e-23	distal tail protein Dit	tail
UniRef90	UHGV-0023349_70	UniRef90_A0A1C5W6B6	172.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0023349_70	1123263.AUKY01000068_gene490	153.0	2.4803e-43	tail component	N/A
Pfam	UHGV-0023349_70	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0023349_70	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0023349_70	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_71	phrog_1067	330.9	0	minor head protein	head and packaging
UniRef90	UHGV-0023349_71	UniRef90_A0A7G9G6Y3	337.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0023349_71	1123263.AUKY01000068_gene489	305.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0023349_71	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0023349_71	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-0023349_71	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0023349_71	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0023349_71	PF14594,PF13884,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_72	phrog_24159	68.4	7.4e-20	tail fiber protein	tail
eggNOG-mapper	UHGV-0023349_72	97138.C820_02002	64.3	0.0000000621	Peptidase_G2, IMC autoproteolytic cleavage domain	N/A
COG	UHGV-0023349_72	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
UniRef90	UHGV-0023349_73	UniRef90_A0A4Q5C8S3	72.4	0.00000000000000657	Histidine kinase	N/A
eggNOG-mapper	UHGV-0023349_73	742733.HMPREF9469_05008	71.6	0.00000000000000222	N/A	N/A
PHROG	UHGV-0023349_74	phrog_1084	52.2	0.00000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0023349_74	665956.HMPREF1032_00696	142.0	9.41673e-43	N/A	N/A
PHROG	UHGV-0023349_75	phrog_31538	41.3	0.00000000003	N/A	unknown function
eggNOG-mapper	UHGV-0023349_75	428125.CLOLEP_01433	65.9	0.00000000000056	N/A	N/A
PHROG	UHGV-0023349_76	phrog_13589	168.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0023349_76	428125.CLOLEP_01434	223.0	0	N/A	N/A
structural_annotation	UHGV-0023349_77	PF15868,NF012201	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023349_79	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0023349_86	phrog_4257	49.9	0.00000000000006	N/A	unknown function
eggNOG-mapper	UHGV-0023349_88	1033744.CAEL01000029_gene1265	73.2	6.49e-16	N/A	N/A
PHROG	UHGV-0023349_89	phrog_21357	107.9	5.9e-32	endolysin	lysis
UniRef90	UHGV-0023349_89	UniRef90_D4MVQ6	157.0	4.62428e-44	CHAP domain	N/A
eggNOG-mapper	UHGV-0023349_89	449447.MAE_16090	105.0	6.22e-23	CHAP domain	N/A
Pfam	UHGV-0023349_89	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0023349_89	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0023349_89	PF01471,PF00877,TIGR02594,TIGR03979,COG3942	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023349_90	UniRef90_A0A8J8MDZ2	64.7	0.00000000000153	Molybdate-binding protein	N/A
eggNOG-mapper	UHGV-0023349_90	622312.ROSEINA2194_03626	62.4	0.0000000000017	Helix-turn-helix domain	N/A
Pfam	UHGV-0023349_90	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0023349_90	PF09035,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0023349_91	K14059	266.6	0	int; integrase	N/A
PHROG	UHGV-0023349_91	phrog_1	237.0	0	integrase	integration and excision
UniRef90	UHGV-0023349_91	UniRef90_D4CDA2	408.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0023349_91	1280688.AUJB01000008_gene933	401.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0023349_91	PF02920	N/A	N/A	DNA binding domain of tn916 integrase	Integrase_DNA
Pfam	UHGV-0023349_91	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0023349_91	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0023349_91	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0023349_91	PF00589,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A