UHGV-0023500 (vOTU-043451)

Viral Genome: UHGV-0023500

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0023500
vOTU ID	vOTU-043451
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_K_1_1770__NODE_1688_length_42368_cov_219.524343
Associated BioSample	SAMEA4766029
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9826
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.59
Jumbo phage	No

Genome content
Genome length (bp)	42,305
GC content	55.72%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	65
CDS density	95%
Average CDS length (bps)	617.26
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0023500_1	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_2	phrog_20016	203.4	0	N/A	unknown function
UniRef90	UHGV-0023500_2	UniRef90_A0A285PT46	190.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0023500_2	397290.C810_05214	166.0	0	N/A	N/A
structural_annotation	UHGV-0023500_2	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_3	phrog_16490	141.3	2.79979e-42	N/A	unknown function
eggNOG-mapper	UHGV-0023500_3	658655.HMPREF0988_00917	134.0	5.7e-36	N/A	N/A
PHROG	UHGV-0023500_4	phrog_22984	79.7	3e-23	N/A	unknown function
PHROG	UHGV-0023500_5	phrog_21718	101.9	5.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-0023500_5	476272.RUMHYD_01768	76.6	7.4e-16	N/A	N/A
PHROG	UHGV-0023500_6	phrog_3754	89.7	3.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0023500_6	476272.RUMHYD_01764	156.0	0	N/A	N/A
UniRef90	UHGV-0023500_7	UniRef90_A0A8D9PDQ3	130.0	4.97e-38	ECF sigma factor	N/A
structural_annotation	UHGV-0023500_7	PF08281,MF_00674,NF041727,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_8	phrog_22978	818.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0023500_8	1410650.JHWL01000003_gene2814	260.0	0	N/A	N/A
Pfam	UHGV-0023500_8	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
eggNOG-mapper	UHGV-0023500_9	1410650.JHWL01000003_gene2815	60.1	0.000000447	N/A	N/A
UniRef90	UHGV-0023500_10	UniRef90_A0A8D9UGT1	128.0	1.36e-35	Sigma C capsid protein	N/A
PHROG	UHGV-0023500_11	phrog_511	233.6	0	internal virion protein	head and packaging
UniRef90	UHGV-0023500_11	UniRef90_A0A8D9UH72	840.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0023500_11	1226322.HMPREF1545_00785	330.0	0	N/A	N/A
structural_annotation	UHGV-0023500_11	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_12	phrog_12105	80.2	7.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0023500_12	1519439.JPJG01000060_gene1891	59.7	0.000000000778	N/A	N/A
PHROG	UHGV-0023500_13	phrog_435	57.5	2.7e-16	endolysin	lysis
UniRef90	UHGV-0023500_13	UniRef90_A0A8D9PDS4	367.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-0023500_13	1226322.HMPREF1545_01953	86.3	1.89e-17	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-0023500_13	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0023500_13	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_14	phrog_1129	67.7	1.1e-19	holin	lysis
UniRef90	UHGV-0023500_14	UniRef90_A0A1Q6RI18	122.0	2.59e-34	Enolase	N/A
eggNOG-mapper	UHGV-0023500_14	1226322.HMPREF1545_00069	129.0	8.58e-38	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0023500_14	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0023500_14	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_15	phrog_1863	64.6	9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0023500_15	748224.HMPREF9436_00408	94.0	1.97e-24	N/A	N/A
PHROG	UHGV-0023500_17	phrog_24451	48.0	0.00000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0023500_17	1408437.JNJN01000040_gene189	122.0	4.33e-34	N/A	N/A
Pfam	UHGV-0023500_18	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0023500_18	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0023500_18	PF04862,NF033675	N/A	N/A	N/A	N/A
KOfam	UHGV-0023500_19	K07296	49.8	0.000000000000036	ADIPOQ, ACDC; adiponectin	N/A
Pfam	UHGV-0023500_19	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0023500_19	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_20	phrog_15239	84.4	4.6e-25	N/A	unknown function
PHROG	UHGV-0023500_21	phrog_1357	264.1	0	major head protein	head and packaging
UniRef90	UHGV-0023500_21	UniRef90_A0A8D9UH64	707.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0023500_21	1449126.JQKL01000003_gene1695	419.0	0	N/A	N/A
Pfam	UHGV-0023500_21	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0023500_21	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0023500_21	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_22	phrog_13908	306.6	0	N/A	unknown function
UniRef90	UHGV-0023500_22	UniRef90_A0A844DRV7	118.0	1.91e-26	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0023500_22	1410650.JHWL01000003_gene2831	121.0	2.82e-29	N/A	N/A
UniRef90	UHGV-0023500_23	UniRef90_A0A8D9PDR6	163.0	0	YsxB-like protein	N/A
Pfam	UHGV-0023500_23	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0023500_23	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_24	phrog_156	338.4	0	portal protein	head and packaging
UniRef90	UHGV-0023500_24	UniRef90_A0A8D9UH10	1132.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0023500_24	748224.HMPREF9436_01396	530.0	0	N/A	N/A
structural_annotation	UHGV-0023500_24	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0023500_25	K06909	119.4	3.6e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0023500_25	phrog_979	193.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0023500_25	UniRef90_A0A8D9PDR5	952.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-0023500_25	748224.HMPREF9436_01395	613.0	0	Terminase-like family	N/A
Pfam	UHGV-0023500_25	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0023500_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0023500_25	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023500_26	UniRef90_A0A8D9PDT2	183.0	0	Brinker DNA-binding domain protein	N/A
eggNOG-mapper	UHGV-0023500_26	1226322.HMPREF1545_00042	144.0	1.31021e-42	N/A	N/A
structural_annotation	UHGV-0023500_26	PF04218,COG3677	N/A	N/A	N/A	N/A
KOfam	UHGV-0023500_28	K07726	43.6	0.0000000000053	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0023500_28	phrog_25567	52.3	0.0000000000000082	N/A	unknown function
UniRef90	UHGV-0023500_28	UniRef90_UPI00164AED9E	114.0	1.19e-30	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0023500_28	1235798.C817_04600	93.6	2.18e-23	N/A	N/A
Pfam	UHGV-0023500_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0023500_28	NF040522,COG2944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023500_29	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023500_32	PF04570	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_33	phrog_38832	79.2	1.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0023500_33	665956.HMPREF1032_03087	77.4	5.82e-16	N/A	N/A
structural_annotation	UHGV-0023500_33	PF11717,TIGR02450	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023500_38	UniRef90_A0A8D9PDK1	75.5	0.00000000000000273	Anti-repressor	N/A
KOfam	UHGV-0023500_40	K00558	135.1	5.60519e-45	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0023500_40	phrog_116	178.9	0	DNA methyltransferase	other
UniRef90	UHGV-0023500_40	UniRef90_A0A316NA61	355.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0023500_40	718252.FP2_16350	329.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0023500_40	oMTase_00004	165.3	0	orphan methyltransferase	RM
Pfam	UHGV-0023500_40	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0023500_40	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0023500_42	K00571	109.3	4.4e-32	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0023500_42	phrog_67	106.1	5.1e-32	DNA methyltransferase	other
UniRef90	UHGV-0023500_42	UniRef90_A0A1C6E5W1	390.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0023500_42	749222.Nitsa_1817	370.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0023500_42	MTase_II_00157	90.6	8.7e-27	Type II methyltransferase	RM
Pfam	UHGV-0023500_42	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0023500_42	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0023500_42	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_43	phrog_190	112.6	3e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023500_43	UniRef90_A0A8D9PDD6	264.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0023500_43	862517.HMPREF9225_1657	85.5	1.27e-19	N/A	N/A
Pfam	UHGV-0023500_43	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0023500_43	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_45	phrog_9804	72.4	6.4e-21	N/A	unknown function
UniRef90	UHGV-0023500_45	UniRef90_A0A8D9PDS1	243.0	0	Replisome organizer	N/A
eggNOG-mapper	UHGV-0023500_45	903814.ELI_3550	85.9	4.19e-19	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0023500_45	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0023500_45	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_46	phrog_15768	94.6	6.4e-29	N/A	unknown function
UniRef90	UHGV-0023500_46	UniRef90_UPI001959E913	113.0	6.94e-28	N/A	N/A
eggNOG-mapper	UHGV-0023500_46	445970.ALIPUT_02689	87.8	2.38e-18	DNA-binding transcription factor activity	N/A
AcrCatalog	UHGV-0023500_46	cluster_38323	90.9	2.74e-24	NA	N/A
Pfam	UHGV-0023500_46	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0023500_46	COG2188	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-0023500_46	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0023500_49	K03111	144.9	7.90332e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0023500_49	phrog_44	147.6	6.44597e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023500_49	UniRef90_A0A350TKS2	221.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0023500_49	1226322.HMPREF1545_04080	206.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0023500_49	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0023500_49	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0023500_49	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0023500_49	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0023500_49	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_50	phrog_7566	100.2	1.1e-29	N/A	unknown function
UniRef90	UHGV-0023500_50	UniRef90_A0A8D9UHC0	179.0	0	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0023500_50	693746.OBV_24070	118.0	1.82e-33	N/A	N/A
PHROG	UHGV-0023500_51	phrog_72	50.7	0.000000000000016	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023500_51	UniRef90_A0A8D9PDS2	325.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0023500_51	445972.ANACOL_01825	129.0	2.29e-35	N/A	N/A
structural_annotation	UHGV-0023500_51	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_52	phrog_155	145.4	3.50325e-43	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023500_52	UniRef90_UPI001439856C	201.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0023500_52	97138.C820_00777	183.0	0	ERF superfamily	N/A
Pfam	UHGV-0023500_52	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0023500_52	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_53	phrog_253	83.0	3.9e-24	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023500_53	UniRef90_A0A8D9PDS3	248.0	0	Resistance protein	N/A
eggNOG-mapper	UHGV-0023500_53	748224.HMPREF9436_03356	86.3	3.98e-19	Siphovirus Gp157	N/A
Pfam	UHGV-0023500_53	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0023500_53	PF05565	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023500_55	UniRef90_A0A8D9UH91	276.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0023500_55	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0023500_55	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0023500_57	phrog_22529	43.5	0.0000000000031	N/A	unknown function
UniRef90	UHGV-0023500_57	UniRef90_A0A8D9UHA1	240.0	0	3D containing protein	N/A
eggNOG-mapper	UHGV-0023500_57	742733.HMPREF9469_00853	63.2	0.000000000805	3D domain	N/A
Pfam	UHGV-0023500_57	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0023500_57	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0023500_57	COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023500_58	UniRef90_UPI000F0633F9	63.2	0.00000000000928	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0023500_58	693746.OBV_43260	70.5	0.00000000000000204	N/A	N/A
structural_annotation	UHGV-0023500_58	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023500_59	UniRef90_A0A8D9PDN2	126.0	7.42e-37	DNA-binding protein	N/A
structural_annotation	UHGV-0023500_59	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023500_60	PF13601,MF_01819,TIGR02337,COG3432	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023500_62	UniRef90_A0A8D9UHB1	140.0	2.18995e-41	Repressor protein CI	N/A
eggNOG-mapper	UHGV-0023500_62	1226322.HMPREF1545_00148	72.0	0.00000000000000826	Transcriptional	N/A
Pfam	UHGV-0023500_62	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0023500_62	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0023500_62	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0023500_63	1120998.AUFC01000015_gene1569	73.9	0.000000000000163	competence protein COMEC	N/A
COG	UHGV-0023500_63	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
PHROG	UHGV-0023500_64	phrog_8	40.4	0.000000000049	transcriptional regulator	transcription regulation
UniRef90	UHGV-0023500_64	UniRef90_A0A8D9UHA6	330.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0023500_64	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0023500_64	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0023500_65	K14059	115.9	5.6e-34	int; integrase	N/A
PHROG	UHGV-0023500_65	phrog_1	123.4	2.4e-36	integrase	integration and excision
UniRef90	UHGV-0023500_65	UniRef90_UPI00195CC1EE	329.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0023500_65	1235835.C814_03141	157.0	9.1701e-42	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0023500_65	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0023500_65	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0023500_65	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0023500_65	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A