UHGV-0023623 (vOTU-043460)

Viral Genome: UHGV-0023623

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0023623
vOTU ID	vOTU-043460
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_P_7_2143__NODE_2489_length_44248_cov_6.772837
Associated BioSample	SAMEA4766166
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9806
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.68
Jumbo phage	No

Genome content
Genome length (bp)	44,225
GC content	62.93%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	93%
Average CDS length (bps)	720.05
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0023623_3	K21919	91.6	6.5e-27	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0023623_3	phrog_923	87.2	8.5e-26	N/A	unknown function
UniRef90	UHGV-0023623_3	UniRef90_UPI001A9B9B76	145.0	5.24002e-41	pentapeptide repeat-containing protein	N/A
Pfam	UHGV-0023623_3	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
COG	UHGV-0023623_3	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023623_3	PF13599,NF000421,COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023623_4	PF21291,NF041951,COG1513	N/A	N/A	N/A	N/A
Pfam	UHGV-0023623_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0023623_6	COG1709	N/A	N/A	Predicted transcriptional regulator,contains XRE-type HTH domain	N/A
PHROG	UHGV-0023623_9	phrog_7838	133.6	1.6e-39	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023623_9	UniRef90_A0A8D9UGW3	191.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0023623_9	742767.HMPREF9456_02052	167.0	0	N/A	N/A
structural_annotation	UHGV-0023623_9	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_10	phrog_72	56.6	2.7e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023623_10	UniRef90_A0A8D9PDS2	148.0	5.57997e-42	NinB protein	N/A
eggNOG-mapper	UHGV-0023623_10	445972.ANACOL_01825	150.0	1.06499e-43	N/A	N/A
structural_annotation	UHGV-0023623_10	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_11	phrog_7370	56.4	4.8e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023623_11	UniRef90_A0A3D1LDS4	113.0	1.63e-30	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0023623_11	445972.ANACOL_01826	99.4	5.97e-26	HNH nucleases	N/A
KOfam	UHGV-0023623_12	K03111	123.5	2.6e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0023623_12	phrog_44	124.8	6.7e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023623_12	UniRef90_A0A810QFR8	167.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0023623_12	1007096.BAGW01000007_gene1922	160.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0023623_12	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0023623_12	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0023623_12	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0023623_12	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0023623_12	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_14	phrog_16304	44.4	0.0000000000022	N/A	unknown function
UniRef90	UHGV-0023623_14	UniRef90_UPI001E36D421	117.0	5.36e-29	N/A	N/A
eggNOG-mapper	UHGV-0023623_14	1139219.I569_00067	96.7	4.48e-21	DnaD domain protein	N/A
Pfam	UHGV-0023623_14	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0023623_14	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0023623_14	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_18	phrog_190	95.2	6.5e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023623_18	UniRef90_UPI001C82C15D	101.0	2.21e-25	N/A	N/A
eggNOG-mapper	UHGV-0023623_18	342113.DM82_1124	94.7	9.25e-23	N/A	N/A
Pfam	UHGV-0023623_18	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0023623_18	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_20	phrog_757	167.6	0	DNA methyltransferase	other
UniRef90	UHGV-0023623_20	UniRef90_A0A3E2U1Y9	264.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0023623_20	748224.HMPREF9436_03069	243.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0023623_20	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0023623_20	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_21	phrog_38832	59.4	1.2e-17	N/A	unknown function
structural_annotation	UHGV-0023623_21	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_22	phrog_3136	133.8	5.5e-40	N/A	unknown function
UniRef90	UHGV-0023623_22	UniRef90_UPI001C02A61B	126.0	1.25e-32	ASCH domain-containing protein	N/A
COG	UHGV-0023623_22	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0023623_22	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_23	phrog_5781	90.2	2.2e-26	N/A	unknown function
UniRef90	UHGV-0023623_23	UniRef90_A0A3E2T6B6	107.0	1.58e-28	N/A	N/A
eggNOG-mapper	UHGV-0023623_23	667121.ET1_08_00770	100.0	2.06e-26	N/A	N/A
Pfam	UHGV-0023623_23	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0023623_23	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0023623_23	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_28	phrog_156	301.9	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0023623_28	1410650.JHWL01000003_gene2833	533.0	0	N/A	N/A
structural_annotation	UHGV-0023623_28	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0023623_29	K07584	47.5	0.00000000000034	N/A	N/A
PHROG	UHGV-0023623_29	phrog_4478	51.6	0.0000000000000097	peptidase	other
UniRef90	UHGV-0023623_29	UniRef90_A0A7Y3P0U9	53.9	0.000000466	Ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-0023623_29	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0023623_29	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023623_29	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_30	phrog_13908	171.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0023623_30	1410650.JHWL01000003_gene2831	94.7	2.09e-19	N/A	N/A
PHROG	UHGV-0023623_31	phrog_1357	204.6	0	major head protein	head and packaging
UniRef90	UHGV-0023623_31	UniRef90_A0A2V2CFL5	560.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0023623_31	1410650.JHWL01000003_gene2830	261.0	0	N/A	N/A
NCBIFam	UHGV-0023623_31	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0023623_31	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_32	phrog_15239	40.8	0.000000000033	N/A	unknown function
PHROG	UHGV-0023623_33	phrog_12105	128.2	3.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-0023623_33	1519439.JPJG01000060_gene1891	82.8	1.13e-18	N/A	N/A
PHROG	UHGV-0023623_34	phrog_511	214.0	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0023623_34	1410650.JHWL01000003_gene2827	306.0	0	N/A	N/A
structural_annotation	UHGV-0023623_34	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023623_35	NF038340	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_36	phrog_372	239.9	0	tail protein	tail
UniRef90	UHGV-0023623_36	UniRef90_A0A415H839	146.0	1.12e-33	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-0023623_36	1235799.C818_01005	134.0	1.57e-30	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0023623_36	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0023623_36	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0023623_36	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
KOfam	UHGV-0023623_38	K07726	40.2	0.000000000057	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0023623_38	phrog_25567	50.4	0.000000000000031	N/A	unknown function
UniRef90	UHGV-0023623_38	UniRef90_UPI00164AED9E	113.0	3.39e-30	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0023623_38	1410631.JHWZ01000002_gene1263	50.1	0.00000161	sequence-specific DNA binding	N/A
Pfam	UHGV-0023623_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0023623_38	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0023623_38	NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0023623_41	K06909	130.6	1.4e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0023623_41	phrog_979	123.8	1.8e-38	terminase large subunit	head and packaging
UniRef90	UHGV-0023623_41	UniRef90_A0A3C0NMI6	595.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0023623_41	1410650.JHWL01000003_gene2834	553.0	0	N/A	N/A
Pfam	UHGV-0023623_41	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0023623_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0023623_41	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_42	phrog_2649	53.1	0.0000000000000075	endolysin	lysis
UniRef90	UHGV-0023623_42	UniRef90_A0A1Q6JKP1	154.0	2.96e-39	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0023623_42	1410650.JHWL01000003_gene2815	119.0	7.8e-27	N/A	N/A
Pfam	UHGV-0023623_42	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
PHROG	UHGV-0023623_43	phrog_22978	502.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0023623_43	693746.OBV_01590	520.0	0	N/A	N/A
Pfam	UHGV-0023623_43	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
structural_annotation	UHGV-0023623_44	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-0023623_46	K01447	81.8	1e-23	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0023623_46	phrog_1794	153.4	1.4013e-45	amidase	lysis
UniRef90	UHGV-0023623_46	UniRef90_UPI00049795D9	170.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0023623_46	411468.CLOSCI_00531	155.0	1.56e-40	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0023623_46	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0023623_46	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0023623_46	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0023623_46	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-0023623_46	PF01510,PF18342,MF_04111,NF008758,NF040670,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_47	phrog_4105	41.4	0.000000000024	N/A	unknown function
eggNOG-mapper	UHGV-0023623_47	1120998.AUFC01000030_gene2251	51.2	0.000000795	N/A	N/A
PHROG	UHGV-0023623_48	phrog_1129	67.7	1.2e-19	holin	lysis
UniRef90	UHGV-0023623_48	UniRef90_A0A316PMB0	117.0	1.29e-32	Enolase	N/A
eggNOG-mapper	UHGV-0023623_48	665956.HMPREF1032_03272	117.0	2.17e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0023623_48	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0023623_48	PF06946	N/A	N/A	N/A	N/A
Pfam	UHGV-0023623_49	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
eggNOG-mapper	UHGV-0023623_52	1378168.N510_03079	85.9	2.55e-18	N/A	N/A
KOfam	UHGV-0023623_53	K14059	149.8	3.08286e-44	int; integrase	N/A
PHROG	UHGV-0023623_53	phrog_1	155.3	0	integrase	integration and excision
UniRef90	UHGV-0023623_53	UniRef90_A0A2Z4QB94	273.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0023623_53	1423724.BAMM01000034_gene2135	77.8	0.000000000000469	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0023623_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0023623_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0023623_53	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023623_54	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0023623_55	phrog_14556	43.7	0.0000000000026	N/A	unknown function
eggNOG-mapper	UHGV-0023623_55	477974.Daud_0706	72.0	0.0000000000019	PFAM copper amine oxidase domain protein	N/A
COG	UHGV-0023623_55	COG0103	N/A	N/A	Ribosomal protein S9	N/A
PHROG	UHGV-0023623_56	phrog_8	61.7	2.2e-33	transcriptional regulator	transcription regulation
UniRef90	UHGV-0023623_56	UniRef90_UPI001D088238	85.1	2.61e-16	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0023623_56	1378168.N510_01712	79.3	0.0000000000000128	N/A	N/A
Pfam	UHGV-0023623_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0023623_57	phrog_21498	281.8	0	N/A	unknown function
UniRef90	UHGV-0023623_57	UniRef90_A0A4Q5AKJ0	223.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0023623_57	78346.BRUM_0376	234.0	0	DNA binding	N/A
COG	UHGV-0023623_57	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0023623_57	PF05869,TIGR01712	N/A	N/A	N/A	N/A