UHGV-0025180 (vOTU-064504)

Viral Genome: UHGV-0025180

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0025180
vOTU ID	vOTU-064504
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_P_3_2141__NODE_2412_length_33661_cov_8.171719
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	96.48 (High-quality)
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9804
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	57.61
Jumbo phage	No

Genome content
Genome length (bp)	33,661
GC content	61.16%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	94%
Average CDS length (bps)	688.70
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0025180_1	phrog_263	80.8	1.1e-23	holin	lysis
UniRef90	UHGV-0025180_1	UniRef90_A0A2A7AXH0	120.0	8.21e-34	Phage holin	N/A
eggNOG-mapper	UHGV-0025180_1	718252.FP2_06470	113.0	1.02e-31	SPP1 phage holin	N/A
Pfam	UHGV-0025180_1	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0025180_1	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0025180_1	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_2	phrog_1863	73.6	1.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0025180_2	748224.HMPREF9436_01412	121.0	3.23e-35	N/A	N/A
KOfam	UHGV-0025180_3	K08640	109.3	5.7e-32	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0025180_3	phrog_894	111.5	9.3e-33	endolysin	lysis
UniRef90	UHGV-0025180_3	UniRef90_A0A3E2TR57	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025180_3	748224.HMPREF9436_03320	214.0	0	Peptidase M15	N/A
Pfam	UHGV-0025180_3	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0025180_3	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025180_3	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_4	phrog_11541	64.5	1e-18	N/A	unknown function
UniRef90	UHGV-0025180_4	UniRef90_A0A173V0S4	477.0	0	SGNH_hydro domain-containing protein	N/A
eggNOG-mapper	UHGV-0025180_4	877415.JNJQ01000011_gene667	127.0	8.17e-33	GDSL-like Lipase/Acylhydrolase family	N/A
Pfam	UHGV-0025180_4	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
structural_annotation	UHGV-0025180_4	PF16255,MF_00526,NF007819,COG2755	N/A	N/A	N/A	N/A
KOfam	UHGV-0025180_5	K20846	60.8	1.4e-17	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-0025180_5	phrog_215	84.8	1.2e-24	structural protein with Ig domain	head and packaging
UniRef90	UHGV-0025180_5	UniRef90_A0A2A7B122	488.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0025180_5	657322.FPR_13550	420.0	0	Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-0025180_5	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0025180_5	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0025180_5	COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_6	phrog_10993	182.8	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0025180_6	UniRef90_UPI001D06A2D2	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025180_6	1121334.KB911071_gene1970	161.0	0	N/A	N/A
Pfam	UHGV-0025180_6	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0025180_6	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_7	phrog_9534	273.0	0	head protein	head and packaging
UniRef90	UHGV-0025180_7	UniRef90_Q73EE6	94.7	4.18e-20	Phage structural protein, truncation	N/A
eggNOG-mapper	UHGV-0025180_7	748224.HMPREF9436_03323	279.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0025180_7	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_8	phrog_538	180.3	0	minor tail protein	tail
UniRef90	UHGV-0025180_8	UniRef90_UPI001899858F	100.0	1.59e-20	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0025180_8	748224.HMPREF9436_03324	598.0	0	N/A	N/A
Pfam	UHGV-0025180_8	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0025180_8	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_9	phrog_36410	47.1	0.00000000000036	N/A	unknown function
UniRef90	UHGV-0025180_9	UniRef90_UPI00130E98E0	302.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0025180_9	748224.HMPREF9436_03325	463.0	0	Phage tail protein	N/A
structural_annotation	UHGV-0025180_9	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_10	phrog_28775	914.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0025180_10	UniRef90_A0A2J4JRN1	962.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0025180_10	748224.HMPREF9436_03326	338.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0025180_10	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-0025180_10	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0025180_10	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_11	phrog_706	116.7	1.7e-34	N/A	unknown function
UniRef90	UHGV-0025180_11	UniRef90_E2ZNP9	253.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0025180_11	748224.HMPREF9436_03328	253.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0025180_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0025180_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_12	phrog_4450	132.9	9.90001e-40	N/A	unknown function
structural_annotation	UHGV-0025180_12	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_13	phrog_820	102.6	2.8e-30	major tail protein	tail
eggNOG-mapper	UHGV-0025180_13	748224.HMPREF9436_03330	275.0	0	N/A	N/A
structural_annotation	UHGV-0025180_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_14	phrog_3266	139.9	8.59977e-42	tail completion	connector
UniRef90	UHGV-0025180_14	UniRef90_UPI001F2730AA	92.0	5.04e-21	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0025180_14	748224.HMPREF9436_03331	217.0	0	N/A	N/A
structural_annotation	UHGV-0025180_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_15	phrog_556	93.7	1.3e-27	minor head protein	head and packaging
UniRef90	UHGV-0025180_15	UniRef90_UPI000B10EF5E	287.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0025180_15	718252.FP2_06630	266.0	0	Minor capsid protein	N/A
Pfam	UHGV-0025180_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0025180_15	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_16	phrog_3366	111.2	7.1e-33	N/A	unknown function
Pfam	UHGV-0025180_16	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0025180_16	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_17	phrog_541	82.0	6.5e-24	head-tail adaptor	connector
PHROG	UHGV-0025180_18	phrog_267	82.0	6.2e-24	major head protein	head and packaging
UniRef90	UHGV-0025180_18	UniRef90_A0A0D8J2H9	359.0	0	p22 coat protein 5	N/A
eggNOG-mapper	UHGV-0025180_18	718252.FP2_06660	392.0	0	N/A	N/A
structural_annotation	UHGV-0025180_18	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_19	phrog_194	64.1	2.9e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-0025180_19	UniRef90_D4K444	246.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0025180_19	748224.HMPREF9436_03336	240.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0025180_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0025180_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_21	phrog_581	343.1	0	minor head protein	head and packaging
UniRef90	UHGV-0025180_21	UniRef90_A0A2K9V3K1	929.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0025180_21	748224.HMPREF9436_03339	637.0	0	N/A	N/A
Pfam	UHGV-0025180_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0025180_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025180_21	PF06152,PF07737,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_22	phrog_533	266.6	0	portal protein	head and packaging
UniRef90	UHGV-0025180_22	UniRef90_A0A7G9WF85	375.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0025180_22	718252.FP2_06700	689.0	0	N/A	N/A
Pfam	UHGV-0025180_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0025180_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0025180_23	K06909	90.6	2e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0025180_23	phrog_2	121.5	1.1e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0025180_23	UniRef90_A0A844EGH8	802.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0025180_23	1449050.JNLE01000003_gene3895	409.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0025180_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0025180_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0025180_23	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_24	phrog_2412	89.8	3e-26	N/A	unknown function
UniRef90	UHGV-0025180_24	UniRef90_UPI000DE85101	68.6	0.00000000000424	stress-induced protein	N/A
eggNOG-mapper	UHGV-0025180_24	742738.HMPREF9460_02504	114.0	5.74e-31	N/A	N/A
PHROG	UHGV-0025180_25	phrog_36	79.5	5.1e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0025180_25	UniRef90_A0A6N7TNN9	94.4	5.49e-22	N/A	N/A
eggNOG-mapper	UHGV-0025180_25	748224.HMPREF9436_01463	101.0	1.29e-25	N/A	N/A
structural_annotation	UHGV-0025180_25	PF04545,MF_00674,NF005248,COG1595	N/A	N/A	N/A	N/A
KOfam	UHGV-0025180_26	K01160	48.8	0.00000000000018	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0025180_26	phrog_140	95.7	4.9e-28	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025180_26	UniRef90_UPI00122CFAB3	241.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0025180_26	394503.Ccel_3302	143.0	2.83062e-42	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0025180_26	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0025180_26	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0025180_26	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0025180_27	K07505	365.4	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0025180_27	phrog_2597	1089.4	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025180_27	UniRef90_A0A2A7AI73	1335.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0025180_27	742738.HMPREF9460_01357	874.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0025180_27	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0025180_27	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0025180_27	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0025180_27	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0025180_28	K17677	347.7	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0025180_28	phrog_16	276.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025180_28	UniRef90_A0A3A6K1C0	989.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0025180_28	610130.Closa_1369	767.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0025180_28	mREase_IV_00005	136.9	1.8e-40	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0025180_28	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0025180_28	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0025180_28	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0025180_28	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_29	phrog_2698	194.7	0	N/A	unknown function
UniRef90	UHGV-0025180_29	UniRef90_A0A291T9B6	290.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025180_29	394503.Ccel_3308	134.0	8.67e-38	N/A	N/A
structural_annotation	UHGV-0025180_29	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_30	phrog_124	231.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025180_30	UniRef90_UPI00122C2B12	568.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0025180_30	645991.Sgly_0321	368.0	0	AAA domain	N/A
Pfam	UHGV-0025180_30	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0025180_30	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0025180_31	K03546	55.5	7.2e-16	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0025180_31	phrog_1499	467.2	0	N/A	unknown function
UniRef90	UHGV-0025180_31	UniRef90_A0A2A7AIJ9	597.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-0025180_31	641112.ACOK01000073_gene2873	412.0	0	domain protein	N/A
Pfam	UHGV-0025180_31	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0025180_31	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0025180_31	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_32	phrog_1733	46.1	0.00000000000081	N/A	unknown function
eggNOG-mapper	UHGV-0025180_32	665956.HMPREF1032_03597	95.1	1.84e-18	DNA binding	N/A
COG	UHGV-0025180_32	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0025180_32	PF03677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025180_33	UniRef90_UPI001D0E65C2	132.0	6.95e-38	N/A	N/A
structural_annotation	UHGV-0025180_33	PF12957	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025180_35	PF07875,TIGR02501	N/A	N/A	N/A	N/A
PHROG	UHGV-0025180_38	phrog_32852	73.8	1.6e-21	N/A	unknown function
UniRef90	UHGV-0025180_39	UniRef90_UPI000F0633F9	56.6	0.00000000676	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0025180_39	693746.OBV_43260	47.8	0.00000352	N/A	N/A
structural_annotation	UHGV-0025180_39	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025180_42	UniRef90_UPI001D0EF465	58.2	0.000000000795	BC1881 family protein	N/A
KOfam	UHGV-0025180_45	K22300	60.1	5e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0025180_45	phrog_4	49.9	0.000000000000073	transcriptional repressor	transcription regulation
UniRef90	UHGV-0025180_45	UniRef90_A0A564SVW9	137.0	3.38e-39	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-0025180_45	748224.HMPREF9436_01444	127.0	4.69e-36	N/A	N/A
Pfam	UHGV-0025180_45	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0025180_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0025180_45	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A