UHGV-0026076 (vOTU-086663)

Viral Genome: UHGV-0026076

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0026076
vOTU ID	vOTU-086663
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_G_3_1732__NODE_1321_length_42881_cov_8.448369
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	95.38 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9754
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	31.94
Jumbo phage	No

Genome content
Genome length (bp)	42,881
GC content	33.21%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	74
CDS density	92%
Average CDS length (bps)	530.68
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 95.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0026076_1	phrog_8781	47.2	0.00000000000033	endolysin	lysis
UniRef90	UHGV-0026076_1	UniRef90_R9LNW5	199.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0026076_1	1235796.C815_01769	199.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0026076_1	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0026076_1	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0026076_1	TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_2	phrog_443	53.2	0.0000000000000077	holin	lysis
UniRef90	UHGV-0026076_2	UniRef90_A0A2U2ELA1	77.4	2.73e-17	Membrane protein	N/A
eggNOG-mapper	UHGV-0026076_2	476272.RUMHYD_01759	84.3	1.13e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0026076_2	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0026076_2	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_4	phrog_20016	62.1	6.9e-18	N/A	unknown function
UniRef90	UHGV-0026076_4	UniRef90_A0A395WF88	259.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0026076_4	1226322.HMPREF1545_00077	55.8	0.0000000662	N/A	N/A
Pfam	UHGV-0026076_4	PF18573	N/A	N/A	BclA C-terminal domain	BclA_C
structural_annotation	UHGV-0026076_4	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026076_5	UniRef90_A0A8F0WFQ8	68.2	0.000000000358	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0026076_5	476272.RUMHYD_01770	108.0	1.05e-26	N/A	N/A
structural_annotation	UHGV-0026076_10	PF03425,NF033675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026076_13	1232452.BAIB02000007_gene1610	67.8	0.00000000231	N/A	N/A
structural_annotation	UHGV-0026076_14	PF16407,TIGR02657,COG3794	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026076_15	PF05895,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026076_16	PF10651,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_17	phrog_1067	44.7	1.4e-20	minor head protein	head and packaging
eggNOG-mapper	UHGV-0026076_17	1232446.BAIE02000002_gene836	62.0	0.000000321	Phage minor structural protein	N/A
NCBIFam	UHGV-0026076_17	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0026076_17	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0026076_17	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_18	phrog_33	52.5	0.000000000000012	distal tail protein Dit	tail
UniRef90	UHGV-0026076_18	UniRef90_UPI0004D3F0A3	57.4	0.00000326	phage tail family protein	N/A
Pfam	UHGV-0026076_18	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0026076_18	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0026076_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0026076_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0026076_19	K10402	43.4	0.0000000000013	KIF20; kinesin family member 20	N/A
PHROG	UHGV-0026076_19	phrog_13339	334.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0026076_19	UniRef90_A0A395WD11	1874.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0026076_19	642492.Clole_0830	254.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0026076_19	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0026076_19	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0026076_19	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0026076_19	PF10145,TIGR01760,TIGR02971,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_20	phrog_709	44.5	0.0000000000023	N/A	unknown function
structural_annotation	UHGV-0026076_20	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_21	phrog_88	141.8	3.39955e-42	major tail protein	tail
UniRef90	UHGV-0026076_21	UniRef90_A0A395WA58	401.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0026076_21	1033744.CAEL01000029_gene1276	152.0	1.03696e-43	Phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0026076_21	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0026076_21	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026076_22	UniRef90_A0A374RUJ8	143.0	1.76998e-41	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0026076_22	86416.Clopa_0344	59.7	0.00000000164	N/A	N/A
Pfam	UHGV-0026076_22	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0026076_22	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026076_23	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_24	phrog_1951	73.3	2.2e-21	head-tail adaptor	connector
UniRef90	UHGV-0026076_24	UniRef90_A0A395WC07	221.0	0	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0026076_24	588581.Cpap_1270	62.0	0.0000000000666	N/A	N/A
structural_annotation	UHGV-0026076_24	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_25	phrog_5223	51.2	0.000000000000016	neck protein	connector
UniRef90	UHGV-0026076_25	UniRef90_A0A374RXD1	82.0	2.19e-18	DNA-packaging protein	N/A
structural_annotation	UHGV-0026076_25	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_26	phrog_10	81.3	1.3e-23	major head protein	head and packaging
UniRef90	UHGV-0026076_26	UniRef90_A0A395WF70	791.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0026076_26	1536774.H70357_10630	166.0	4.90454e-44	Phage capsid family	N/A
Pfam	UHGV-0026076_26	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0026076_26	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0026076_26	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0026076_26	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0026076_27	K06904	88.2	1.1e-25	N/A	N/A
PHROG	UHGV-0026076_27	phrog_80	117.5	1.7e-34	head maturation protease	head and packaging
UniRef90	UHGV-0026076_27	UniRef90_A0A413UET6	352.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0026076_27	411470.RUMGNA_02064	174.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0026076_27	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0026076_27	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0026076_27	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0026076_27	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_28	phrog_12	107.1	1.2e-31	portal protein	head and packaging
UniRef90	UHGV-0026076_28	UniRef90_A0A395W9X2	807.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0026076_28	1203606.HMPREF1526_01337	288.0	0	Portal protein	N/A
Pfam	UHGV-0026076_28	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0026076_28	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0026076_28	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_29	phrog_9	310.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0026076_29	UniRef90_A0A395WD03	1121.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0026076_29	742740.HMPREF9474_04307	548.0	0	COG COG4626 Phage terminase-like protein, large subunit	N/A
Pfam	UHGV-0026076_29	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0026076_29	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0026076_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0026076_29	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_30	phrog_361	74.5	1.2e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0026076_30	UniRef90_A0A1C6H6I9	80.1	6.43e-17	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0026076_30	1329516.JPST01000017_gene431	50.1	0.00000474	Phage terminase, small subunit	N/A
Pfam	UHGV-0026076_30	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0026076_30	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0026076_30	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_31	phrog_119	54.5	0.0000000000000014	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026076_31	UniRef90_A0A395WA48	259.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0026076_31	1211814.CAPG01000074_gene3460	65.9	0.0000000000207	HNH endonuclease	N/A
COG	UHGV-0026076_31	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0026076_33	502558.EGYY_11910	62.8	0.000000000119	N/A	N/A
eggNOG-mapper	UHGV-0026076_36	592031.GCWU000322_00057	71.2	0.00000000000173	N/A	N/A
PHROG	UHGV-0026076_41	phrog_2316	46.2	0.00000000000082	N/A	unknown function
UniRef90	UHGV-0026076_41	UniRef90_A0A3E4YBW5	118.0	8.2e-33	N/A	N/A
eggNOG-mapper	UHGV-0026076_41	1280676.AUJO01000024_gene3262	63.5	0.00000000000605	N/A	N/A
structural_annotation	UHGV-0026076_41	PF16475,MF_00436,NF033216	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026076_42	PF10879	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026076_44	UniRef90_A0A413UEX6	283.0	0	N/A	N/A
Pfam	UHGV-0026076_44	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0026076_44	PF07374,NF008895	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_51	phrog_3002	43.7	0.0000000000027	N/A	unknown function
structural_annotation	UHGV-0026076_52	PF11061	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_53	phrog_22292	41.6	0.00000000001	N/A	unknown function
structural_annotation	UHGV-0026076_54	PF01104,NF041014	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_57	phrog_2715	124.6	5e-37	N/A	unknown function
eggNOG-mapper	UHGV-0026076_57	642492.Clole_0950	124.0	3.62e-34	N/A	N/A
structural_annotation	UHGV-0026076_57	PF18406	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026076_60	PF17888	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_61	phrog_173	89.1	5.9e-26	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026076_61	UniRef90_UPI001D0A0924	263.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0026076_61	1423321.AS29_16210	67.8	0.00000000000572	dUTPase	N/A
Pfam	UHGV-0026076_61	PF08761	N/A	N/A	dUTPase	dUTPase_2
COG	UHGV-0026076_61	COG4508	N/A	N/A	Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily	N/A
structural_annotation	UHGV-0026076_61	PF08761,COG4508	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026076_62	PF13392,PF07453	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026076_65	UniRef90_R6T064	83.6	2.76e-16	NUMOD4 domain-containing protein	N/A
structural_annotation	UHGV-0026076_65	PF13392,PF07453	N/A	N/A	N/A	N/A
KOfam	UHGV-0026076_66	K02315	120.1	2.3e-35	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0026076_66	phrog_50	108.0	1e-31	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026076_66	UniRef90_A0A395WER8	528.0	0	Bac_DnaA domain-containing protein	N/A
eggNOG-mapper	UHGV-0026076_66	1232446.BAIE02000011_gene1611	133.0	6.28e-35	N/A	N/A
Pfam	UHGV-0026076_66	PF00308	N/A	N/A	Bacterial dnaA protein	Bac_DnaA
COG	UHGV-0026076_66	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0026076_66	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0026076_67	phrog_428	145.3	4.49817e-43	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026076_67	UniRef90_A0A395WBX6	405.0	0	Phg_2220_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0026076_67	279808.SH2379	155.0	1.7236e-43	Conserved phage C-terminus (Phg_2220_C)	N/A
Pfam	UHGV-0026076_67	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0026076_67	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-0026076_67	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0026076_67	PF09524,PF08679,MF_01909,TIGR02220,NF040939,COG1675	N/A	N/A	N/A	N/A
KOfam	UHGV-0026076_69	K04763	136.1	3.60001e-40	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0026076_69	phrog_1	119.6	3.2e-35	integrase	integration and excision
UniRef90	UHGV-0026076_69	UniRef90_A0A395W9T7	578.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0026076_69	908340.HMPREF9406_2589	231.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0026076_69	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0026076_69	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0026076_69	PF00589,PF13495,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026076_71	UniRef90_UPI001D14AAA4	73.9	0.00000000000000326	N/A	N/A
KOfam	UHGV-0026076_74	K18830	63.5	3.8e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0026076_74	phrog_2967	60.1	4e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0026076_74	UniRef90_A0A395WA05	153.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0026076_74	999413.HMPREF1094_02045	99.4	1.93e-25	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0026076_74	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026076_74	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0026076_74	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A