UHGV-0026152 (vOTU-033354)

Viral Genome: UHGV-0026152

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0026152
vOTU ID	vOTU-033354
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_K_17_1778__NODE_4954_length_24376_cov_6.798387
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.55 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9802
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.26
Jumbo phage	No

Genome content
Genome length (bp)	24,376
GC content	35.36%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	31
CDS density	94%
Average CDS length (bps)	742.07
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0026152_1	K07451	41.4	0.000000000021	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0026152_1	phrog_119	64.6	1.3e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026152_1	UniRef90_UPI00073F2BD4	83.2	2.29e-18	N/A	N/A
eggNOG-mapper	UHGV-0026152_1	491915.Aflv_0659	61.6	0.000000000121	HNH nucleases	N/A
COG	UHGV-0026152_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0026152_3	phrog_9	266.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0026152_3	UniRef90_A0A7X5E0X5	501.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0026152_3	610130.Closa_0741	483.0	0	Phage Terminase	N/A
Pfam	UHGV-0026152_3	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0026152_3	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0026152_3	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0026152_3	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0026152_4	phrog_12	84.7	5.3e-25	portal protein	head and packaging
UniRef90	UHGV-0026152_4	UniRef90_A0A1G4FJP8	194.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0026152_4	349161.Dred_2606	188.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0026152_4	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0026152_4	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0026152_4	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0026152_5	K01358	139.8	2.4e-41	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0026152_5	phrog_94	217.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0026152_5	UniRef90_A0A7U4LNK5	161.0	4.2039e-45	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0026152_5	1295642.H839_15963	154.0	4.52619e-43	Serine dehydrogenase proteinase	N/A
Pfam	UHGV-0026152_5	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0026152_5	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0026152_5	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0026152_6	phrog_10	112.6	3.9e-33	major head protein	head and packaging
UniRef90	UHGV-0026152_6	UniRef90_A0A8H0URR8	258.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0026152_6	864178.E2ELI5_9CAUD	252.0	0	peptidase activity	N/A
Pfam	UHGV-0026152_6	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0026152_6	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0026152_6	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0026152_7	phrog_749	53.6	0.0000000000000022	N/A	unknown function
UniRef90	UHGV-0026152_7	UniRef90_A0A396SIZ8	61.2	0.000000000682	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0026152_7	1415774.U728_1251	54.3	0.0000000688	N/A	N/A
eggNOG-mapper	UHGV-0026152_9	663278.Ethha_1842	50.8	0.00000159	N/A	N/A
PHROG	UHGV-0026152_11	phrog_88	149.5	1.54143e-44	major tail protein	tail
UniRef90	UHGV-0026152_11	UniRef90_UPI0011DDC47F	123.0	7.45e-32	phage tail protein	N/A
eggNOG-mapper	UHGV-0026152_11	1033744.CAEL01000029_gene1276	119.0	3.93e-31	Phage major tail protein, phi13 family	N/A
Pfam	UHGV-0026152_11	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0026152_11	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0026152_11	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0026152_12	phrog_11037	49.7	0.000000000000053	N/A	unknown function
UniRef90	UHGV-0026152_12	UniRef90_A0A1T4LEQ5	85.9	0.00000000000000169	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0026152_12	1235796.C815_00900	64.7	0.00000000345	N/A	N/A
Pfam	UHGV-0026152_12	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
PHROG	UHGV-0026152_13	phrog_881	65.7	4.4e-19	holin	lysis
UniRef90	UHGV-0026152_13	UniRef90_UPI0018A8FD4D	74.7	7.97e-16	phage holin	N/A
eggNOG-mapper	UHGV-0026152_13	158787.BSCA_0719	57.0	0.00000000224	Putative phage holin Dp-1	N/A
Pfam	UHGV-0026152_13	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0026152_13	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-0026152_16	K20478	51.6	0.0000000000000014	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0026152_16	phrog_1533	316.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0026152_16	UniRef90_A0A3A6DL62	202.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0026152_16	1408424.JHYI01000032_gene3813	202.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0026152_16	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0026152_16	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0026152_16	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0026152_16	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0026152_17	phrog_33	80.7	3e-23	distal tail protein Dit	tail
UniRef90	UHGV-0026152_17	UniRef90_A0A1C6H6D2	140.0	1.98e-37	Phage-related protein	N/A
eggNOG-mapper	UHGV-0026152_17	545697.HMPREF0216_00910	84.7	6.35e-17	tail component	N/A
Pfam	UHGV-0026152_17	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0026152_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0026152_17	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0026152_18	phrog_1067	316.6	0	minor head protein	head and packaging
UniRef90	UHGV-0026152_18	UniRef90_A0A7U9R9D6	389.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0026152_18	1123263.AUKY01000068_gene489	343.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0026152_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0026152_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0026152_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0026152_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026152_21	411470.RUMGNA_00117	104.0	2.57e-22	N/A	N/A
Pfam	UHGV-0026152_21	PF11839	N/A	N/A	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
COG	UHGV-0026152_21	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0026152_21	PF03422,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-0026152_22	phrog_372	197.5	0	tail protein	tail
UniRef90	UHGV-0026152_22	UniRef90_A0A374AAJ7	131.0	1.35e-28	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0026152_22	1123309.AQYB01000019_gene906	78.2	0.00000000000361	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0026152_22	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0026152_22	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0026152_22	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0026152_23	phrog_3279	74.8	1.1e-21	tail fiber protein	tail
structural_annotation	UHGV-0026152_26	PF07638,MF_00674,TIGR02954,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0026152_28	phrog_22984	65.2	8.7e-19	N/A	unknown function
structural_annotation	UHGV-0026152_30	PF18573,NF033147	N/A	N/A	N/A	N/A