UHGV-0026651 (vOTU-043739)

Viral Genome: UHGV-0026651

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0026651
vOTU ID	vOTU-043739
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_B_20_1162__NODE_1375_length_37778_cov_28.380388
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.69
Jumbo phage	No

Genome content
Genome length (bp)	37,703
GC content	50.73%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	58
CDS density	95%
Average CDS length (bps)	615.67
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0026651_3	phrog_36	45.3	0.0000000000015	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0026651_3	428125.CLOLEP_01806	80.1	5.22e-17	N/A	N/A
Pfam	UHGV-0026651_3	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0026651_3	PF07374,TIGR01636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026651_4	1235798.C817_04600	74.7	6.34e-16	N/A	N/A
structural_annotation	UHGV-0026651_4	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_7	phrog_7339	102.0	5.2e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026651_7	UniRef90_A0A2V2GLL9	438.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0026651_7	1150474.JQJI01000006_gene784	91.7	3.65e-19	metallophosphoesterase	N/A
Pfam	UHGV-0026651_7	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0026651_7	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-0026651_7	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026651_8	UniRef90_A0A8D9UHF6	168.0	0	N/A	N/A
eggNOG-mapper	UHGV-0026651_8	272630.MexAM1_META1p3985	55.8	0.00000000922	N/A	N/A
KOfam	UHGV-0026651_9	K06909	139.4	3.20001e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0026651_9	phrog_979	161.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0026651_9	UniRef90_A0A8D9UH35	921.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-0026651_9	1232449.BAHV02000016_gene1824	476.0	0	N/A	N/A
Pfam	UHGV-0026651_9	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0026651_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0026651_9	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_10	phrog_156	172.5	0	portal protein	head and packaging
UniRef90	UHGV-0026651_10	UniRef90_A0A8D9UHD1	1101.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0026651_10	1121091.AUMP01000003_gene2583	365.0	0	N/A	N/A
structural_annotation	UHGV-0026651_10	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026651_11	UniRef90_A0A8D9UHD6	120.0	9.58e-35	Ogr/Delta-like zinc finger	N/A
structural_annotation	UHGV-0026651_11	PF20020	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026651_12	UniRef90_A0A8D9UHB9	415.0	0	Non-structural protein 5	N/A
PHROG	UHGV-0026651_13	phrog_1357	243.8	0	major head protein	head and packaging
UniRef90	UHGV-0026651_13	UniRef90_A0A8D9UHB3	598.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0026651_13	696281.Desru_1092	291.0	0	N/A	N/A
NCBIFam	UHGV-0026651_13	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0026651_13	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_14	phrog_15239	43.2	0.0000000000054	N/A	unknown function
PHROG	UHGV-0026651_16	phrog_3287	132.2	2.4e-39	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0026651_16	665956.HMPREF1032_03917	475.0	0	N/A	N/A
structural_annotation	UHGV-0026651_16	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
KOfam	UHGV-0026651_17	K19719	94.7	1.1e-28	COL2A; collagen type II alpha	N/A
PHROG	UHGV-0026651_17	phrog_819	181.3	0	tail protein	tail
UniRef90	UHGV-0026651_17	UniRef90_A0A8D9PE13	597.0	0	Virion structural protein	N/A
Pfam	UHGV-0026651_17	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0026651_17	COG4675	N/A	N/A	Phage tail collar domain	N/A
KOfam	UHGV-0026651_18	K10457	69.4	2.2e-34	KLHL20, KLEIP; kelch-like protein 20	N/A
PHROG	UHGV-0026651_18	phrog_12615	50.8	2e-22	N/A	unknown function
Pfam	UHGV-0026651_18	PF01344	N/A	N/A	Kelch motif	Kelch_1
Pfam	UHGV-0026651_18	PF13418	N/A	N/A	Galactose oxidase, central domain	Kelch_4
COG	UHGV-0026651_18	COG3055	N/A	N/A	N-acetylneuraminic acid mutarotase	N/A
structural_annotation	UHGV-0026651_18	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026651_19	UniRef90_A0A8D9UHD8	79.7	0.0000000000026	mRNA splicing protein	N/A
Pfam	UHGV-0026651_19	PF13418	N/A	N/A	Galactose oxidase, central domain	Kelch_4
structural_annotation	UHGV-0026651_19	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_21	phrog_2310	54.7	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0026651_21	1415774.U728_3409	51.6	0.0000000259	N/A	N/A
PHROG	UHGV-0026651_22	phrog_1863	58.0	1.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0026651_22	718252.FP2_04900	77.0	1.68e-17	N/A	N/A
eggNOG-mapper	UHGV-0026651_23	1347392.CCEZ01000017_gene1158	52.4	0.000000237	N/A	N/A
KOfam	UHGV-0026651_24	K01448	58.9	8.1e-17	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0026651_24	phrog_435	73.0	5.3e-21	endolysin	lysis
UniRef90	UHGV-0026651_24	UniRef90_A0A2V2GRI9	473.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0026651_24	994573.T472_0210960	94.0	1.22e-20	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0026651_24	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0026651_24	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0026651_24	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026651_25	MF_01304	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_26	phrog_31411	56.9	1.6e-16	N/A	unknown function
UniRef90	UHGV-0026651_26	UniRef90_A0A8D9UHE1	3262.0	0	PolyVal ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0026651_26	1408437.JNJN01000060_gene452	442.0	0	heme binding	N/A
Pfam	UHGV-0026651_26	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-0026651_26	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
KOfam	UHGV-0026651_28	K14059	201.0	0	int; integrase	N/A
PHROG	UHGV-0026651_28	phrog_1	181.2	0	integrase	integration and excision
UniRef90	UHGV-0026651_28	UniRef90_A0A8D9PE11	709.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0026651_28	1507.HMPREF0262_00307	200.0	0	Phage integrase family	N/A
Pfam	UHGV-0026651_28	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0026651_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0026651_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0026651_28	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026651_31	UniRef90_A0A8D9PDX9	168.0	0	Histone H3.3 finger-like protein	N/A
UniRef90	UHGV-0026651_32	UniRef90_UPI001E2EC555	204.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0026651_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0026651_32	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_33	phrog_8	48.4	0.00000000000022	transcriptional regulator	transcription regulation
UniRef90	UHGV-0026651_33	UniRef90_UPI001E54DE4F	142.0	6.91961e-42	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0026651_33	1297617.JPJD01000059_gene2644	80.1	1.18e-17	addiction module antidote protein HigA	N/A
Pfam	UHGV-0026651_33	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0026651_33	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0026651_33	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026651_34	UniRef90_UPI001956DCC9	89.4	3.47e-22	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0026651_34	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026651_36	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_40	phrog_14970	184.6	0	N/A	unknown function
UniRef90	UHGV-0026651_40	UniRef90_UPI00123F00F5	166.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0026651_40	428127.EUBDOL_01248	152.0	1.17709e-43	double-strand break repair protein	N/A
Pfam	UHGV-0026651_40	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0026651_40	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0026651_40	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_41	phrog_1389	66.7	3.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0026651_41	883156.HMPREF9282_01223	67.4	0.000000000000573	N/A	N/A
structural_annotation	UHGV-0026651_41	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_42	phrog_7566	51.8	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0026651_42	693746.OBV_24070	69.7	0.0000000000000683	N/A	N/A
KOfam	UHGV-0026651_43	K03111	132.4	5.5e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0026651_43	phrog_44	134.9	5.5e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026651_43	UniRef90_UPI001E2A5A6F	228.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0026651_43	1235835.C814_01372	133.0	4.29e-38	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0026651_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0026651_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0026651_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0026651_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0026651_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_44	phrog_16304	90.2	2.6e-26	N/A	unknown function
UniRef90	UHGV-0026651_44	UniRef90_UPI001E560709	417.0	0	N/A	N/A
eggNOG-mapper	UHGV-0026651_44	290402.Cbei_3733	61.6	0.0000000132	DnaD domain protein	N/A
Pfam	UHGV-0026651_44	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0026651_44	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0026651_44	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_45	phrog_9804	169.9	0	N/A	unknown function
UniRef90	UHGV-0026651_45	UniRef90_UPI001E312ACC	303.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0026651_45	1121344.JHZO01000003_gene981	179.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0026651_45	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0026651_45	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_46	phrog_954	193.9	0	DNA methyltransferase	other
UniRef90	UHGV-0026651_46	UniRef90_UPI00195B0EE7	268.0	0	methyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-0026651_46	411461.DORFOR_01143	230.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0026651_46	MTase_II_00074	192.4	0	Type II methyltransferase	RM
Pfam	UHGV-0026651_46	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0026651_46	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0026651_46	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
KOfam	UHGV-0026651_47	K01160	68.6	1.6e-19	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0026651_47	phrog_34	73.1	4.4e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026651_47	UniRef90_A0A498CNH4	152.0	1.4013e-45	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0026651_47	477974.Daud_0813	52.0	0.00000183	N/A	N/A
Pfam	UHGV-0026651_47	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0026651_47	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026651_49	TIGR04381	N/A	N/A	N/A	N/A
PHROG	UHGV-0026651_54	phrog_3777	80.3	1.4e-23	N/A	unknown function
UniRef90	UHGV-0026651_54	UniRef90_A0A417F883	136.0	2.21e-38	N/A	N/A
eggNOG-mapper	UHGV-0026651_54	411462.DORLON_00813	70.9	0.000000000000101	N/A	N/A
Pfam	UHGV-0026651_54	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-0026651_54	PF12957	N/A	N/A	N/A	N/A