UHGV-0026826 (vOTU-043766)

Viral Genome: UHGV-0026826

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0026826
vOTU ID	vOTU-043766
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_H_22_2297__NODE_1955_length_35248_cov_14.790737
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	14
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	38.7
Jumbo phage	No

Genome content
Genome length (bp)	35,171
GC content	57.83%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	93%
Average CDS length (bps)	572.16
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0026826_1	phrog_474	45.3	0.000000000002	phosphofructokinase	other
eggNOG-mapper	UHGV-0026826_1	428125.CLOLEP_01367	48.5	0.000000617	N/A	N/A
Pfam	UHGV-0026826_1	PF19905	N/A	N/A	N/A	DUF6378
PHROG	UHGV-0026826_2	phrog_21498	308.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0026826_2	78346.BRUM_0376	252.0	0	DNA binding	N/A
COG	UHGV-0026826_2	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0026826_2	PF05869,TIGR01712	N/A	N/A	N/A	N/A
KOfam	UHGV-0026826_4	K03240	44.9	0.00000000000078	EIF2B5; translation initiation factor eIF-2B subunit epsilon	N/A
PHROG	UHGV-0026826_4	phrog_5353	50.5	0.000000000000028	N/A	unknown function
Pfam	UHGV-0026826_4	PF00132	N/A	N/A	Bacterial transferase hexapeptide (six repeats)	Hexapep
structural_annotation	UHGV-0026826_4	MF_00387,TIGR03992,COG2171	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_6	phrog_478	118.7	2.7e-35	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0026826_6	UniRef90_R6E548	167.0	0	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-0026826_6	1111121.HMPREF1247_0834	96.3	8.18e-24	N/A	N/A
PHROG	UHGV-0026826_7	phrog_36	49.7	0.000000000000066	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0026826_7	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0026826_8	K07451	45.3	0.0000000000014	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0026826_8	phrog_144	73.3	3e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026826_8	UniRef90_A0A373VSA3	100.0	7.92e-25	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0026826_8	279808.SH1777	63.5	0.0000000000293	HNH nucleases	N/A
Pfam	UHGV-0026826_8	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0026826_8	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0026826_9	UniRef90_UPI001898F58A	160.0	0	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0026826_9	397288.C806_00077	129.0	4.08e-35	N/A	N/A
structural_annotation	UHGV-0026826_9	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_10	phrog_9	259.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0026826_10	UniRef90_UPI0018982ECF	868.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0026826_10	1414720.CBYM010000002_gene575	780.0	0	Terminase	N/A
Pfam	UHGV-0026826_10	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0026826_10	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0026826_10	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0026826_10	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_11	phrog_12	206.5	0	portal protein	head and packaging
UniRef90	UHGV-0026826_11	UniRef90_UPI00189D81A2	509.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0026826_11	1304866.K413DRAFT_1223	388.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0026826_11	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0026826_11	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0026826_11	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
PHROG	UHGV-0026826_12	phrog_6332	56.4	2.2e-16	N/A	unknown function
UniRef90	UHGV-0026826_12	UniRef90_A0A353JB32	65.9	0.00000000000326	Cys_rich_CPCC domain-containing protein	N/A
eggNOG-mapper	UHGV-0026826_12	520709.F985_03245	62.0	0.000000000012	Cysteine-rich CPCC	N/A
Pfam	UHGV-0026826_12	PF14206	N/A	N/A	Cysteine-rich CPCC	Cys_rich_CPCC
KOfam	UHGV-0026826_13	K06904	75.2	1.1e-21	N/A	N/A
PHROG	UHGV-0026826_13	phrog_80	99.0	7.1e-29	head maturation protease	head and packaging
UniRef90	UHGV-0026826_13	UniRef90_UPI00082C16F5	254.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0026826_13	1304866.K413DRAFT_1224	160.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0026826_13	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-0026826_13	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0026826_13	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_14	phrog_10	236.0	0	major head protein	head and packaging
UniRef90	UHGV-0026826_14	UniRef90_UPI0009511B79	542.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0026826_14	397288.C806_00073	310.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0026826_14	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0026826_14	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0026826_14	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0026826_14	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_15	phrog_40	46.3	0.00000000000057	head-tail adaptor Ad1	connector
UniRef90	UHGV-0026826_15	UniRef90_A0A412ZBS2	67.8	0.000000000000884	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0026826_15	1294142.CINTURNW_0294	64.3	0.00000000000308	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0026826_15	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0026826_15	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0026826_15	PF05135,TIGR01560	N/A	N/A	N/A	N/A
Pfam	UHGV-0026826_16	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0026826_16	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026826_17	742738.HMPREF9460_04074	74.7	7.15e-16	N/A	N/A
structural_annotation	UHGV-0026826_17	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026826_18	1203606.HMPREF1526_00974	55.5	0.0000000996	N/A	N/A
PHROG	UHGV-0026826_19	phrog_88	78.3	9e-23	major tail protein	tail
UniRef90	UHGV-0026826_19	UniRef90_A0A7X2TMG2	63.2	0.00000000516	Major tail protein	N/A
eggNOG-mapper	UHGV-0026826_19	1195236.CTER_5106	53.9	0.00000236	phage major tail protein, phi13 family	N/A
COG	UHGV-0026826_19	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026826_19	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026826_20	PF11836,TIGR01674	N/A	N/A	N/A	N/A
KOfam	UHGV-0026826_21	K03529	54.7	2.2e-18	smc; chromosome segregation protein	N/A
PHROG	UHGV-0026826_21	phrog_991	75.1	8.2e-22	tail length tape measure protein	tail
UniRef90	UHGV-0026826_21	UniRef90_UPI00189B6D86	144.0	5.14e-31	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0026826_21	931626.Awo_c30950	156.0	9.51e-36	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0026826_21	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0026826_21	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0026826_21	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_22	phrog_36410	113.7	4.9e-34	N/A	unknown function
UniRef90	UHGV-0026826_22	UniRef90_A0A658JW57	201.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0026826_22	755731.Clo1100_0556	167.0	0	Phage tail protein	N/A
COG	UHGV-0026826_22	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0026826_22	PF05709,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_23	phrog_538	187.4	0	minor tail protein	tail
UniRef90	UHGV-0026826_23	UniRef90_UPI001C63A74C	149.0	3.22e-36	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0026826_23	999411.HMPREF1092_00928	94.0	1.86e-18	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0026826_23	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0026826_23	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_24	phrog_1220	151.1	0	head protein	head and packaging
eggNOG-mapper	UHGV-0026826_24	1230342.CTM_17042	94.0	1.73e-20	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0026826_24	PF20747	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026826_25	1121451.DESAM_p0005	71.2	0.000000000144	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0026826_25	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0026826_26	phrog_18593	77.5	1.6e-22	N/A	unknown function
UniRef90	UHGV-0026826_26	UniRef90_A0A658JW59	159.0	1.4013e-45	Chitinase	N/A
eggNOG-mapper	UHGV-0026826_26	1226322.HMPREF1545_04028	158.0	0	N/A	N/A
Pfam	UHGV-0026826_26	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-0026826_27	K06381	164.9	0	spoIID; stage II sporulation protein D	N/A
PHROG	UHGV-0026826_27	phrog_894	49.5	0.000000000000047	endolysin	lysis
UniRef90	UHGV-0026826_27	UniRef90_A0A7C3GNE4	108.0	1.14e-22	SpoIID/LytB domain-containing protein	N/A
eggNOG-mapper	UHGV-0026826_27	1274524.BSONL12_16629	106.0	8.5e-22	Stage II sporulation protein	N/A
Pfam	UHGV-0026826_27	PF08486	N/A	N/A	Stage II sporulation protein	SpoIID
Pfam	UHGV-0026826_27	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0026826_27	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
NCBIFam	UHGV-0026826_27	TIGR02669.1	N/A	N/A	SpoIID/LytB domain-containing protein	N/A
COG	UHGV-0026826_27	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
structural_annotation	UHGV-0026826_27	PF08486,PF01471,TIGR02669,TIGR02869,COG2385,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_28	phrog_1863	41.3	0.000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0026826_28	1235797.C816_02840	79.3	7.83e-18	N/A	N/A
PHROG	UHGV-0026826_30	phrog_6918	67.1	2.1e-19	holin	lysis
UniRef90	UHGV-0026826_30	UniRef90_U2S4Z6	55.5	0.0000000997	Phage holin, LL-H family	N/A
eggNOG-mapper	UHGV-0026826_30	1226322.HMPREF1545_03575	55.5	0.0000000167	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0026826_30	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0026826_30	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026826_31	UniRef90_A0A843IZ65	55.8	0.0000000111	Sigma70_r4 domain-containing protein	N/A
AcrCatalog	UHGV-0026826_32	cluster_11486	58.5	0.0000000000000955	NA	N/A
UniRef90	UHGV-0026826_33	UniRef90_R6DRH1	82.4	2.7e-16	Putative TnpX site-specific recombinase	N/A
eggNOG-mapper	UHGV-0026826_33	742740.HMPREF9474_00056	113.0	6.63e-29	N/A	N/A
structural_annotation	UHGV-0026826_33	COG4068	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026826_34	PF10723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026826_36	742740.HMPREF9474_00056	89.0	4.38e-18	N/A	N/A
PHROG	UHGV-0026826_38	phrog_16490	45.7	0.0000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0026826_38	397290.C810_05212	67.0	0.000000000185	N/A	N/A
structural_annotation	UHGV-0026826_39	PF18573,NF033147	N/A	N/A	N/A	N/A
KOfam	UHGV-0026826_41	K14059	211.7	0	int; integrase	N/A
PHROG	UHGV-0026826_41	phrog_1	178.8	0	integrase	integration and excision
UniRef90	UHGV-0026826_41	UniRef90_A0A7X8VA17	118.0	3.71e-26	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0026826_41	498848.TaqDRAFT_4755	115.0	5.55e-26	Phage integrase family	N/A
Pfam	UHGV-0026826_41	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0026826_41	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0026826_41	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0026826_41	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0026826_43	K18830	48.2	0.000000000000089	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
UniRef90	UHGV-0026826_43	UniRef90_A0A3R6JTC8	121.0	7.16e-33	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0026826_43	445972.ANACOL_03315	119.0	4.84e-33	N/A	N/A
Pfam	UHGV-0026826_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026826_43	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0026826_43	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0026826_45	PF08797	N/A	N/A	HIRAN domain	HIRAN
structural_annotation	UHGV-0026826_48	PF05339,MF_00535,NF002773,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_54	phrog_9474	102.5	3.8e-30	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0026826_54	401526.TcarDRAFT_1306	74.3	0.000000000000734	N/A	N/A
COG	UHGV-0026826_54	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0026826_54	PF09681,PF07261,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0026826_55	K01160	43.8	0.0000000000062	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0026826_55	phrog_1682	82.9	4.1e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026826_55	UniRef90_U2Q8K8	137.0	3.28e-39	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0026826_55	1226322.HMPREF1545_04070	137.0	5.5e-40	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0026826_55	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0026826_55	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0026826_57	phrog_474	45.8	0.0000000000014	phosphofructokinase	other
eggNOG-mapper	UHGV-0026826_57	1095750.HMPREF9970_1026	52.8	0.0000000151	N/A	N/A
Pfam	UHGV-0026826_57	PF19905	N/A	N/A	N/A	DUF6378