UHGV-0027466 (vOTU-153135)

Viral Genome: UHGV-0027466

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0027466
vOTU ID	vOTU-153135
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_E_9_1723__NODE_2262_length_32558_cov_4.930975
Associated BioSample	SAMEA4766003
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	81.06 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9775
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	43.25
Jumbo phage	No

Genome content
Genome length (bp)	32,558
GC content	38.92%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	56
CDS density	90%
Average CDS length (bps)	524.41
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 81.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0027466_1	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
PHROG	UHGV-0027466_3	phrog_18190	61.5	1e-19	N/A	unknown function
structural_annotation	UHGV-0027466_3	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_4	phrog_1194	56.3	5.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0027466_4	1304866.K413DRAFT_3047	88.2	1.55e-20	N/A	N/A
Pfam	UHGV-0027466_4	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0027466_4	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_5	phrog_1535	459.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0027466_5	UniRef90_A0A2N0ULX3	1261.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0027466_5	742740.HMPREF9474_03514	327.0	0	tape measure	N/A
COG	UHGV-0027466_5	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0027466_5	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_7	phrog_706	124.6	6.8e-37	N/A	unknown function
UniRef90	UHGV-0027466_7	UniRef90_UPI001B3C82AE	257.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0027466_7	1160721.RBI_II00530	199.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0027466_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0027466_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_8	phrog_11299	109.1	3.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0027466_8	1449050.JNLE01000003_gene3883	74.3	0.00000000000000563	N/A	N/A
structural_annotation	UHGV-0027466_8	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_9	phrog_3099	149.8	1.26117e-44	N/A	unknown function
eggNOG-mapper	UHGV-0027466_9	1160721.RBI_II00532	236.0	0	N/A	N/A
structural_annotation	UHGV-0027466_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_10	phrog_3266	105.1	4.3e-31	tail completion	connector
eggNOG-mapper	UHGV-0027466_10	1449050.JNLE01000003_gene3885	147.0	1.1911e-43	N/A	N/A
structural_annotation	UHGV-0027466_10	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_11	phrog_556	110.6	7.1e-33	minor head protein	head and packaging
UniRef90	UHGV-0027466_11	UniRef90_UPI001B3C5A2B	181.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0027466_11	1449050.JNLE01000003_gene3886	172.0	0	N/A	N/A
Pfam	UHGV-0027466_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0027466_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_12	phrog_3366	59.9	1.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0027466_12	1449050.JNLE01000003_gene3887	86.7	2.85e-20	N/A	N/A
Pfam	UHGV-0027466_12	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0027466_12	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_13	phrog_541	89.8	2.5e-26	head-tail adaptor	connector
UniRef90	UHGV-0027466_13	UniRef90_A0A371AQT0	89.0	1.85e-20	N/A	N/A
eggNOG-mapper	UHGV-0027466_13	1449050.JNLE01000003_gene3888	94.0	3.17e-23	N/A	N/A
Pfam	UHGV-0027466_13	PF20557	N/A	N/A	Putative DnaT-like ssDNA binding protein	DnaT_2
PHROG	UHGV-0027466_14	phrog_422	232.9	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0027466_14	693746.OBV_18090	380.0	0	N/A	N/A
structural_annotation	UHGV-0027466_14	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_15	phrog_194	63.9	2.6e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-0027466_15	UniRef90_UPI0018995066	260.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0027466_15	742765.HMPREF9457_02126	129.0	1.06e-35	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0027466_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0027466_15	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027466_16	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_18	phrog_581	312.1	0	minor head protein	head and packaging
UniRef90	UHGV-0027466_18	UniRef90_A0A2N0ULU5	682.0	0	Putative ADP-ribosyltransferase Certhrax	N/A
eggNOG-mapper	UHGV-0027466_18	1449050.JNLE01000003_gene3892	372.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0027466_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0027466_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027466_18	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_19	phrog_533	327.2	0	portal protein	head and packaging
UniRef90	UHGV-0027466_19	UniRef90_UPI00189C53D6	816.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0027466_19	1304866.K413DRAFT_3035	467.0	0	N/A	N/A
structural_annotation	UHGV-0027466_19	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0027466_20	K06909	78.9	6.9e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0027466_20	phrog_2	87.5	2.4e-25	terminase large subunit	head and packaging
UniRef90	UHGV-0027466_20	UniRef90_UPI00189AB5B3	851.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0027466_20	1304866.K413DRAFT_3034	602.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0027466_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0027466_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0027466_20	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_21	phrog_309	136.2	9.3e-41	terminase small subunit	head and packaging
UniRef90	UHGV-0027466_21	UniRef90_UPI001B3C9B19	219.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0027466_21	693746.OBV_18020	133.0	6.78e-38	transposase activity	N/A
Pfam	UHGV-0027466_21	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0027466_21	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0027466_21	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_22	phrog_36	63.2	4.8e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027466_22	UniRef90_UPI00131A5489	70.5	0.00000000000075	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0027466_22	1120978.KB894083_gene918	57.4	0.0000000186	N/A	N/A
Pfam	UHGV-0027466_22	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0027466_22	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0027466_22	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_25	phrog_2245	74.3	1.6e-21	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0027466_25	UniRef90_A0A315Y0X2	52.0	0.00000128	MazG-like nucleotide pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-0027466_25	1232446.BAIE02000002_gene815	50.8	0.000000507	N/A	N/A
structural_annotation	UHGV-0027466_25	NF001611,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_26	phrog_8684	106.8	1e-31	N/A	unknown function
UniRef90	UHGV-0027466_26	UniRef90_A0A412ULY6	146.0	2.05991e-42	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0027466_26	397290.C810_01526	84.3	5.2e-19	YopX protein	N/A
Pfam	UHGV-0027466_26	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0027466_26	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0027466_26	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_27	phrog_1384	126.4	1.9e-37	Mom-like DNA modification protein	other
UniRef90	UHGV-0027466_27	UniRef90_W1I6Y1	142.0	2.32e-40	Uncultured bacterium extrachromosomal DNA RGI01389	N/A
eggNOG-mapper	UHGV-0027466_27	411483.FAEPRAA2165_02721	144.0	6.99949e-42	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0027466_27	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_28	phrog_2245	93.7	1.7e-27	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0027466_28	UniRef90_A0A846K3D1	57.0	0.0000000176	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0027466_28	926561.KB900623_gene754	64.3	0.00000000000367	N/A	N/A
structural_annotation	UHGV-0027466_30	NF041288,COG4830	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_31	phrog_140	60.8	3.2e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027466_31	UniRef90_A0A3D5P905	74.7	0.00000000000000315	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0027466_31	1423758.BN55_01485	61.6	0.0000000000807	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0027466_31	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0027466_31	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
KOfam	UHGV-0027466_32	K02315	158.0	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0027466_32	phrog_50	144.0	1.19951e-42	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027466_32	UniRef90_A0A285PNH4	225.0	0	AAA+ ATPase domain	N/A
eggNOG-mapper	UHGV-0027466_32	203119.Cthe_2467	224.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0027466_32	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0027466_32	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0027466_32	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0027466_32	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_33	phrog_2562	158.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027466_33	UniRef90_UPI0011DDE737	159.0	7.00649e-45	N/A	N/A
eggNOG-mapper	UHGV-0027466_33	290402.Cbei_1623	147.0	4.75993e-41	N/A	N/A
Pfam	UHGV-0027466_33	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0027466_33	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-0027466_34	K03111	133.2	2.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0027466_34	phrog_44	136.8	8.10007e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027466_34	UniRef90_R6UNN6	243.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0027466_34	1121334.KB911069_gene1617	167.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0027466_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0027466_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0027466_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0027466_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0027466_34	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_35	phrog_392	132.8	3.2e-39	metal-dependent hydrolase	other
UniRef90	UHGV-0027466_35	UniRef90_R6YG58	253.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0027466_35	665956.HMPREF1032_03101	199.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0027466_35	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0027466_35	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0027466_35	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_36	phrog_2760	201.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027466_36	UniRef90_UPI0019154C91	265.0	0	phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0027466_36	1122173.AXVL01000068_gene1414	199.0	0	DNA synthesis involved in double-strand break repair via homologous recombination	N/A
Pfam	UHGV-0027466_36	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0027466_36	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0027466_36	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0027466_36	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_37	phrog_674	147.7	7.42688e-44	N/A	unknown function
UniRef90	UHGV-0027466_37	UniRef90_A0A7X9AE52	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027466_37	1408437.JNJN01000039_gene373	176.0	0	N/A	N/A
Pfam	UHGV-0027466_37	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0027466_37	PF07083	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027466_43	742738.HMPREF9460_00848	54.3	0.0000000232	N/A	N/A
PHROG	UHGV-0027466_44	phrog_11939	102.4	1.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-0027466_44	1004785.AMBLS11_01120	84.3	8.02e-21	N/A	N/A
structural_annotation	UHGV-0027466_44	PF13031	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027466_45	UniRef90_A0A1Y4HLG9	65.9	0.000000000000971	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0027466_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027466_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0027466_45	PF08667,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0027466_47	phrog_750	80.9	1.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0027466_47	742723.HMPREF9477_00931	96.3	1.58e-24	N/A	N/A
structural_annotation	UHGV-0027466_47	PF13835,NF040858	N/A	N/A	N/A	N/A
Pfam	UHGV-0027466_49	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
KOfam	UHGV-0027466_51	K18830	47.7	0.00000000000033	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0027466_51	phrog_8	43.4	0.0000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027466_51	UniRef90_A0A1G5CKS8	155.0	0	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0027466_51	1151292.QEW_0314	103.0	1.53e-26	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0027466_51	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0027466_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0027466_51	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027466_53	PF20505,MF_00194,NF001462,COG2974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027466_54	PF15968	N/A	N/A	N/A	N/A
KOfam	UHGV-0027466_55	K22299	58.2	1.9e-16	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0027466_55	phrog_8	61.7	1.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027466_55	UniRef90_A0A374NFM5	119.0	6.31e-34	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0027466_55	930946.AEOP01000001_gene590	70.1	0.0000000000000785	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0027466_55	retron_type_VI_hth_cluster2_1	49.6	0.00000000000011	N/A	Retron
Pfam	UHGV-0027466_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027466_55	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0027466_56	K14059	97.4	2.2e-28	int; integrase	N/A
PHROG	UHGV-0027466_56	phrog_1	119.2	4.5e-35	integrase	integration and excision
UniRef90	UHGV-0027466_56	UniRef90_A0A1G5CL52	538.0	0	Phage integrase family protein	N/A
eggNOG-mapper	UHGV-0027466_56	693746.OBV_41260	202.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0027466_56	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0027466_56	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0027466_56	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A