UHGV-0027550 (vOTU-027259)

Viral Genome: UHGV-0027550

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0027550
vOTU ID	vOTU-027259
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_G_3_1732__NODE_2470_length_28826_cov_15.260079
Associated BioSample	SAMEA4766012
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	71.66 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9711
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	42.2
Jumbo phage	No

Genome content
Genome length (bp)	28,826
GC content	41.90%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	91%
Average CDS length (bps)	568.37
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.66)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0027550_2	K07339	74.6	9.8e-22	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0027550_2	phrog_353	57.4	1.8e-16	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0027550_2	UniRef90_UPI001D07D491	118.0	6.89e-34	type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-0027550_2	411460.RUMTOR_02081	92.8	1.42e-24	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0027550_2	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-0027550_2	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-0027550_2	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0027550_3	K18843	59.9	5.3e-17	hicB; antitoxin HicB	N/A
PHROG	UHGV-0027550_3	phrog_497	67.1	3.1e-19	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0027550_3	UniRef90_UPI001D0933C8	267.0	0	type II toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-0027550_3	411460.RUMTOR_02082	184.0	0	N/A	N/A
Pfam	UHGV-0027550_3	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0027550_3	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0027550_3	PF15919,COG1598	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_6	phrog_888	208.7	0	N/A	unknown function
UniRef90	UHGV-0027550_6	UniRef90_A0A6N7SSL1	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027550_6	1292035.H476_2311	172.0	0	Short C-terminal domain	N/A
Pfam	UHGV-0027550_6	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-0027550_6	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-0027550_6	PF15947,PF14471	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027550_7	1476973.JMMB01000006_gene3332	141.0	4.92977e-42	N/A	N/A
KOfam	UHGV-0027550_8	K07729	56.7	5.2e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0027550_8	phrog_8	79.6	4.9e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027550_8	UniRef90_UPI001D08933E	227.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0027550_8	697281.Mahau_2565	92.4	1.51e-22	sequence-specific DNA binding	N/A
Pfam	UHGV-0027550_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027550_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0027550_8	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027550_9	UniRef90_UPI001D05F4AB	119.0	4.37e-34	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0027550_9	883110.HMPREF9260_00684	50.4	0.000000236	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0027550_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027550_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0027550_9	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_10	phrog_3882	42.0	0.0000000000089	N/A	unknown function
PHROG	UHGV-0027550_11	phrog_2116	51.9	0.0000000000000072	N/A	unknown function
eggNOG-mapper	UHGV-0027550_11	1274524.BSONL12_05998	50.1	0.000000671	N/A	N/A
UniRef90	UHGV-0027550_15	UniRef90_UPI001D060E3A	156.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0027550_15	1029718.SFBM_0098	82.4	7.57e-20	Helix-turn-helix domain	N/A
Pfam	UHGV-0027550_15	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0027550_15	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0027550_15	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_17	phrog_15077	184.4	0	N/A	unknown function
UniRef90	UHGV-0027550_17	UniRef90_A0A1M6RQ18	285.0	0	RNA polymerase, alpha chain C terminal domain	N/A
eggNOG-mapper	UHGV-0027550_17	742765.HMPREF9457_02110	263.0	0	N/A	N/A
structural_annotation	UHGV-0027550_17	NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_18	phrog_22292	44.6	0.0000000000013	N/A	unknown function
PHROG	UHGV-0027550_21	phrog_6499	149.6	5.60519e-45	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027550_21	UniRef90_UPI001D06B611	319.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0027550_21	1121342.AUCO01000012_gene1734	146.0	1.11964e-42	sequence-specific DNA binding	N/A
COG	UHGV-0027550_21	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0027550_21	PF06892,NF040522,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_22	phrog_398	183.5	0	N/A	unknown function
UniRef90	UHGV-0027550_22	UniRef90_UPI001D07CBBD	443.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0027550_22	33035.JPJF01000122_gene2462	199.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0027550_22	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0027550_22	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_23	phrog_864	224.7	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027550_23	UniRef90_UPI001D06D732	1127.0	0	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-0027550_23	478749.BRYFOR_09102	484.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0027550_23	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0027550_23	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0027550_23	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0027550_23	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0027550_23	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0027550_23	PF02257,PF05272,PF08706,MF_01407,NF011296,COG3378	N/A	N/A	N/A	N/A
KOfam	UHGV-0027550_25	K03111	125.2	7.8e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0027550_25	phrog_44	123.3	1.9e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027550_25	UniRef90_UPI001D0765D9	284.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0027550_25	1235802.C823_01345	189.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0027550_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0027550_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0027550_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0027550_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0027550_25	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_29	phrog_119	64.3	1.7e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027550_29	UniRef90_UPI001D081DF5	249.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0027550_29	1027396.LMOSA_21361	79.3	1.54e-17	HNH nucleases	N/A
COG	UHGV-0027550_29	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0027550_30	phrog_5110	106.9	9.1e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0027550_30	UniRef90_UPI001D0732BF	233.0	0	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0027550_30	349161.Dred_2608	108.0	3.55e-29	N/A	N/A
Pfam	UHGV-0027550_30	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0027550_30	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_31	phrog_9	232.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0027550_31	UniRef90_UPI001D076CC1	1173.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0027550_31	610130.Closa_0741	776.0	0	Phage Terminase	N/A
Pfam	UHGV-0027550_31	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0027550_31	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0027550_31	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0027550_31	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_32	phrog_12	98.7	3.5e-29	portal protein	head and packaging
UniRef90	UHGV-0027550_32	UniRef90_UPI001D060193	753.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0027550_32	86416.Clopa_0339	187.0	0	Phage portal protein	N/A
Pfam	UHGV-0027550_32	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0027550_32	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0027550_32	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0027550_33	K01358	135.2	6.10001e-40	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0027550_33	phrog_94	212.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0027550_33	UniRef90_UPI001D08E902	478.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0027550_33	1232452.BAIB02000007_gene1626	203.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0027550_33	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0027550_33	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0027550_33	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_34	phrog_10	90.6	1.9e-26	major head protein	head and packaging
UniRef90	UHGV-0027550_34	UniRef90_UPI001D0860FB	762.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0027550_34	553184.ATORI0001_1179	315.0	0	Phage capsid family	N/A
Pfam	UHGV-0027550_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0027550_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0027550_34	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0027550_34	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_35	phrog_749	55.0	0.0000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0027550_35	926561.KB900622_gene644	48.1	0.00000757	N/A	N/A
structural_annotation	UHGV-0027550_35	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_36	phrog_5635	56.5	5.4e-16	head-tail adaptor	connector
UniRef90	UHGV-0027550_36	UniRef90_UPI001D098732	230.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-0027550_36	1347392.CCEZ01000045_gene13	54.3	0.0000000746	N/A	N/A
Pfam	UHGV-0027550_36	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0027550_36	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0027550_36	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027550_37	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_38	phrog_5509	92.9	2.5e-27	neck protein	connector
eggNOG-mapper	UHGV-0027550_38	1450694.BTS2_0537	66.2	0.00000000000626	N/A	N/A
structural_annotation	UHGV-0027550_38	TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027550_39	UniRef90_A0A374TPV8	131.0	2.87e-35	Phage tail protein	N/A
eggNOG-mapper	UHGV-0027550_39	1121866.AUGK01000006_gene884	122.0	1.12e-32	N/A	N/A
structural_annotation	UHGV-0027550_39	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027550_40	1384484.AEQU_1173	50.1	0.00000411	N/A	N/A
PHROG	UHGV-0027550_41	phrog_1272	281.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0027550_41	UniRef90_UPI001D06AE33	1259.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0027550_41	588581.Cpap_1264	216.0	0	Tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0027550_41	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0027550_41	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0027550_41	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027550_42	658655.HMPREF0988_02551	157.0	8.96831e-44	N/A	N/A
structural_annotation	UHGV-0027550_42	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_43	phrog_538	144.7	5.89947e-43	minor tail protein	tail
UniRef90	UHGV-0027550_43	UniRef90_UPI001D07456C	635.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0027550_43	658655.HMPREF0988_02550	204.0	0	N/A	N/A
Pfam	UHGV-0027550_43	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0027550_43	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_44	phrog_9994	93.1	1.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0027550_44	411468.CLOSCI_00275	80.1	0.00000000000000994	N/A	N/A
structural_annotation	UHGV-0027550_44	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-0027550_45	phrog_19695	76.3	6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0027550_45	1232452.BAIB02000007_gene1611	107.0	4.14e-29	N/A	N/A
structural_annotation	UHGV-0027550_45	PF19714	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027550_46	UniRef90_UPI00156D7781	185.0	0	SGNH/GDSL hydrolase family protein	N/A
eggNOG-mapper	UHGV-0027550_46	411462.DORLON_00771	142.0	1.71e-36	N/A	N/A