UHGV-0027782 (vOTU-043625)

Viral Genome: UHGV-0027782

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0027782
vOTU ID	vOTU-043625
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_K_12_1914__NODE_737_length_40069_cov_17.412207
Associated BioSample	SAMEA4766094
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9808
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	46.83
Jumbo phage	No

Genome content
Genome length (bp)	39,992
GC content	52.02%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	77
CDS density	92%
Average CDS length (bps)	478.64
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0027782_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_3	phrog_20016	166.1	0	N/A	unknown function
UniRef90	UHGV-0027782_3	UniRef90_A0A345BPX4	152.0	5.60519e-45	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0027782_3	1226322.HMPREF1545_00077	144.0	1.54003e-42	N/A	N/A
structural_annotation	UHGV-0027782_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_5	phrog_16490	142.3	3.20057e-42	N/A	unknown function
eggNOG-mapper	UHGV-0027782_5	1408437.JNJN01000043_gene803	110.0	1.64e-26	N/A	N/A
PHROG	UHGV-0027782_6	phrog_22984	67.9	1.3e-19	N/A	unknown function
PHROG	UHGV-0027782_7	phrog_21718	46.3	0.00000000000067	N/A	unknown function
UniRef90	UHGV-0027782_7	UniRef90_A0A285PT36	84.7	3.97e-18	Consensus disorder prediction	N/A
PHROG	UHGV-0027782_8	phrog_3754	104.0	1.4e-30	N/A	unknown function
eggNOG-mapper	UHGV-0027782_8	476272.RUMHYD_01764	142.0	5.58978e-42	N/A	N/A
structural_annotation	UHGV-0027782_9	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_10	phrog_10091	102.5	3.2e-30	holin	lysis
UniRef90	UHGV-0027782_10	UniRef90_A0A1Y4RHF4	128.0	5.71e-37	Phage holin	N/A
eggNOG-mapper	UHGV-0027782_10	97139.C824_05950	117.0	1.18e-33	Bacteriophage holin	N/A
Pfam	UHGV-0027782_10	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0027782_10	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0027782_10	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027782_10	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_11	phrog_937	50.8	0.000000000000034	hemolysin	other
eggNOG-mapper	UHGV-0027782_11	1297617.JPJD01000099_gene2176	50.8	0.000000697	N/A	N/A
KOfam	UHGV-0027782_12	K08640	77.7	2.1e-22	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0027782_12	phrog_894	54.3	0.0000000000000019	endolysin	lysis
UniRef90	UHGV-0027782_12	UniRef90_R5EEQ7	125.0	4.43e-32	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-0027782_12	718252.FP2_05470	55.1	0.000000533	Peptidase M15A	N/A
Pfam	UHGV-0027782_12	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0027782_12	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0027782_12	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027782_12	PF05951,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_13	phrog_2310	53.2	0.0000000000000027	N/A	unknown function
eggNOG-mapper	UHGV-0027782_13	1415774.U728_3409	54.7	0.00000000445	N/A	N/A
structural_annotation	UHGV-0027782_15	PF03425,NF038128,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_17	phrog_24103	60.8	3.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0027782_17	1118055.CAGU01000013_gene761	69.7	0.0000000000113	N/A	N/A
PHROG	UHGV-0027782_19	phrog_15594	57.1	3.2e-16	N/A	unknown function
structural_annotation	UHGV-0027782_19	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_20	phrog_9534	125.2	3.5e-37	head protein	head and packaging
UniRef90	UHGV-0027782_20	UniRef90_A0A0E0TFT0	90.5	2.21e-17	Phage-related putative tail protein	N/A
eggNOG-mapper	UHGV-0027782_20	748224.HMPREF9436_00702	92.8	7.94e-19	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0027782_21	phrog_538	104.1	1.4e-30	minor tail protein	tail
UniRef90	UHGV-0027782_21	UniRef90_UPI001C113FEF	429.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
Pfam	UHGV-0027782_21	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0027782_21	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_22	phrog_36410	55.9	5.2e-16	N/A	unknown function
UniRef90	UHGV-0027782_22	UniRef90_UPI001C0FCFFA	324.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0027782_22	536232.CLM_2045	104.0	1.35e-23	Phage tail protein	N/A
COG	UHGV-0027782_22	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0027782_22	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_23	phrog_6900	265.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0027782_23	UniRef90_A0A3D0EFB4	306.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0027782_23	1123312.KB904569_gene357	323.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-0027782_23	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0027782_26	phrog_885	69.5	4e-20	major tail protein	tail
UniRef90	UHGV-0027782_26	UniRef90_A0A843J9F0	130.0	9.75e-34	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0027782_26	1111121.HMPREF1247_0789	145.0	1.93996e-41	N/A	N/A
structural_annotation	UHGV-0027782_26	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027782_27	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_28	phrog_17977	77.5	1.2e-22	N/A	unknown function
UniRef90	UHGV-0027782_28	UniRef90_A0A285PT57	138.0	5.33001e-40	Phage head-tail joining protein	N/A
structural_annotation	UHGV-0027782_28	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_30	phrog_544	120.9	1.2e-35	major head protein	head and packaging
UniRef90	UHGV-0027782_30	UniRef90_A0A1C6B5R0	333.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0027782_30	476272.RUMHYD_01776	313.0	0	N/A	N/A
structural_annotation	UHGV-0027782_30	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027782_31	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027782_32	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_33	phrog_5	56.8	6e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0027782_33	UniRef90_UPI0005979DDC	62.4	0.000000000403	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0027782_33	1504822.CCNO01000013_gene284	64.3	0.0000000000107	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0027782_33	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0027782_33	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0027782_33	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027782_34	PF06442,MF_01194,NF000331,COG4014	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_35	phrog_115	112.3	3.6e-33	minor head protein	head and packaging
UniRef90	UHGV-0027782_35	UniRef90_A0A7X5E1T7	294.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0027782_35	1504822.CCNO01000013_gene286	203.0	0	cell adhesion	N/A
Pfam	UHGV-0027782_35	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0027782_35	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027782_35	PF04233,PF21814,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_36	phrog_64	146.2	1.30321e-43	portal protein	head and packaging
UniRef90	UHGV-0027782_36	UniRef90_A0A856HZB4	437.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0027782_36	673376.F2VHW1_9CAUD	193.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0027782_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0027782_36	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0027782_37	K06909	125.0	7.6e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0027782_37	phrog_2	159.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0027782_37	UniRef90_UPI0019584EBC	535.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0027782_37	693746.OBV_18030	518.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0027782_37	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0027782_37	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0027782_37	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0027782_37	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0027782_37	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0027782_38	K07474	135.6	6.2e-40	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0027782_38	phrog_51	137.1	9.19994e-41	terminase small subunit	head and packaging
UniRef90	UHGV-0027782_38	UniRef90_A0A3R6SKK4	178.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0027782_38	1029718.SFBM_0111	157.0	0	Terminase small subunit	N/A
Pfam	UHGV-0027782_38	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0027782_38	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0027782_38	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027782_39	445972.ANACOL_01835	52.4	0.0000000935	N/A	N/A
PHROG	UHGV-0027782_45	phrog_60	54.9	0.0000000000000015	N/A	unknown function
UniRef90	UHGV-0027782_45	UniRef90_A0A3A6ECV8	112.0	3.26e-30	N/A	N/A
eggNOG-mapper	UHGV-0027782_45	411470.RUMGNA_00214	77.8	4.08e-16	N/A	N/A
Pfam	UHGV-0027782_45	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0027782_45	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_47	phrog_3136	125.1	2.9e-37	N/A	unknown function
UniRef90	UHGV-0027782_47	UniRef90_UPI001A9A8D4F	118.0	2.54e-30	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0027782_47	97139.C824_00742	68.6	0.00000000000297	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0027782_47	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0027782_47	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0027782_47	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_49	phrog_757	95.4	5.5e-28	DNA methyltransferase	other
UniRef90	UHGV-0027782_49	UniRef90_A0A3R6ATD0	162.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0027782_49	742733.HMPREF9469_01835	156.0	1.4013e-45	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0027782_49	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0027782_50	phrog_757	51.6	0.000000000000014	DNA methyltransferase	other
UniRef90	UHGV-0027782_50	UniRef90_A0A7J2R6L5	69.7	0.00000000000000768	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0027782_50	748224.HMPREF9436_03069	102.0	9.79e-27	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0027782_50	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0027782_52	PF09889,COG4068	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_53	phrog_9804	118.5	5.4e-35	N/A	unknown function
UniRef90	UHGV-0027782_53	UniRef90_A0A174S716	193.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0027782_53	585394.RHOM_14005	123.0	1.07e-32	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0027782_53	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0027782_53	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_54	phrog_15768	52.5	1.5e-20	N/A	unknown function
UniRef90	UHGV-0027782_54	UniRef90_R6RVQ1	106.0	3.25e-24	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-0027782_54	1121344.JHZO01000003_gene982	113.0	5.22e-28	N/A	N/A
AcrCatalog	UHGV-0027782_54	cluster_14472	82.0	1.92e-20	NA	N/A
Pfam	UHGV-0027782_54	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0027782_54	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_55	phrog_190	117.9	7.7e-35	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027782_55	UniRef90_A0A3R6WN18	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027782_55	1236514.BAKL01000051_gene3708	99.8	1.49e-25	N/A	N/A
Pfam	UHGV-0027782_55	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0027782_55	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_56	phrog_18107	114.0	1.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-0027782_56	476272.RUMHYD_02831	153.0	2.66247e-44	N/A	N/A
structural_annotation	UHGV-0027782_56	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_57	phrog_2872	224.3	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027782_57	UniRef90_UPI00058FD242	281.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0027782_57	1345695.CLSA_c30180	276.0	0	AAA domain	N/A
structural_annotation	UHGV-0027782_57	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_59	phrog_253	136.2	1.90001e-40	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027782_59	UniRef90_UPI00058B3C54	125.0	1.03e-33	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0027782_59	397290.C810_05162	136.0	7.98e-39	Siphovirus Gp157	N/A
Pfam	UHGV-0027782_59	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0027782_59	PF05565	N/A	N/A	N/A	N/A
KOfam	UHGV-0027782_60	K07729	50.7	0.000000000000042	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0027782_60	phrog_2439	45.0	0.0000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027782_60	UniRef90_UPI0002EC8427	52.4	0.000000167	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0027782_60	1235794.C811_01748	53.1	0.0000000703	Putative zinc ribbon domain	N/A
PADLOC	UHGV-0027782_60	retron_type_VI_hth_cluster2_1	42.9	0.000000000014	N/A	Retron
Pfam	UHGV-0027782_60	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027782_60	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0027782_60	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027782_63	PF20432,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0027782_67	phrog_8	55.1	0.0000000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027782_67	UniRef90_A0A2V2F4F9	79.7	5.43e-17	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0027782_67	1127131.WEISSC39_00160	60.8	0.000000000243	Cro/C1-type HTH DNA-binding domain	N/A
COG	UHGV-0027782_67	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0027782_67	PF01381,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027782_68	PF13601,TIGR04176,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027782_72	1280676.AUJO01000035_gene2160	137.0	2.55e-34	N/A	N/A
Pfam	UHGV-0027782_73	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027782_73	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0027782_73	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0027782_74	K14059	137.7	1.50001e-40	int; integrase	N/A
PHROG	UHGV-0027782_74	phrog_1	135.4	5.4e-40	integrase	integration and excision
UniRef90	UHGV-0027782_74	UniRef90_A0A3D2HVQ9	389.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0027782_74	1226322.HMPREF1545_00144	132.0	6.89e-33	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0027782_74	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0027782_74	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0027782_74	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027782_76	UniRef90_A0A174XWS3	88.2	1.37e-20	Bacterial regulatory proteins, luxR family	N/A
Pfam	UHGV-0027782_76	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
Pfam	UHGV-0027782_76	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-0027782_76	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A