Viral Genome: UHGV-0028005


Overview
UHGV ID UHGV-0028005
vOTU ID vOTU-157246
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_MoBio_hadza-E-H_O_16_1933__NODE_996_length_59505_cov_18.455846
Associated BioSample SAMEA4766111
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 50.28 (Medium-quality)
Trimmed provirus No
CheckV viral markers 10
CheckV host markers 1
Recoded stop codon No
Viral Content
geNomad score 0.9739
Virus hallmark genes (geNomad) 0
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 46.96
Jumbo phage No

Genome content
Genome length (bp) 59,505
GC content 37.16%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 103
CDS density 90%
Average CDS length (bps) 522.06
Total tRNA genes 1
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 50.28)
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