UHGV-0029027 (vOTU-043960)

Viral Genome: UHGV-0029027

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0029027
vOTU ID	vOTU-043960
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_F_5_2654__NODE_1196_length_38945_cov_6.426392
Associated BioSample	SAMEA4766392
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9795
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.7
Jumbo phage	No

Genome content
Genome length (bp)	38,868
GC content	56.85%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	62
CDS density	91%
Average CDS length (bps)	571.50
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0029027_1	phrog_5	55.4	5.7e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0029027_1	UniRef90_UPI0018E4B047	68.2	0.0000000000136	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0029027_1	1280689.AUJC01000007_gene3313	67.8	0.00000000000462	Bacteriophage HK97-gp10, putative tail-component	N/A
PHROG	UHGV-0029027_2	phrog_35328	121.5	2.9e-36	N/A	unknown function
PHROG	UHGV-0029027_3	phrog_859	100.0	2.5e-29	portal protein	head and packaging
UniRef90	UHGV-0029027_3	UniRef90_A0A7X5E1T7	328.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0029027_3	1235792.C808_05364	194.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0029027_3	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0029027_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029027_3	PF04233,PF21814,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_4	phrog_64	134.8	4.79999e-40	portal protein	head and packaging
UniRef90	UHGV-0029027_4	UniRef90_A0A285PU84	412.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0029027_4	1035196.HMPREF9998_01723	82.8	0.0000000000000369	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0029027_4	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0029027_4	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0029027_5	K06909	131.0	1.2e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0029027_5	phrog_2	155.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0029027_5	UniRef90_A0A373MY72	565.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0029027_5	1120746.CCNL01000014_gene2093	506.0	0	DNA packaging	N/A
Pfam	UHGV-0029027_5	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0029027_5	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0029027_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0029027_5	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_6	phrog_309	158.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-0029027_6	UniRef90_UPI0004E202CF	149.0	4.93257e-43	transposase	N/A
eggNOG-mapper	UHGV-0029027_6	1408437.JNJN01000045_gene597	149.0	8.26766e-44	HNH endonuclease	N/A
COG	UHGV-0029027_6	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0029027_6	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0029027_7	K21527	124.5	5e-38	mom; adenine modification enzyme [EC:2.3.1.-]	N/A
PHROG	UHGV-0029027_7	phrog_1384	147.1	8.12753e-44	Mom-like DNA modification protein	other
UniRef90	UHGV-0029027_7	UniRef90_A0A1B3JI24	254.0	0	DNA modification	N/A
eggNOG-mapper	UHGV-0029027_7	619693.HMPREF6745_2515	270.0	0	N/A	N/A
structural_annotation	UHGV-0029027_7	PF16092,MF_02210,NF007025,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_8	phrog_620	129.0	3.7e-38	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029027_8	UniRef90_A0A3D3Y046	224.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0029027_8	1423724.BAMM01000023_gene1920	99.4	8.63e-23	DNA methylase	N/A
PADLOC	UHGV-0029027_8	MTase_II_00015	67.3	3.2e-19	Type II methyltransferase	RM
Pfam	UHGV-0029027_8	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0029027_8	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0029027_8	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029027_9	742738.HMPREF9460_02503	74.3	5.66e-16	N/A	N/A
structural_annotation	UHGV-0029027_9	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_11	phrog_3584	132.0	4.3e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0029027_11	1203606.HMPREF1526_00985	72.8	0.00000000000295	N/A	N/A
structural_annotation	UHGV-0029027_11	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_14	phrog_24518	56.8	3.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0029027_14	1519439.JPJG01000077_gene922	78.6	0.0000000000000032	N/A	N/A
structural_annotation	UHGV-0029027_16	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
KOfam	UHGV-0029027_17	K24174	46.4	3.6e-21	METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0029027_17	phrog_359	168.4	0	DNA methyltransferase	other
UniRef90	UHGV-0029027_17	UniRef90_A0A3D5I936	292.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0029027_17	1120971.AUCA01000037_gene2882	133.0	5.77e-37	Belongs to the MT-A70-like family	N/A
PADLOC	UHGV-0029027_17	MTase_II_00048	159.9	0	Type II methyltransferase	RM
Pfam	UHGV-0029027_17	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0029027_17	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-0029027_17	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
KOfam	UHGV-0029027_18	K00558	160.3	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0029027_18	phrog_363	247.7	0	DNA methyltransferase	other
UniRef90	UHGV-0029027_18	UniRef90_G4KRB8	335.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0029027_18	693746.OBV_01900	335.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0029027_18	MTase_II_00058	129.3	4.1e-38	Type II methyltransferase	RM
Pfam	UHGV-0029027_18	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0029027_18	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0029027_18	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0029027_18	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
Pfam	UHGV-0029027_20	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0029027_20	PF13384	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029027_22	UniRef90_R6LKB2	58.9	0.000000000575	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-0029027_22	742738.HMPREF9460_02489	50.8	0.0000001	Helix-turn-helix domain	N/A
Pfam	UHGV-0029027_22	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0029027_22	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
UniRef90	UHGV-0029027_25	UniRef90_UPI0003C0D8C8	56.6	0.00000000655	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0029027_25	1430331.EP10_02425	47.4	0.00000377	N/A	N/A
structural_annotation	UHGV-0029027_25	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0029027_26	K22300	65.5	1.3e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0029027_26	phrog_8	57.9	2.6e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0029027_26	UniRef90_A0A1Q6RKG1	135.0	3.5e-38	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0029027_26	887325.HMPREF0381_0352	102.0	3.16e-26	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0029027_26	retron_type_VI_hth_cluster2_1	41.4	0.000000000028	N/A	Retron
Pfam	UHGV-0029027_26	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0029027_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0029027_26	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0029027_28	K07729	40.2	0.000000000057	K07729; putative transcriptional regulator	N/A
Pfam	UHGV-0029027_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0029027_28	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0029027_28	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_29	phrog_10772	44.0	0.0000000000029	N/A	unknown function
UniRef90	UHGV-0029027_29	UniRef90_A0A1Q6KIC5	98.6	3.46e-24	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0029027_29	665956.HMPREF1032_00562	85.9	7.36e-20	TM2 domain	N/A
Pfam	UHGV-0029027_29	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0029027_29	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0029027_31	K14059	310.7	0	int; integrase	N/A
PHROG	UHGV-0029027_31	phrog_1	228.5	0	integrase	integration and excision
UniRef90	UHGV-0029027_31	UniRef90_UPI0019587C62	506.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0029027_31	1235797.C816_02098	393.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0029027_31	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0029027_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0029027_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0029027_31	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029027_32	1226322.HMPREF1545_00079	108.0	5.23e-29	N/A	N/A
structural_annotation	UHGV-0029027_33	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_34	phrog_20016	194.6	0	N/A	unknown function
UniRef90	UHGV-0029027_34	UniRef90_A0A285PT46	205.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0029027_34	1226322.HMPREF1545_00077	186.0	0	N/A	N/A
structural_annotation	UHGV-0029027_34	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_36	phrog_16490	130.4	1.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0029027_36	658655.HMPREF0988_00917	132.0	6.59e-35	N/A	N/A
PHROG	UHGV-0029027_37	phrog_22984	74.5	8.1e-22	N/A	unknown function
PHROG	UHGV-0029027_38	phrog_21718	105.0	6.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0029027_38	476272.RUMHYD_01768	74.3	0.0000000000000102	N/A	N/A
PHROG	UHGV-0029027_39	phrog_3754	102.8	3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0029027_39	476272.RUMHYD_01764	154.0	0	N/A	N/A
eggNOG-mapper	UHGV-0029027_40	469378.Ccur_02570	64.7	0.00000000000035	N/A	N/A
UniRef90	UHGV-0029027_43	UniRef90_A0A8D9PDT6	55.1	0.0000000342	Transcriptional regulatory protein	N/A
Pfam	UHGV-0029027_43	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
PHROG	UHGV-0029027_44	phrog_608	66.9	3.1e-19	holin	lysis
UniRef90	UHGV-0029027_44	UniRef90_UPI0019604BA7	80.5	2.59e-17	phage holin, LLH family	N/A
Pfam	UHGV-0029027_44	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0029027_44	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_45	phrog_1863	66.2	2.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0029027_45	748224.HMPREF9436_01412	98.2	4.19e-26	N/A	N/A
PHROG	UHGV-0029027_46	phrog_14030	155.8	0	N/A	unknown function
UniRef90	UHGV-0029027_46	UniRef90_A0A1Y4F0G2	195.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0029027_46	1321782.HMPREF1986_02283	182.0	0	NlpC/P60 family	N/A
Pfam	UHGV-0029027_46	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0029027_46	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0029027_46	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0029027_46	PF01471,PF05382,NF038080,NF033742,COG3409,COG0791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029027_47	1203606.HMPREF1526_01926	77.8	0.00000000000000265	N/A	N/A
KOfam	UHGV-0029027_50	K16628	58.3	2.8e-17	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0029027_50	phrog_32779	52.7	2.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0029027_50	1232443.BAIA02000078_gene14	77.4	0.00000000000501	nuclear chromosome segregation	N/A
Pfam	UHGV-0029027_50	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0029027_50	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0029027_51	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_52	phrog_26795	116.9	4.3e-35	N/A	unknown function
UniRef90	UHGV-0029027_52	UniRef90_A0A5J6T4K8	127.0	1.6e-29	Minor tail protein	N/A
eggNOG-mapper	UHGV-0029027_52	1382315.JPOI01000001_gene271	129.0	2.58e-31	N/A	N/A
structural_annotation	UHGV-0029027_52	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_53	phrog_37549	40.0	0.000000000021	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0029027_53	1195236.CTER_5103	103.0	3.96e-20	N/A	N/A
structural_annotation	UHGV-0029027_53	PF02010,PF06995,MF_04116,NF010681,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_54	phrog_6900	204.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0029027_54	UniRef90_A0A3D0EFB4	266.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0029027_54	1123312.KB904569_gene357	259.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-0029027_54	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0029027_54	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_57	phrog_885	44.2	0.0000000000017	major tail protein	tail
eggNOG-mapper	UHGV-0029027_57	1504822.CCNO01000012_gene492	182.0	0	N/A	N/A
structural_annotation	UHGV-0029027_57	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029027_58	PF11367	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029027_59	UniRef90_A0A285PT57	51.6	0.00000481	Phage head-tail joining protein	N/A
Pfam	UHGV-0029027_59	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0029027_59	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0029027_61	phrog_544	166.4	0	major head protein	head and packaging
UniRef90	UHGV-0029027_61	UniRef90_A0A810PZM2	481.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0029027_61	1347392.CCEZ01000005_gene1236	242.0	0	N/A	N/A
Pfam	UHGV-0029027_61	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0029027_61	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029027_62	UniRef90_A0A6B9SU02	89.7	7.65e-19	Fibronectin autolysin	N/A
structural_annotation	UHGV-0029027_62	PF06810	N/A	N/A	N/A	N/A